RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 RPH3ALQ9UNE2 315 aa10.91□□□□□ -0.66
COMMD4-212ENST00000565517 RYR2Q92736 4967 aa10.9□□□□□ -0.66
COMMD4-212ENST00000565517 IGHV1OR15-1A0A075B7D0 117 aa10.9□□□□□ -0.66
COMMD4-212ENST00000565517 RGS13O14921 159 aa10.9□□□□□ -0.66
COMMD4-212ENST00000565517 TCRAP04437 139 aa10.9□□□□□ -0.66
COMMD4-212ENST00000565517 ATP5G1P05496 136 aa10.9□□□□□ -0.66
COMMD4-212ENST00000565517 ATP5G3P48201 142 aa10.9□□□□□ -0.66
COMMD4-212ENST00000565517 EIF5AP63241 154 aaKnown RBP10.9□□□□□ -0.66
COMMD4-212ENST00000565517 IBA57Q5T440 356 aaKnown RBP10.9□□□□□ -0.66
COMMD4-212ENST00000565517 TCTE3Q8IZS6 198 aa10.9□□□□□ -0.66
COMMD4-212ENST00000565517 C11orf72Q8NBR9 251 aa10.9□□□□□ -0.66
COMMD4-212ENST00000565517 GGTLC3B5MD39 225 aa10.89□□□□□ -0.67
COMMD4-212ENST00000565517 UMAD1C9J7I0 102 aa10.89□□□□□ -0.67
COMMD4-212ENST00000565517 K7EQM0 130 aa10.89□□□□□ -0.67
COMMD4-212ENST00000565517 GNG5P63218 68 aa10.89□□□□□ -0.67
COMMD4-212ENST00000565517 ZNF471Q9BX82 626 aaPredicted RBP10.89□□□□□ -0.67
COMMD4-212ENST00000565517 NKX6-2Q9C056 277 aaPredicted RBP10.89□□□□□ -0.67
COMMD4-212ENST00000565517 EPDR1Q9UM22 224 aa10.89□□□□□ -0.67
COMMD4-212ENST00000565517 TRAV8-1A0A0A6YYK1 113 aa10.88□□□□□ -0.67
COMMD4-212ENST00000565517 FBLL1A6NHQ2 334 aaKnown RBP10.88□□□□□ -0.67
COMMD4-212ENST00000565517 TCL1AP56279 114 aa10.88□□□□□ -0.67
COMMD4-212ENST00000565517 Q6ZQT7 251 aa10.88□□□□□ -0.67
COMMD4-212ENST00000565517 TMUB2Q71RG4 321 aa10.88□□□□□ -0.67
COMMD4-212ENST00000565517 IQCF2Q8IXL9 164 aa10.88□□□□□ -0.67
COMMD4-212ENST00000565517 TMPRSS5Q9H3S3 457 aa10.88□□□□□ -0.67
COMMD4-212ENST00000565517 GSN-AS1Q9NRJ2 163 aa10.88□□□□□ -0.67
COMMD4-212ENST00000565517 HYDINQ4G0P3 5121 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 MAP1LC3B2A6NCE7 125 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 F5H768 121 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 P0DMU3 169 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 FAM231AP0DMU4 169 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 FAM231CP0DMU5 169 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 TMEM88Q6PEY1 159 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 C15orf53Q8NAA6 179 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 STOML3Q8TAV4 291 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 TVP23CQ96ET8 276 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 C18orf15Q96N68 181 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 ATG101Q9BSB4 218 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 NDFIP1Q9BT67 221 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 MAP1LC3BQ9GZQ8 125 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 TREM1Q9NP99 234 aa10.87□□□□□ -0.67
COMMD4-212ENST00000565517 KMT2AQ03164 3969 aa10.86□□□□□ -0.67
COMMD4-212ENST00000565517 PFDN1O60925 122 aa10.86□□□□□ -0.67
COMMD4-212ENST00000565517 TPT1P13693 172 aaKnown RBP10.86□□□□□ -0.67
COMMD4-212ENST00000565517 FGF8P55075 233 aaPredicted RBP10.86□□□□□ -0.67
COMMD4-212ENST00000565517 DPPA3Q6W0C5 159 aa10.86□□□□□ -0.67
COMMD4-212ENST00000565517 CYB561D1Q8N8Q1 229 aa10.86□□□□□ -0.67
COMMD4-212ENST00000565517 TMEM75Q8N9X5 138 aa10.86□□□□□ -0.67
COMMD4-212ENST00000565517 TP53TG3Q9ULZ0 132 aa10.86□□□□□ -0.67
COMMD4-212ENST00000565517 PSG8Q9UQ74 426 aa10.86□□□□□ -0.67
COMMD4-212ENST00000565517 KLF12Q9Y4X4 402 aa10.86□□□□□ -0.67
COMMD4-212ENST00000565517 TRAV21A0A0B4J279 112 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 GAGE12BA1L429 117 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 FAM74A7A6NL05 159 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 SPINK4O60575 86 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 GAGE7O76087 117 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 IGLV2-11P01706 119 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 C1QBP02746 253 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 GAGE12FP0CL80 117 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 GAGE12GP0CL81 117 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 GAGE12IP0CL82 117 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 FHITP49789 147 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 FLI1Q01543 452 aaPredicted RBP10.85□□□□□ -0.67
COMMD4-212ENST00000565517 LGALS9BQ3B8N2 356 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 TDRG1Q3Y452 100 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 FAM159AQ6UWV7 190 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 Q6ZTI0 123 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 MBD3L1Q8WWY6 194 aa10.85□□□□□ -0.67
COMMD4-212ENST00000565517 UBE2G2P60604 165 aa10.84□□□□□ -0.67
COMMD4-212ENST00000565517 ZNF415Q09FC8 603 aa10.84□□□□□ -0.67
COMMD4-212ENST00000565517 LGALSLQ3ZCW2 172 aaPredicted RBP10.84□□□□□ -0.67
COMMD4-212ENST00000565517 MUC21Q5SSG8 566 aa10.84□□□□□ -0.67
COMMD4-212ENST00000565517 SAPCD1Q5SSQ6 148 aa10.84□□□□□ -0.67
COMMD4-212ENST00000565517 POM121L12Q8N7R1 296 aa10.84□□□□□ -0.67
COMMD4-212ENST00000565517 HIST1H2BAQ96A08 127 aa10.84□□□□□ -0.67
COMMD4-212ENST00000565517 SGK494Q96LW2 274 aa10.84□□□□□ -0.67
COMMD4-212ENST00000565517 ARL2-SNX15V9GYD0 113 aa10.84□□□□□ -0.67
COMMD4-212ENST00000565517 MUC4Q99102 2169 aa10.83□□□□□ -0.68
COMMD4-212ENST00000565517 TRGV11A0A075B6L2 103 aa10.83□□□□□ -0.68
COMMD4-212ENST00000565517 IFNA7P01567 189 aa10.83□□□□□ -0.68
COMMD4-212ENST00000565517 RNF212Q495C1 297 aa10.83□□□□□ -0.68
COMMD4-212ENST00000565517 FAM213BQ8TBF2 198 aa10.83□□□□□ -0.68
COMMD4-212ENST00000565517 TCEAL7Q9BRU2 100 aa10.83□□□□□ -0.68
COMMD4-212ENST00000565517 TRGV2A0A075B6R0 118 aa10.82□□□□□ -0.68
COMMD4-212ENST00000565517 TRGV1A0A0A0MS02 117 aa10.82□□□□□ -0.68
COMMD4-212ENST00000565517 F6UZH7 168 aa10.82□□□□□ -0.68
COMMD4-212ENST00000565517 PEX7O00628 323 aa10.82□□□□□ -0.68
COMMD4-212ENST00000565517 PPT1P50897 306 aa10.82□□□□□ -0.68
COMMD4-212ENST00000565517 EIF5AL1Q6IS14 154 aaKnown RBP10.82□□□□□ -0.68
COMMD4-212ENST00000565517 PRNTQ86SH4 94 aa10.82□□□□□ -0.68
COMMD4-212ENST00000565517 AKAP14Q86UN6 197 aa10.82□□□□□ -0.68
COMMD4-212ENST00000565517 SFT2D1Q8WV19 159 aa10.82□□□□□ -0.68
COMMD4-212ENST00000565517 KCNS1Q96KK3 526 aa10.82□□□□□ -0.68
COMMD4-212ENST00000565517 SPXQ9BT56 116 aa10.82□□□□□ -0.68
COMMD4-212ENST00000565517 MDFICQ9P1T7 246 aa10.82□□□□□ -0.68
COMMD4-212ENST00000565517 VPS13DQ5THJ4 4388 aa10.82□□□□□ -0.68
COMMD4-212ENST00000565517 H3BNG1 76 aa10.81□□□□□ -0.68
COMMD4-212ENST00000565517 RAB5CP51148 216 aa10.81□□□□□ -0.68
COMMD4-212ENST00000565517 OR5I1Q13606 314 aa10.81□□□□□ -0.68
COMMD4-212ENST00000565517 TMEM183BQ1AE95 376 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms