RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 PRCDQ00LT1 54 aa7.19□□□□□ -1.26
AC138869.3-201ENST00000563960 MRPL51Q4U2R6 128 aaKnown RBP7.19□□□□□ -1.26
AC138869.3-201ENST00000563960 FOXC2Q99958 501 aa7.19□□□□□ -1.26
AC138869.3-201ENST00000563960 TMEM160Q9NX00 188 aa7.19□□□□□ -1.26
AC138869.3-201ENST00000563960 FASNP49327 2511 aaKnown RBP7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 TRAV25A0A0B4J276 109 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 H3BVH4 76 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 CECR9P0C854 216 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 SPRNQ5BIV9 151 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 PRNTQ86SH4 94 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 FAM90A1Q86YD7 464 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 ITLN2Q8WWU7 325 aaPredicted RBP7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 LINC01587Q99440 93 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 GCN1Q92616 2671 aaKnown RBP7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 TRAV8-2A0A0B4J237 113 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 IGHV1-18A0A0C4DH31 117 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 B9A039 149 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 SPINT2O43291 252 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 LEPP41159 167 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 TWIST1Q15672 202 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 TMEM78Q5T7P6 136 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 C1orf162Q8NEQ5 155 aaPredicted RBP7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 ASCL2Q99929 193 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 Q9H3A6 140 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 GNG12Q9UBI6 72 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 PLCE1Q9P212 2302 aa7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 USP9YO00507 2555 aaPredicted RBP7.18□□□□□ -1.26
AC138869.3-201ENST00000563960 PKDREJQ9NTG1 2253 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 AKAP6Q13023 2319 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 MAP1AP78559 2803 aaPredicted RBP7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 LINC01619G3V211 115 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 IGKV3-15P01624 115 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 KIR2DS2P43631 304 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 ADIPOQQ15848 244 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 IGKV1D-37A0A075B6S9 117 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 LOC107984640A0A0U1RRK4 108 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 SMIM9A6NGZ8 99 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 WIPF1O43516 503 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 IGHV3-48P01763 117 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 LINC00694P0DN24 101 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 CKS2P33552 79 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 UTF1Q5T230 341 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 ZNF826PQ6ZT77 177 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 OR1L8Q8NGR8 309 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 OR10J6PQ8NGY7 276 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 DNAJC30Q96LL9 226 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 TRGV9Q99603 122 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 CALYQ9NYX4 217 aa7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 MRPL35Q9NZE8 188 aaKnown RBP7.17□□□□□ -1.26
AC138869.3-201ENST00000563960 HRNRQ86YZ3 2850 aaPredicted RBP7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 IQCF6A8MYZ5 107 aa7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 C19orf84I3L1E1 186 aa7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 CELSR2Q9HCU4 2923 aa7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 TGFAP01135 160 aa7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 ORM2P19652 201 aa7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 GLRXP35754 106 aa7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 CRIP1P50238 77 aa7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 UBE2D1P51668 147 aa7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 LYZL1Q6UWQ5 148 aa7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 GOLT1AQ6ZVE7 132 aa7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 NPIPB3Q92617 1050 aa7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 RNASE6Q93091 150 aaKnown RBP7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 ODF3Q96PU9 254 aa7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 OBP2BQ9NPH6 170 aa7.16□□□□□ -1.26
AC138869.3-201ENST00000563960 LINC01546A6NGU7 62 aa7.15□□□□□ -1.26
AC138869.3-201ENST00000563960 NCBP2LA6PVI3 153 aaKnown RBP7.15□□□□□ -1.26
AC138869.3-201ENST00000563960 ATP5LO75964 103 aa7.15□□□□□ -1.26
AC138869.3-201ENST00000563960 IGLV1-44P01699 117 aa7.15□□□□□ -1.26
AC138869.3-201ENST00000563960 GP9P14770 177 aa7.15□□□□□ -1.26
AC138869.3-201ENST00000563960 ATP5IP56385 69 aaPredicted RBP7.15□□□□□ -1.26
AC138869.3-201ENST00000563960 BSPH1Q075Z2 132 aa7.15□□□□□ -1.26
AC138869.3-201ENST00000563960 C11orf53Q8IXP5 236 aa7.15□□□□□ -1.26
AC138869.3-201ENST00000563960 KLF14Q8TD94 323 aaPredicted RBP7.15□□□□□ -1.26
AC138869.3-201ENST00000563960 C21orf62Q9NYP8 219 aa7.15□□□□□ -1.26
AC138869.3-201ENST00000563960 SPG11Q96JI7 2443 aa7.15□□□□□ -1.27
AC138869.3-201ENST00000563960 A0A1W2PPI3 338 aa7.15□□□□□ -1.27
AC138869.3-201ENST00000563960 A4D1N5 150 aa7.15□□□□□ -1.27
AC138869.3-201ENST00000563960 UPK2O00526 184 aa7.15□□□□□ -1.27
AC138869.3-201ENST00000563960 CD40P25942 277 aa7.15□□□□□ -1.27
AC138869.3-201ENST00000563960 EDDM3AQ14507 147 aa7.15□□□□□ -1.27
AC138869.3-201ENST00000563960 CHCHD5Q9BSY4 110 aa7.15□□□□□ -1.27
AC138869.3-201ENST00000563960 MRPL36Q9P0J6 103 aaKnown RBP7.15□□□□□ -1.27
AC138869.3-201ENST00000563960 GAS8-AS1O95177 125 aa7.14□□□□□ -1.27
AC138869.3-201ENST00000563960 SCGB1C2P0DMR2 95 aa7.14□□□□□ -1.27
AC138869.3-201ENST00000563960 PRB4P10163 310 aaPredicted RBP7.14□□□□□ -1.27
AC138869.3-201ENST00000563960 HOXB4P17483 251 aaPredicted RBP7.14□□□□□ -1.27
AC138869.3-201ENST00000563960 RPL7P18124 248 aaKnown RBP7.14□□□□□ -1.27
AC138869.3-201ENST00000563960 TNFRSF1AP19438 455 aa7.14□□□□□ -1.27
AC138869.3-201ENST00000563960 LOXL3P58215 753 aa7.14□□□□□ -1.27
AC138869.3-201ENST00000563960 FBXL19-AS1Q494R0 122 aa7.14□□□□□ -1.27
AC138869.3-201ENST00000563960 OXLD1Q5BKU9 147 aa7.14□□□□□ -1.27
AC138869.3-201ENST00000563960 C15orf53Q8NAA6 179 aa7.14□□□□□ -1.27
AC138869.3-201ENST00000563960 OR11H6Q8NGC7 330 aa7.14□□□□□ -1.27
AC138869.3-201ENST00000563960 LEAP2Q969E1 77 aa7.14□□□□□ -1.27
AC138869.3-201ENST00000563960 POU2AF1Q16633 256 aa7.13□□□□□ -1.27
AC138869.3-201ENST00000563960 MSMPQ1L6U9 139 aa7.13□□□□□ -1.27
AC138869.3-201ENST00000563960 LYRM7Q5U5X0 104 aa7.13□□□□□ -1.27
AC138869.3-201ENST00000563960 EXOC3-AS1Q8N2X6 119 aa7.13□□□□□ -1.27
AC138869.3-201ENST00000563960 SLC25A20O43772 301 aa7.13□□□□□ -1.27
AC138869.3-201ENST00000563960 NDUFA3O95167 84 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms