RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 BLNKQ8WV28 456 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 VGLL1Q99990 258 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 SLC25A2Q9BXI2 301 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 NPCDR1Q9BY65 106 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 SMIM3Q9BZL3 60 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 FUT9Q9Y231 359 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 HSPB11Q9Y547 144 aa5.87□□□□□ -1.47
CAPN3-213ENST00000565173 SMLR1H3BR10 107 aa5.86□□□□□ -1.47
CAPN3-213ENST00000565173 SIVA1O15304 175 aa5.86□□□□□ -1.47
CAPN3-213ENST00000565173 MPDU1O75352 247 aa5.86□□□□□ -1.47
CAPN3-213ENST00000565173 GPX1P07203 203 aa5.86□□□□□ -1.47
CAPN3-213ENST00000565173 ICAM4Q14773 271 aa5.86□□□□□ -1.47
CAPN3-213ENST00000565173 INO80EQ8NBZ0 244 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-213ENST00000565173 ST6GAL2Q96JF0 529 aa5.86□□□□□ -1.47
CAPN3-213ENST00000565173 ZNF492Q9P255 531 aa5.86□□□□□ -1.47
CAPN3-213ENST00000565173 TIMM9Q9Y5J7 89 aa5.86□□□□□ -1.47
CAPN3-213ENST00000565173 TNFRSF18Q9Y5U5 241 aa5.86□□□□□ -1.47
CAPN3-213ENST00000565173 DNAH8Q96JB1 4490 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 IGHV1OR15-1A0A075B7D0 117 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 PAX4O43316 350 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 NXPH4O95158 308 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 IFNA5P01569 189 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 NBEAP1P0C6P0 100 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 FUSP35637 526 aaKnown RBP eCLIP5.85□□□□□ -1.47
CAPN3-213ENST00000565173 CRYBA4P53673 196 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 FHL2Q14192 279 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 FAM122CQ6P4D5 195 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 LYPD5Q6UWN5 251 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 MIR17HGQ75NE6 70 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 FXYD5Q96DB9 178 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 AQP10Q96PS8 301 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 ATP5SQ99766 215 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 PRO0255Q9UI72 69 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 HHLA3Q9XRX5 114 aa5.85□□□□□ -1.47
CAPN3-213ENST00000565173 SRRM2Q9UQ35 2752 aaKnown RBP5.84□□□□□ -1.47
CAPN3-213ENST00000565173 G3V3Q6 166 aa5.84□□□□□ -1.47
CAPN3-213ENST00000565173 ARPC5O15511 151 aa5.84□□□□□ -1.47
CAPN3-213ENST00000565173 IGHV3-53P01767 116 aa5.84□□□□□ -1.47
CAPN3-213ENST00000565173 TMEM78Q5T7P6 136 aa5.84□□□□□ -1.47
CAPN3-213ENST00000565173 Q8TAT8 98 aa5.84□□□□□ -1.47
CAPN3-213ENST00000565173 SCGB1C1Q8TD33 95 aa5.84□□□□□ -1.47
CAPN3-213ENST00000565173 WDR61Q9GZS3 305 aaKnown RBP5.84□□□□□ -1.47
CAPN3-213ENST00000565173 OR51M1Q9H341 326 aa5.84□□□□□ -1.47
CAPN3-213ENST00000565173 AAMDCQ9H7C9 122 aa5.84□□□□□ -1.47
CAPN3-213ENST00000565173 WFDC1Q9HC57 220 aa5.84□□□□□ -1.47
CAPN3-213ENST00000565173 MRPL16Q9NX20 251 aaKnown RBP5.84□□□□□ -1.47
CAPN3-213ENST00000565173 PGPEP1Q9NXJ5 209 aa5.84□□□□□ -1.47
CAPN3-213ENST00000565173 MDFICQ9P1T7 246 aa5.84□□□□□ -1.47
CAPN3-213ENST00000565173 TNFSF18Q9UNG2 199 aa5.84□□□□□ -1.47
CAPN3-213ENST00000565173 ICOSQ9Y6W8 199 aa5.84□□□□□ -1.47
CAPN3-213ENST00000565173 MYCBP2O75592 4640 aa5.84□□□□□ -1.48
CAPN3-213ENST00000565173 TRBV7-9A0A0J9YWB2 115 aa5.83□□□□□ -1.48
CAPN3-213ENST00000565173 RNF222A6NCQ9 220 aa5.83□□□□□ -1.48
CAPN3-213ENST00000565173 C17orf112F2Z3M2 114 aa5.83□□□□□ -1.48
CAPN3-213ENST00000565173 RGS13O14921 159 aa5.83□□□□□ -1.48
CAPN3-213ENST00000565173 OR10J4P0C629 311 aa5.83□□□□□ -1.48
CAPN3-213ENST00000565173 ZNF138P52744 262 aa5.83□□□□□ -1.48
CAPN3-213ENST00000565173 XGP55808 180 aa5.83□□□□□ -1.48
CAPN3-213ENST00000565173 SLAQ13239 276 aa5.83□□□□□ -1.48
CAPN3-213ENST00000565173 MRPL23Q16540 153 aaKnown RBP5.83□□□□□ -1.48
CAPN3-213ENST00000565173 IQCF2Q8IXL9 164 aa5.83□□□□□ -1.48
CAPN3-213ENST00000565173 PHYHIPLQ96FC7 376 aa5.83□□□□□ -1.48
CAPN3-213ENST00000565173 C8orf49Q96NF6 230 aa5.83□□□□□ -1.48
CAPN3-213ENST00000565173 PAXXQ9BUH6 204 aa5.83□□□□□ -1.48
CAPN3-213ENST00000565173 MRPL32Q9BYC8 188 aaKnown RBP5.83□□□□□ -1.48
CAPN3-213ENST00000565173 KCNIP2Q9NS61 270 aa5.83□□□□□ -1.48
CAPN3-213ENST00000565173 A0A1B0GVG6 124 aa5.82□□□□□ -1.48
CAPN3-213ENST00000565173 K7EQD1 137 aa5.82□□□□□ -1.48
CAPN3-213ENST00000565173 RANP62826 216 aaKnown RBP5.82□□□□□ -1.48
CAPN3-213ENST00000565173 ZNF266Q14584 549 aa5.82□□□□□ -1.48
CAPN3-213ENST00000565173 MUC21Q5SSG8 566 aa5.82□□□□□ -1.48
CAPN3-213ENST00000565173 NEGR1Q7Z3B1 354 aa5.82□□□□□ -1.48
CAPN3-213ENST00000565173 AKAP14Q86UN6 197 aa5.82□□□□□ -1.48
CAPN3-213ENST00000565173 RASL10AQ92737 203 aa5.82□□□□□ -1.48
CAPN3-213ENST00000565173 ZNF479Q96JC4 524 aa5.82□□□□□ -1.48
CAPN3-213ENST00000565173 A0A087WTM6 91 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 BORCS7-ASMTA0A0B4J1R7 106 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 RBAKDNA6NC62 111 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 EPM2AB3EWF7 344 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 SFTA3P0C7M3 94 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 DNAH10OSP0CZ25 163 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 KRTAP10-1P60331 282 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 ZNF415Q09FC8 603 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 FFAR4Q5NUL3 377 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 Q6AWC8 147 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 WFDC10BQ8IUB3 73 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 LYPD1Q8N2G4 141 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 HSD17B11Q8NBQ5 300 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 OR11H4Q8NGC9 324 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 OR10G4Q8NGN3 311 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 ARPC5LQ9BPX5 153 aa5.81□□□□□ -1.48
CAPN3-213ENST00000565173 TRGV4A0A0C4DH28 118 aa5.8□□□□□ -1.48
CAPN3-213ENST00000565173 HMSDA8MTL9 139 aa5.8□□□□□ -1.48
CAPN3-213ENST00000565173 DIRC3C9JPN6 131 aa5.8□□□□□ -1.48
CAPN3-213ENST00000565173 TAAR5O14804 337 aa5.8□□□□□ -1.48
CAPN3-213ENST00000565173 CSN1S1P47710 185 aa5.8□□□□□ -1.48
CAPN3-213ENST00000565173 ERVFC1-1P60608 527 aa5.8□□□□□ -1.48
CAPN3-213ENST00000565173 TDRG1Q3Y452 100 aa5.8□□□□□ -1.48
CAPN3-213ENST00000565173 RPL7L1Q6DKI1 246 aaKnown RBP5.8□□□□□ -1.48
CAPN3-213ENST00000565173 CDPF1Q6NVV7 123 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms