RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 NKX6-2Q9C056 277 aaPredicted RBP12.3□□□□□ -0.44
USB1-209ENST00000564387 FAM74A7A6NL05 159 aa12.29□□□□□ -0.44
USB1-209ENST00000564387 IGLV2-11P01706 119 aa12.29□□□□□ -0.44
USB1-209ENST00000564387 LINC00612Q8N6U2 182 aa12.29□□□□□ -0.44
USB1-209ENST00000564387 TIMM8BQ9Y5J9 83 aaPredicted RBP12.29□□□□□ -0.44
USB1-209ENST00000564387 ARL2-SNX15V9GYD0 113 aa12.29□□□□□ -0.44
USB1-209ENST00000564387 DEFB131BA0A096LNP1 70 aa12.28□□□□□ -0.44
USB1-209ENST00000564387 TRAV8-1A0A0A6YYK1 113 aa12.28□□□□□ -0.44
USB1-209ENST00000564387 HTN1P15515 57 aa12.28□□□□□ -0.44
USB1-209ENST00000564387 Q6ZQT7 251 aa12.28□□□□□ -0.44
USB1-209ENST00000564387 CCDC28AQ8IWP9 274 aa12.28□□□□□ -0.44
USB1-209ENST00000564387 C9orf62Q8N4C0 152 aa12.28□□□□□ -0.44
USB1-209ENST00000564387 C11orf72Q8NBR9 251 aa12.28□□□□□ -0.44
USB1-209ENST00000564387 DNAH1Q9P2D7 4330 aa12.28□□□□□ -0.44
USB1-209ENST00000564387 RYR2Q92736 4967 aa12.28□□□□□ -0.44
USB1-209ENST00000564387 FBLL1A6NHQ2 334 aaKnown RBP12.27□□□□□ -0.45
USB1-209ENST00000564387 DAZ2Q13117 558 aaKnown RBP12.27□□□□□ -0.45
USB1-209ENST00000564387 EIF5AL1Q6IS14 154 aaKnown RBP12.27□□□□□ -0.45
USB1-209ENST00000564387 SLC51BQ86UW2 128 aa12.27□□□□□ -0.45
USB1-209ENST00000564387 IQCF2Q8IXL9 164 aa12.27□□□□□ -0.45
USB1-209ENST00000564387 EIF4E3Q8N5X7 224 aaKnown RBP12.27□□□□□ -0.45
USB1-209ENST00000564387 CYB561D1Q8N8Q1 229 aa12.27□□□□□ -0.45
USB1-209ENST00000564387 FAM213BQ8TBF2 198 aa12.27□□□□□ -0.45
USB1-209ENST00000564387 ATG101Q9BSB4 218 aa12.27□□□□□ -0.45
USB1-209ENST00000564387 APLNQ9ULZ1 77 aa12.27□□□□□ -0.45
USB1-209ENST00000564387 RPH3ALQ9UNE2 315 aa12.27□□□□□ -0.45
USB1-209ENST00000564387 K7EQM0 130 aa12.26□□□□□ -0.45
USB1-209ENST00000564387 RAB5CP51148 216 aa12.26□□□□□ -0.45
USB1-209ENST00000564387 DAD1P61803 113 aa12.26□□□□□ -0.45
USB1-209ENST00000564387 TMEM75Q8N9X5 138 aa12.26□□□□□ -0.45
USB1-209ENST00000564387 ZNF680Q8NEM1 530 aa12.26□□□□□ -0.45
USB1-209ENST00000564387 SFT2D1Q8WV19 159 aa12.26□□□□□ -0.45
USB1-209ENST00000564387 IGHV1OR15-1A0A075B7D0 117 aa12.25□□□□□ -0.45
USB1-209ENST00000564387 TRAV1-1A0A0B4J248 108 aa12.25□□□□□ -0.45
USB1-209ENST00000564387 UBE2G2P60604 165 aa12.25□□□□□ -0.45
USB1-209ENST00000564387 TDRG1Q3Y452 100 aa12.25□□□□□ -0.45
USB1-209ENST00000564387 IBA57Q5T440 356 aaKnown RBP12.25□□□□□ -0.45
USB1-209ENST00000564387 LINC00476Q8WZB0 136 aa12.25□□□□□ -0.45
USB1-209ENST00000564387 HIST1H2BAQ96A08 127 aa12.25□□□□□ -0.45
USB1-209ENST00000564387 FAM210BQ96KR6 192 aa12.25□□□□□ -0.45
USB1-209ENST00000564387 TCEAL7Q9BRU2 100 aa12.25□□□□□ -0.45
USB1-209ENST00000564387 NOP10Q9NPE3 64 aaKnown RBP12.25□□□□□ -0.45
USB1-209ENST00000564387 PSG8Q9UQ74 426 aa12.25□□□□□ -0.45
USB1-209ENST00000564387 CBY3A6NI87 242 aa12.24□□□□□ -0.45
USB1-209ENST00000564387 IGLL5B9A064 214 aa12.24□□□□□ -0.45
USB1-209ENST00000564387 H2AFB1P0C5Y9 115 aa12.24□□□□□ -0.45
USB1-209ENST00000564387 SULT1A2P50226 295 aa12.24□□□□□ -0.45
USB1-209ENST00000564387 FLI1Q01543 452 aaPredicted RBP12.24□□□□□ -0.45
USB1-209ENST00000564387 ZFP69Q49AA0 526 aa12.24□□□□□ -0.45
USB1-209ENST00000564387 TREM1Q9NP99 234 aa12.24□□□□□ -0.45
USB1-209ENST00000564387 TP53TG3Q9ULZ0 132 aa12.24□□□□□ -0.45
USB1-209ENST00000564387 ALMS1Q8TCU4 4167 aa12.24□□□□□ -0.45
USB1-209ENST00000564387 IGHV4-4A0A075B6R2 117 aa12.23□□□□□ -0.45
USB1-209ENST00000564387 RGS13O14921 159 aa12.23□□□□□ -0.45
USB1-209ENST00000564387 TCL1AP56279 114 aa12.23□□□□□ -0.45
USB1-209ENST00000564387 SGK494Q96LW2 274 aa12.23□□□□□ -0.45
USB1-209ENST00000564387 C18orf15Q96N68 181 aa12.23□□□□□ -0.45
USB1-209ENST00000564387 KLF12Q9Y4X4 402 aa12.23□□□□□ -0.45
USB1-209ENST00000564387 SNURFLB1AK76 121 aa12.22□□□□□ -0.45
USB1-209ENST00000564387 PEX7O00628 323 aa12.22□□□□□ -0.45
USB1-209ENST00000564387 IFNA7P01567 189 aa12.22□□□□□ -0.45
USB1-209ENST00000564387 DEFB130BP0DP73 79 aa12.22□□□□□ -0.45
USB1-209ENST00000564387 DEFB130AP0DP74 79 aa12.22□□□□□ -0.45
USB1-209ENST00000564387 LGALS9CQ6DKI2 356 aa12.22□□□□□ -0.45
USB1-209ENST00000564387 LINC00479Q96M42 142 aa12.22□□□□□ -0.45
USB1-209ENST00000564387 GSN-AS1Q9NRJ2 163 aa12.22□□□□□ -0.45
USB1-209ENST00000564387 TRAV21A0A0B4J279 112 aa12.21□□□□□ -0.45
USB1-209ENST00000564387 PAGE4O60829 102 aa12.21□□□□□ -0.45
USB1-209ENST00000564387 PPT1P50897 306 aa12.21□□□□□ -0.45
USB1-209ENST00000564387 SAPCD1Q5SSQ6 148 aa12.21□□□□□ -0.45
USB1-209ENST00000564387 COX8CQ7Z4L0 72 aa12.21□□□□□ -0.45
USB1-209ENST00000564387 NDFIP1Q9BT67 221 aa12.21□□□□□ -0.45
USB1-209ENST00000564387 TRBV6-1A0A0K0K1D8 114 aa12.2□□□□□ -0.46
USB1-209ENST00000564387 SPINK4O60575 86 aa12.2□□□□□ -0.46
USB1-209ENST00000564387 ZNF80P51504 273 aaPredicted RBP12.2□□□□□ -0.46
USB1-209ENST00000564387 C8orf49Q96NF6 230 aa12.2□□□□□ -0.46
USB1-209ENST00000564387 TRAV34A0A0B4J273 112 aa12.19□□□□□ -0.46
USB1-209ENST00000564387 F6UZH7 168 aa12.19□□□□□ -0.46
USB1-209ENST00000564387 ATP5G1P05496 136 aa12.19□□□□□ -0.46
USB1-209ENST00000564387 ATP5G3P48201 142 aa12.19□□□□□ -0.46
USB1-209ENST00000564387 CCL20P78556 96 aa12.19□□□□□ -0.46
USB1-209ENST00000564387 LGALS9BQ3B8N2 356 aa12.19□□□□□ -0.46
USB1-209ENST00000564387 MUC21Q5SSG8 566 aa12.19□□□□□ -0.46
USB1-209ENST00000564387 CST9LP1Q5W188 147 aa12.19□□□□□ -0.46
USB1-209ENST00000564387 FAM159AQ6UWV7 190 aa12.19□□□□□ -0.46
USB1-209ENST00000564387 PRNTQ86SH4 94 aa12.19□□□□□ -0.46
USB1-209ENST00000564387 NDUFAF3Q9BU61 184 aa12.19□□□□□ -0.46
USB1-209ENST00000564387 HYDINQ4G0P3 5121 aa12.19□□□□□ -0.46
USB1-209ENST00000564387 VPS13DQ5THJ4 4388 aa12.18□□□□□ -0.46
USB1-209ENST00000564387 PFN1P07737 140 aaKnown RBP12.18□□□□□ -0.46
USB1-209ENST00000564387 SMUG1Q53HV7 270 aa12.18□□□□□ -0.46
USB1-209ENST00000564387 Q6ZTI0 123 aa12.18□□□□□ -0.46
USB1-209ENST00000564387 Q86TA4 180 aa12.18□□□□□ -0.46
USB1-209ENST00000564387 FMC1Q96HJ9 113 aa12.18□□□□□ -0.46
USB1-209ENST00000564387 GCGP01275 180 aa12.17□□□□□ -0.46
USB1-209ENST00000564387 ZNF415Q09FC8 603 aa12.17□□□□□ -0.46
USB1-209ENST00000564387 KCNS1Q96KK3 526 aa12.17□□□□□ -0.46
USB1-209ENST00000564387 MDFICQ9P1T7 246 aa12.17□□□□□ -0.46
USB1-209ENST00000564387 C11orf21Q9P2W6 132 aa12.17□□□□□ -0.46
USB1-209ENST00000564387 ZFP30Q9Y2G7 519 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms