RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ZNF90Q03938 601 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 HIST2H2BEQ16778 126 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 TPRXLQ17RH7 258 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.16□□□□□ -2.22
CHD9-209ENST00000564255 C1orf140Q5VVS0 124 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 RPL22L1Q6P5R6 122 aaKnown RBP1.16□□□□□ -2.22
CHD9-209ENST00000564255 LYZL1Q6UWQ5 148 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 LCA10Q71F78 164 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 C10orf126Q8N4M7 172 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 MMGT1Q8N4V1 131 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 OR2T10Q8NGZ9 312 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 DCANP1Q8TF63 244 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 HIST1H2BHQ93079 126 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 MAGOHBQ96A72 148 aaKnown RBP1.16□□□□□ -2.22
CHD9-209ENST00000564255 MRPS24Q96EL2 167 aaKnown RBP1.16□□□□□ -2.22
CHD9-209ENST00000564255 OR4C12Q96R67 309 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 HIST1H2BNQ99877 126 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 HIST1H2BMQ99879 126 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 DSPPQ9NZW4 1301 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 SRCAPQ6ZRS2 3230 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 NFAT5O94916 1531 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 TJP1Q07157 1748 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 IGHV3-64A0A075B6Q5 118 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 TRAV7A0A075B6U4 112 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 IGHV1-58A0A0C4DH39 117 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 FNDC10F2Z333 226 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 M0R378 163 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 CDC42EP2O14613 210 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 CST7O76096 145 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 ZNF80P51504 273 aaPredicted RBP1.16□□□□□ -2.22
CHD9-209ENST00000564255 RPL18Q07020 188 aaKnown RBP1.16□□□□□ -2.22
CHD9-209ENST00000564255 LCN15Q6UWW0 184 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 Q6ZS52 159 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 GTF2H5Q6ZYL4 71 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 RPS19BP1Q86WX3 136 aaKnown RBP1.16□□□□□ -2.22
CHD9-209ENST00000564255 ZC2HC1AQ96GY0 325 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 NAA38Q9BRA0 125 aaKnown RBP1.16□□□□□ -2.22
CHD9-209ENST00000564255 CKLFQ9UBR5 152 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 RNF11Q9Y3C5 154 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 V9GYS6 101 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 GREB1Q4ZG55 1949 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 ARHGAP32A7KAX9 2087 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 RIC1Q4ADV7 1423 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 MYH7BA7E2Y1 1941 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 SDK2Q58EX2 2172 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 TRGV4A0A0C4DH28 118 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 A0A0D9SEW6 157 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 BBIP1A8MTZ0 92 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 ZNF727A8MUV8 499 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 H3BQF6 201 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 H3BT86 120 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 RPL28P46779 137 aaKnown RBP1.15□□□□□ -2.22
CHD9-209ENST00000564255 QRFPP83859 136 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 PLGLB1Q02325 96 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 HSD52Q0P140 79 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 DIAPH2-AS1Q14236 149 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 MEIG1Q5JSS6 88 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 TRAPPC6BQ86SZ2 158 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 GKN2Q86XP6 184 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 OR5D14Q8NGL3 314 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 BRK1Q8WUW1 75 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 MPC1Q9Y5U8 109 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 IER3IP1Q9Y5U9 82 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 MAP2P11137 1827 aaKnown RBP1.15□□□□□ -2.22
CHD9-209ENST00000564255 TRIOBPQ9H2D6 2365 aa1.15□□□□□ -2.22
CHD9-209ENST00000564255 FANCMQ8IYD8 2048 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 TRAV27A0A087WT01 109 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 IGKV1-9A0A0C4DH69 117 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 FAM236AA0A1B0GUQ0 79 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 FAM236BA0A1B0GV22 79 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 ODAMA1E959 279 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 ZNF860A6NHJ4 632 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 CCDC179H3BU77 68 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 SNAPC5O75971 98 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 MPC2O95563 127 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 TNFP01375 233 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 IGHV3-7P01780 117 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 HLA-DMBP28068 263 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 RPL22P35268 128 aaKnown RBP1.15□□□□□ -2.23
CHD9-209ENST00000564255 FOXA3P55318 350 aaPredicted RBP1.15□□□□□ -2.23
CHD9-209ENST00000564255 TPPP2P59282 170 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 ZNF791Q3KP31 576 aaPredicted RBP1.15□□□□□ -2.23
CHD9-209ENST00000564255 SPANXN3Q5MJ09 141 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 FOXI2Q6ZQN5 318 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 PHF5AQ7RTV0 110 aaKnown RBP1.15□□□□□ -2.23
CHD9-209ENST00000564255 LINC00305Q7Z4B0 112 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 C5orf17Q8NAS9 161 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 PLPP5Q8NEB5 264 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 OR10AC1Q8NH08 325 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 NAT14Q8WUY8 206 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 DERL1Q9BUN8 251 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 SNRNP25Q9BV90 132 aaKnown RBP1.15□□□□□ -2.23
CHD9-209ENST00000564255 MRPL32Q9BYC8 188 aaKnown RBP1.15□□□□□ -2.23
CHD9-209ENST00000564255 TCEAL2Q9H3H9 227 aaPredicted RBP1.15□□□□□ -2.23
CHD9-209ENST00000564255 RERGLQ9H628 205 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 RPRMQ9NS64 109 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 CCDC167Q9P0B6 97 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 COL4A5P29400 1685 aa1.15□□□□□ -2.23
CHD9-209ENST00000564255 COL5A3P25940 1745 aaPredicted RBP1.15□□□□□ -2.23
CHD9-209ENST00000564255 CEP350Q5VT06 3117 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms