RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 PSMG3Q9BT73 122 aaPredicted RBP11.52□□□□□ -0.57
HDGFL3-203ENST00000563404 TRBV19A0A075B6N1 114 aa11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 KANTRA0A1W2PQU2 76 aa11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 C7orf71A4D174 169 aa11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 KLLNB2CW77 178 aa11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 BCL2L11O43521 198 aa11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 ZNF253O75346 499 aa11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 SLC25A5P05141 298 aaKnown RBP11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 FUSP35637 526 aaKnown RBP eCLIP11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 SERF2P84101 59 aa11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 BTN1A1Q13410 526 aa11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 RPL7L1Q6DKI1 246 aaKnown RBP11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 OR1L4Q8NGR5 311 aa11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 OR2G3Q8NGZ4 309 aa11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 MRPL53Q96EL3 112 aaKnown RBP11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 LINC00467Q9BRT7 94 aa11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 AGPAT4-IT1Q9H0P7 198 aa11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 SLC39A9Q9NUM3 307 aa11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 KLF12Q9Y4X4 402 aa11.51□□□□□ -0.57
HDGFL3-203ENST00000563404 TRGV2A0A075B6R0 118 aa11.5□□□□□ -0.57
HDGFL3-203ENST00000563404 TRGV1A0A0A0MS02 117 aa11.5□□□□□ -0.57
HDGFL3-203ENST00000563404 Q6ZQT7 251 aa11.5□□□□□ -0.57
HDGFL3-203ENST00000563404 ZNF680Q8NEM1 530 aa11.5□□□□□ -0.57
HDGFL3-203ENST00000563404 PFDN5Q99471 154 aa11.5□□□□□ -0.57
HDGFL3-203ENST00000563404 FUT9Q9Y231 359 aa11.5□□□□□ -0.57
HDGFL3-203ENST00000563404 SPINK4O60575 86 aa11.49□□□□□ -0.57
HDGFL3-203ENST00000563404 ANXA2RQ3ZCQ2 193 aa11.49□□□□□ -0.57
HDGFL3-203ENST00000563404 PRR9Q5T870 116 aa11.49□□□□□ -0.57
HDGFL3-203ENST00000563404 C9orf62Q8N4C0 152 aa11.49□□□□□ -0.57
HDGFL3-203ENST00000563404 EIF4E3Q8N5X7 224 aaKnown RBP11.49□□□□□ -0.57
HDGFL3-203ENST00000563404 TP53TG3Q9ULZ0 132 aa11.49□□□□□ -0.57
HDGFL3-203ENST00000563404 TNFRSF18Q9Y5U5 241 aa11.49□□□□□ -0.57
HDGFL3-203ENST00000563404 SIVA1O15304 175 aa11.48□□□□□ -0.57
HDGFL3-203ENST00000563404 MBP02144 154 aa11.48□□□□□ -0.57
HDGFL3-203ENST00000563404 PYYP10082 97 aa11.48□□□□□ -0.57
HDGFL3-203ENST00000563404 ATP6V0CP27449 155 aa11.48□□□□□ -0.57
HDGFL3-203ENST00000563404 RNASE4P34096 147 aaKnown RBP11.48□□□□□ -0.57
HDGFL3-203ENST00000563404 EXOC3-AS1Q8N2X6 119 aa11.48□□□□□ -0.57
HDGFL3-203ENST00000563404 STOML3Q8TAV4 291 aa11.48□□□□□ -0.57
HDGFL3-203ENST00000563404 LINC00477Q96M19 166 aa11.48□□□□□ -0.57
HDGFL3-203ENST00000563404 TMEM14CQ9P0S9 112 aa11.48□□□□□ -0.57
HDGFL3-203ENST00000563404 NXPH4O95158 308 aa11.47□□□□□ -0.57
HDGFL3-203ENST00000563404 HIST1H1EP10412 219 aaKnown RBP11.47□□□□□ -0.57
HDGFL3-203ENST00000563404 CRISP2P16562 243 aa11.47□□□□□ -0.57
HDGFL3-203ENST00000563404 TCL1AP56279 114 aa11.47□□□□□ -0.57
HDGFL3-203ENST00000563404 GCSAMLQ5JQS6 135 aa11.47□□□□□ -0.57
HDGFL3-203ENST00000563404 SLC51BQ86UW2 128 aa11.47□□□□□ -0.57
HDGFL3-203ENST00000563404 HSD17B11Q8NBQ5 300 aa11.47□□□□□ -0.57
HDGFL3-203ENST00000563404 ZNF471Q9BX82 626 aaPredicted RBP11.47□□□□□ -0.57
HDGFL3-203ENST00000563404 IGKV2-40A0A087WW87 121 aaPredicted RBP11.46□□□□□ -0.57
HDGFL3-203ENST00000563404 IGKV2D-40P01614 121 aaPredicted RBP11.46□□□□□ -0.57
HDGFL3-203ENST00000563404 IGHV3-53P01767 116 aa11.46□□□□□ -0.57
HDGFL3-203ENST00000563404 SEC11BP0C7V7 166 aa11.46□□□□□ -0.57
HDGFL3-203ENST00000563404 EIF5AL1Q6IS14 154 aaKnown RBP11.46□□□□□ -0.57
HDGFL3-203ENST00000563404 ZFAND2AQ8N6M9 145 aa11.46□□□□□ -0.57
HDGFL3-203ENST00000563404 BLNKQ8WV28 456 aa11.46□□□□□ -0.57
HDGFL3-203ENST00000563404 VGLL1Q99990 258 aa11.46□□□□□ -0.57
HDGFL3-203ENST00000563404 PRELID1Q9Y255 219 aa11.46□□□□□ -0.57
HDGFL3-203ENST00000563404 PAX4O43316 350 aa11.45□□□□□ -0.58
HDGFL3-203ENST00000563404 TPT1P13693 172 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-203ENST00000563404 PDE6HQ13956 83 aa11.45□□□□□ -0.58
HDGFL3-203ENST00000563404 ACOT6Q3I5F7 207 aaPredicted RBP11.45□□□□□ -0.58
HDGFL3-203ENST00000563404 FFAR4Q5NUL3 377 aa11.45□□□□□ -0.58
HDGFL3-203ENST00000563404 C9orf47Q6ZRZ4 202 aa11.45□□□□□ -0.58
HDGFL3-203ENST00000563404 SLC25A2Q9BXI2 301 aa11.45□□□□□ -0.58
HDGFL3-203ENST00000563404 MRPL16Q9NX20 251 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-203ENST00000563404 ICOSQ9Y6W8 199 aa11.45□□□□□ -0.58
HDGFL3-203ENST00000563404 GPX1P07203 203 aa11.44□□□□□ -0.58
HDGFL3-203ENST00000563404 XGP55808 180 aa11.44□□□□□ -0.58
HDGFL3-203ENST00000563404 ICAM4Q14773 271 aa11.44□□□□□ -0.58
HDGFL3-203ENST00000563404 IBA57Q5T440 356 aaKnown RBP11.44□□□□□ -0.58
HDGFL3-203ENST00000563404 FAM167A-AS1Q96KT0 104 aa11.44□□□□□ -0.58
HDGFL3-203ENST00000563404 MRPL32Q9BYC8 188 aaKnown RBP11.44□□□□□ -0.58
HDGFL3-203ENST00000563404 EPM2AB3EWF7 344 aa11.43□□□□□ -0.58
HDGFL3-203ENST00000563404 UMAD1C9J7I0 102 aa11.43□□□□□ -0.58
HDGFL3-203ENST00000563404 CRYBA4P53673 196 aa11.43□□□□□ -0.58
HDGFL3-203ENST00000563404 FHL2Q14192 279 aa11.43□□□□□ -0.58
HDGFL3-203ENST00000563404 FAM122CQ6P4D5 195 aa11.43□□□□□ -0.58
HDGFL3-203ENST00000563404 LYPD5Q6UWN5 251 aa11.43□□□□□ -0.58
HDGFL3-203ENST00000563404 PGPEP1Q9NXJ5 209 aa11.43□□□□□ -0.58
HDGFL3-203ENST00000563404 DNAH8Q96JB1 4490 aa11.42□□□□□ -0.58
HDGFL3-203ENST00000563404 IGHV1OR15-1A0A075B7D0 117 aa11.42□□□□□ -0.58
HDGFL3-203ENST00000563404 RGS13O14921 159 aa11.42□□□□□ -0.58
HDGFL3-203ENST00000563404 NMBP08949 121 aa11.42□□□□□ -0.58
HDGFL3-203ENST00000563404 DNAH10OSP0CZ25 163 aa11.42□□□□□ -0.58
HDGFL3-203ENST00000563404 MIR17HGQ75NE6 70 aa11.42□□□□□ -0.58
HDGFL3-203ENST00000563404 LYPD1Q8N2G4 141 aa11.42□□□□□ -0.58
HDGFL3-203ENST00000563404 PHYHIPLQ96FC7 376 aa11.42□□□□□ -0.58
HDGFL3-203ENST00000563404 C8orf49Q96NF6 230 aa11.42□□□□□ -0.58
HDGFL3-203ENST00000563404 ZNF492Q9P255 531 aa11.42□□□□□ -0.58
HDGFL3-203ENST00000563404 PRO0255Q9UI72 69 aa11.42□□□□□ -0.58
HDGFL3-203ENST00000563404 MYCBP2O75592 4640 aa11.42□□□□□ -0.58
HDGFL3-203ENST00000563404 RAB5CP51148 216 aa11.41□□□□□ -0.58
HDGFL3-203ENST00000563404 NKX2-5P52952 324 aaPredicted RBP11.41□□□□□ -0.58
HDGFL3-203ENST00000563404 ERVFC1-1P60608 527 aa11.41□□□□□ -0.58
HDGFL3-203ENST00000563404 TMEM78Q5T7P6 136 aa11.41□□□□□ -0.58
HDGFL3-203ENST00000563404 OR10G4Q8NGN3 311 aa11.41□□□□□ -0.58
HDGFL3-203ENST00000563404 OR10G9Q8NGN4 311 aa11.41□□□□□ -0.58
HDGFL3-203ENST00000563404 OR10G7Q8NGN6 311 aa11.41□□□□□ -0.58
HDGFL3-203ENST00000563404 SH3BGRL3Q9H299 93 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms