RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 TP53TG3Q9ULZ0 132 aa13.59□□□□□ -0.23
CCDC113-204ENST00000566498 LENEPQ9Y5L5 61 aa13.59□□□□□ -0.23
CCDC113-204ENST00000566498 Q6ZTI0 123 aa13.58□□□□□ -0.24
CCDC113-204ENST00000566498 LINC00612Q8N6U2 182 aa13.58□□□□□ -0.24
CCDC113-204ENST00000566498 TMEM167BQ9NRX6 74 aa13.58□□□□□ -0.24
CCDC113-204ENST00000566498 KLF12Q9Y4X4 402 aa13.58□□□□□ -0.24
CCDC113-204ENST00000566498 VPS13DQ5THJ4 4388 aa13.57□□□□□ -0.24
CCDC113-204ENST00000566498 TRGV2A0A075B6R0 118 aa13.57□□□□□ -0.24
CCDC113-204ENST00000566498 TRGV1A0A0A0MS02 117 aa13.57□□□□□ -0.24
CCDC113-204ENST00000566498 GNG5P63218 68 aa13.57□□□□□ -0.24
CCDC113-204ENST00000566498 RNF212Q495C1 297 aa13.57□□□□□ -0.24
CCDC113-204ENST00000566498 MUC21Q5SSG8 566 aa13.57□□□□□ -0.24
CCDC113-204ENST00000566498 AKR1C8PQ5T2L2 129 aa13.57□□□□□ -0.24
CCDC113-204ENST00000566498 C11orf72Q8NBR9 251 aa13.57□□□□□ -0.24
CCDC113-204ENST00000566498 TMED6Q8WW62 240 aa13.57□□□□□ -0.24
CCDC113-204ENST00000566498 ST6GAL2Q96JF0 529 aa13.57□□□□□ -0.24
CCDC113-204ENST00000566498 ATG101Q9BSB4 218 aa13.57□□□□□ -0.24
CCDC113-204ENST00000566498 KMT2AQ03164 3969 aa13.57□□□□□ -0.24
CCDC113-204ENST00000566498 M0R2N4 97 aa13.56□□□□□ -0.24
CCDC113-204ENST00000566498 SUMO1P63165 101 aaKnown RBP13.56□□□□□ -0.24
CCDC113-204ENST00000566498 TRAV8-1A0A0A6YYK1 113 aa13.55□□□□□ -0.24
CCDC113-204ENST00000566498 K7EQM0 130 aa13.55□□□□□ -0.24
CCDC113-204ENST00000566498 TCL1AP56279 114 aa13.55□□□□□ -0.24
CCDC113-204ENST00000566498 IBA57Q5T440 356 aaKnown RBP13.55□□□□□ -0.24
CCDC113-204ENST00000566498 FAM159AQ6UWV7 190 aa13.55□□□□□ -0.24
CCDC113-204ENST00000566498 SSX7Q7RTT5 188 aa13.55□□□□□ -0.24
CCDC113-204ENST00000566498 SUN5Q8TC36 379 aa13.55□□□□□ -0.24
CCDC113-204ENST00000566498 SGK494Q96LW2 274 aa13.55□□□□□ -0.24
CCDC113-204ENST00000566498 TREM1Q9NP99 234 aa13.55□□□□□ -0.24
CCDC113-204ENST00000566498 TRAV26-1A0A087WT03 109 aa13.54□□□□□ -0.24
CCDC113-204ENST00000566498 C5orf17Q8NAS9 161 aa13.54□□□□□ -0.24
CCDC113-204ENST00000566498 TMPRSS5Q9H3S3 457 aa13.54□□□□□ -0.24
CCDC113-204ENST00000566498 CYTL1Q9NRR1 136 aa13.54□□□□□ -0.24
CCDC113-204ENST00000566498 NAGKQ9UJ70 344 aa13.54□□□□□ -0.24
CCDC113-204ENST00000566498 IGLV2-18A0A075B6J9 118 aa13.53□□□□□ -0.24
CCDC113-204ENST00000566498 A0A0J9YY99 117 aa13.53□□□□□ -0.24
CCDC113-204ENST00000566498 CTXND1A0A1B0GTU2 59 aa13.53□□□□□ -0.24
CCDC113-204ENST00000566498 HOXA5P20719 270 aa13.53□□□□□ -0.24
CCDC113-204ENST00000566498 ZNF415Q09FC8 603 aa13.53□□□□□ -0.24
CCDC113-204ENST00000566498 Q6AWC8 147 aa13.53□□□□□ -0.24
CCDC113-204ENST00000566498 EPDR1Q9UM22 224 aa13.53□□□□□ -0.24
CCDC113-204ENST00000566498 SERTM2A0A1B0GWG4 89 aa13.52□□□□□ -0.25
CCDC113-204ENST00000566498 SPINK4O60575 86 aa13.52□□□□□ -0.25
CCDC113-204ENST00000566498 TCRAP04437 139 aa13.52□□□□□ -0.25
CCDC113-204ENST00000566498 ZNF726P1Q15940 193 aa13.52□□□□□ -0.25
CCDC113-204ENST00000566498 TMEM183BQ1AE95 376 aa13.52□□□□□ -0.25
CCDC113-204ENST00000566498 TMEM183AQ8IXX5 376 aa13.52□□□□□ -0.25
CCDC113-204ENST00000566498 KCNRGQ8N5I3 272 aa13.52□□□□□ -0.25
CCDC113-204ENST00000566498 TVP23CQ96ET8 276 aa13.52□□□□□ -0.25
CCDC113-204ENST00000566498 NDFIP1Q9BT67 221 aa13.52□□□□□ -0.25
CCDC113-204ENST00000566498 HMSDA8MTL9 139 aa13.51□□□□□ -0.25
CCDC113-204ENST00000566498 F6UZH7 168 aa13.51□□□□□ -0.25
CCDC113-204ENST00000566498 FGF8P55075 233 aaPredicted RBP13.51□□□□□ -0.25
CCDC113-204ENST00000566498 CCL18P55774 89 aa13.51□□□□□ -0.25
CCDC113-204ENST00000566498 LGALS9BQ3B8N2 356 aa13.51□□□□□ -0.25
CCDC113-204ENST00000566498 OR11H4Q8NGC9 324 aa13.51□□□□□ -0.25
CCDC113-204ENST00000566498 MRPL16Q9NX20 251 aaKnown RBP13.51□□□□□ -0.25
CCDC113-204ENST00000566498 MDFICQ9P1T7 246 aa13.51□□□□□ -0.25
CCDC113-204ENST00000566498 TRAV21A0A0B4J279 112 aa13.5□□□□□ -0.25
CCDC113-204ENST00000566498 A0A0D9SG52 128 aa13.5□□□□□ -0.25
CCDC113-204ENST00000566498 A0A1W2PRE2 83 aa13.5□□□□□ -0.25
CCDC113-204ENST00000566498 IFNA7P01567 189 aa13.5□□□□□ -0.25
CCDC113-204ENST00000566498 UBE2G2P60604 165 aa13.5□□□□□ -0.25
CCDC113-204ENST00000566498 PSG8Q9UQ74 426 aa13.5□□□□□ -0.25
CCDC113-204ENST00000566498 TRGV11A0A075B6L2 103 aa13.49□□□□□ -0.25
CCDC113-204ENST00000566498 GGTLC3B5MD39 225 aa13.49□□□□□ -0.25
CCDC113-204ENST00000566498 GNRH2O43555 120 aa13.49□□□□□ -0.25
CCDC113-204ENST00000566498 IGHV3-53P01767 116 aa13.49□□□□□ -0.25
CCDC113-204ENST00000566498 ZNF345Q14585 488 aa13.49□□□□□ -0.25
CCDC113-204ENST00000566498 PRNTQ86SH4 94 aa13.49□□□□□ -0.25
CCDC113-204ENST00000566498 EPPK1P58107 5090 aaKnown RBP13.48□□□□□ -0.25
CCDC113-204ENST00000566498 KANTRA0A1W2PQU2 76 aa13.48□□□□□ -0.25
CCDC113-204ENST00000566498 FAM3BP58499 235 aaPredicted RBP13.48□□□□□ -0.25
CCDC113-204ENST00000566498 FLI1Q01543 452 aaPredicted RBP13.48□□□□□ -0.25
CCDC113-204ENST00000566498 CYB561D1Q8N8Q1 229 aa13.48□□□□□ -0.25
CCDC113-204ENST00000566498 C18orf15Q96N68 181 aa13.48□□□□□ -0.25
CCDC113-204ENST00000566498 MAP1LC3B2A6NCE7 125 aa13.47□□□□□ -0.25
CCDC113-204ENST00000566498 STOML3Q8TAV4 291 aa13.47□□□□□ -0.25
CCDC113-204ENST00000566498 C8orf49Q96NF6 230 aa13.47□□□□□ -0.25
CCDC113-204ENST00000566498 SPXQ9BT56 116 aa13.47□□□□□ -0.25
CCDC113-204ENST00000566498 ZNF471Q9BX82 626 aaPredicted RBP13.47□□□□□ -0.25
CCDC113-204ENST00000566498 NKX6-2Q9C056 277 aaPredicted RBP13.47□□□□□ -0.25
CCDC113-204ENST00000566498 MAP1LC3BQ9GZQ8 125 aa13.47□□□□□ -0.25
CCDC113-204ENST00000566498 H3BNG1 76 aa13.46□□□□□ -0.25
CCDC113-204ENST00000566498 TDRG1Q3Y452 100 aa13.46□□□□□ -0.25
CCDC113-204ENST00000566498 ZFP69Q49AA0 526 aa13.46□□□□□ -0.25
CCDC113-204ENST00000566498 KCNS1Q96KK3 526 aa13.46□□□□□ -0.25
CCDC113-204ENST00000566498 LINC00479Q96M42 142 aa13.46□□□□□ -0.25
CCDC113-204ENST00000566498 SDF2L1Q9HCN8 221 aa13.46□□□□□ -0.25
CCDC113-204ENST00000566498 NACAE9PAV3 2078 aa13.45□□□□□ -0.26
CCDC113-204ENST00000566498 TRAV34A0A0B4J273 112 aa13.45□□□□□ -0.26
CCDC113-204ENST00000566498 FBLL1A6NHQ2 334 aaKnown RBP13.45□□□□□ -0.26
CCDC113-204ENST00000566498 PFDN1O60925 122 aa13.45□□□□□ -0.26
CCDC113-204ENST00000566498 GCGP01275 180 aa13.45□□□□□ -0.26
CCDC113-204ENST00000566498 IGLV2-11P01706 119 aa13.45□□□□□ -0.26
CCDC113-204ENST00000566498 FHITP49789 147 aa13.45□□□□□ -0.26
CCDC113-204ENST00000566498 PPT1P50897 306 aa13.45□□□□□ -0.26
CCDC113-204ENST00000566498 SMUG1Q53HV7 270 aa13.45□□□□□ -0.26
CCDC113-204ENST00000566498 SAPCD1Q5SSQ6 148 aa13.45□□□□□ -0.26
CCDC113-204ENST00000566498 TMEM75Q8N9X5 138 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms