RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 LENEPQ9Y5L5 61 aa19.9■□□□□ 0.78
NME3-203ENST00000563367 GAGE12BA1L429 117 aa19.89■□□□□ 0.77
NME3-203ENST00000563367 RGS13O14921 159 aa19.89■□□□□ 0.77
NME3-203ENST00000563367 GAGE7O76087 117 aa19.89■□□□□ 0.77
NME3-203ENST00000563367 GAGE12FP0CL80 117 aa19.89■□□□□ 0.77
NME3-203ENST00000563367 GAGE12GP0CL81 117 aa19.89■□□□□ 0.77
NME3-203ENST00000563367 GAGE12IP0CL82 117 aa19.89■□□□□ 0.77
NME3-203ENST00000563367 KCNRGQ8N5I3 272 aa19.89■□□□□ 0.77
NME3-203ENST00000563367 ZNF680Q8NEM1 530 aa19.89■□□□□ 0.77
NME3-203ENST00000563367 TMEM167BQ9NRX6 74 aa19.89■□□□□ 0.77
NME3-203ENST00000563367 IGHV1OR15-1A0A075B7D0 117 aa19.88■□□□□ 0.77
NME3-203ENST00000563367 TRAV8-1A0A0A6YYK1 113 aa19.88■□□□□ 0.77
NME3-203ENST00000563367 Q6ZTI0 123 aa19.88■□□□□ 0.77
NME3-203ENST00000563367 TVP23CQ96ET8 276 aa19.88■□□□□ 0.77
NME3-203ENST00000563367 CTXND1A0A1B0GTU2 59 aa19.87■□□□□ 0.77
NME3-203ENST00000563367 HMSDA8MTL9 139 aa19.87■□□□□ 0.77
NME3-203ENST00000563367 ZNF345Q14585 488 aa19.87■□□□□ 0.77
NME3-203ENST00000563367 AKR1C8PQ5T2L2 129 aa19.87■□□□□ 0.77
NME3-203ENST00000563367 POM121L12Q8N7R1 296 aa19.87■□□□□ 0.77
NME3-203ENST00000563367 ARPC5LQ9BPX5 153 aa19.87■□□□□ 0.77
NME3-203ENST00000563367 KLF12Q9Y4X4 402 aa19.87■□□□□ 0.77
NME3-203ENST00000563367 DNAH10Q8IVF4 4471 aa19.87■□□□□ 0.77
NME3-203ENST00000563367 NACAE9PAV3 2078 aa19.87■□□□□ 0.77
NME3-203ENST00000563367 GGTLC3B5MD39 225 aa19.86■□□□□ 0.77
NME3-203ENST00000563367 Q6AWC8 147 aa19.86■□□□□ 0.77
NME3-203ENST00000563367 IQCF2Q8IXL9 164 aa19.86■□□□□ 0.77
NME3-203ENST00000563367 C5orf17Q8NAS9 161 aa19.86■□□□□ 0.77
NME3-203ENST00000563367 SUMO1P63165 101 aaKnown RBP19.85■□□□□ 0.77
NME3-203ENST00000563367 MUC21Q5SSG8 566 aa19.85■□□□□ 0.77
NME3-203ENST00000563367 SGK494Q96LW2 274 aa19.85■□□□□ 0.77
NME3-203ENST00000563367 TMPRSS5Q9H3S3 457 aa19.85■□□□□ 0.77
NME3-203ENST00000563367 FRAS1Q86XX4 4008 aa19.84■□□□□ 0.77
NME3-203ENST00000563367 TCRAP04437 139 aa19.84■□□□□ 0.77
NME3-203ENST00000563367 FGF8P55075 233 aaPredicted RBP19.84■□□□□ 0.77
NME3-203ENST00000563367 TCL1AP56279 114 aa19.84■□□□□ 0.77
NME3-203ENST00000563367 C15orf53Q8NAA6 179 aa19.84■□□□□ 0.77
NME3-203ENST00000563367 IBA57Q5T440 356 aaKnown RBP19.83■□□□□ 0.77
NME3-203ENST00000563367 HOXA5P20719 270 aa19.82■□□□□ 0.76
NME3-203ENST00000563367 TREM1Q9NP99 234 aa19.82■□□□□ 0.76
NME3-203ENST00000563367 EPDR1Q9UM22 224 aa19.82■□□□□ 0.76
NME3-203ENST00000563367 MUC4Q99102 2169 aa19.82■□□□□ 0.76
NME3-203ENST00000563367 TRGV1A0A0A0MS02 117 aa19.81■□□□□ 0.76
NME3-203ENST00000563367 A0A0D9SG52 128 aa19.81■□□□□ 0.76
NME3-203ENST00000563367 F6UZH7 168 aa19.81■□□□□ 0.76
NME3-203ENST00000563367 SPINK4O60575 86 aa19.81■□□□□ 0.76
NME3-203ENST00000563367 SERTM2A0A1B0GWG4 89 aa19.8■□□□□ 0.76
NME3-203ENST00000563367 A0A1W2PRE2 83 aa19.8■□□□□ 0.76
NME3-203ENST00000563367 OR5I1Q13606 314 aa19.8■□□□□ 0.76
NME3-203ENST00000563367 UBE2DNLQ8IWF7 75 aa19.8■□□□□ 0.76
NME3-203ENST00000563367 NUDT3O95989 172 aa19.79■□□□□ 0.76
NME3-203ENST00000563367 IGLV2-11P01706 119 aa19.79■□□□□ 0.76
NME3-203ENST00000563367 UBE2G2P60604 165 aa19.79■□□□□ 0.76
NME3-203ENST00000563367 MDFICQ9P1T7 246 aa19.79■□□□□ 0.76
NME3-203ENST00000563367 MAP1LC3B2A6NCE7 125 aa19.78■□□□□ 0.76
NME3-203ENST00000563367 BCL2L11O43521 198 aa19.78■□□□□ 0.76
NME3-203ENST00000563367 FHITP49789 147 aa19.78■□□□□ 0.76
NME3-203ENST00000563367 MAP1LC3BQ9GZQ8 125 aa19.78■□□□□ 0.76
NME3-203ENST00000563367 PSG8Q9UQ74 426 aa19.78■□□□□ 0.76
NME3-203ENST00000563367 TRGV2A0A075B6R0 118 aa19.77■□□□□ 0.76
NME3-203ENST00000563367 TRAV26-1A0A087WT03 109 aa19.77■□□□□ 0.76
NME3-203ENST00000563367 ZNF415Q09FC8 603 aa19.77■□□□□ 0.76
NME3-203ENST00000563367 TMEM183BQ1AE95 376 aa19.77■□□□□ 0.76
NME3-203ENST00000563367 RNF212Q495C1 297 aa19.77■□□□□ 0.76
NME3-203ENST00000563367 FAM159AQ6UWV7 190 aa19.77■□□□□ 0.76
NME3-203ENST00000563367 TMEM183AQ8IXX5 376 aa19.77■□□□□ 0.76
NME3-203ENST00000563367 C18orf15Q96N68 181 aa19.77■□□□□ 0.76
NME3-203ENST00000563367 C8orf49Q96NF6 230 aa19.77■□□□□ 0.76
NME3-203ENST00000563367 ZNF471Q9BX82 626 aaPredicted RBP19.77■□□□□ 0.76
NME3-203ENST00000563367 MRPL16Q9NX20 251 aaKnown RBP19.77■□□□□ 0.76
NME3-203ENST00000563367 NAGKQ9UJ70 344 aa19.77■□□□□ 0.76
NME3-203ENST00000563367 KANTRA0A1W2PQU2 76 aa19.76■□□□□ 0.75
NME3-203ENST00000563367 K7EQM0 130 aa19.76■□□□□ 0.75
NME3-203ENST00000563367 Q6ZNX1 250 aa19.76■□□□□ 0.75
NME3-203ENST00000563367 CYB561D1Q8N8Q1 229 aa19.76■□□□□ 0.75
NME3-203ENST00000563367 ATG101Q9BSB4 218 aa19.76■□□□□ 0.75
NME3-203ENST00000563367 TRAV21A0A0B4J279 112 aa19.75■□□□□ 0.75
NME3-203ENST00000563367 FAM74A7A6NL05 159 aa19.75■□□□□ 0.75
NME3-203ENST00000563367 SEC11BP0C7V7 166 aa19.75■□□□□ 0.75
NME3-203ENST00000563367 TDRG1Q3Y452 100 aa19.75■□□□□ 0.75
NME3-203ENST00000563367 TMUB2Q71RG4 321 aa19.75■□□□□ 0.75
NME3-203ENST00000563367 LINC00479Q96M42 142 aa19.75■□□□□ 0.75
NME3-203ENST00000563367 A0A0J9YY99 117 aa19.74■□□□□ 0.75
NME3-203ENST00000563367 ZNF80P51504 273 aaPredicted RBP19.74■□□□□ 0.75
NME3-203ENST00000563367 FLI1Q01543 452 aaPredicted RBP19.74■□□□□ 0.75
NME3-203ENST00000563367 LGALS9BQ3B8N2 356 aa19.74■□□□□ 0.75
NME3-203ENST00000563367 PRNTQ86SH4 94 aa19.74■□□□□ 0.75
NME3-203ENST00000563367 TMEM75Q8N9X5 138 aa19.74■□□□□ 0.75
NME3-203ENST00000563367 NDFIP1Q9BT67 221 aa19.74■□□□□ 0.75
NME3-203ENST00000563367 GNRH2O43555 120 aa19.73■□□□□ 0.75
NME3-203ENST00000563367 TRGV11A0A075B6L2 103 aa19.72■□□□□ 0.75
NME3-203ENST00000563367 TRAV34A0A0B4J273 112 aa19.72■□□□□ 0.75
NME3-203ENST00000563367 M0R2N4 97 aa19.72■□□□□ 0.75
NME3-203ENST00000563367 IFNA7P01567 189 aa19.72■□□□□ 0.75
NME3-203ENST00000563367 IGLV2-18A0A075B6J9 118 aa19.71■□□□□ 0.75
NME3-203ENST00000563367 PFDN1O60925 122 aa19.7■□□□□ 0.74
NME3-203ENST00000563367 TCTE3Q8IZS6 198 aa19.7■□□□□ 0.74
NME3-203ENST00000563367 C11orf21Q9P2W6 132 aa19.7■□□□□ 0.74
NME3-203ENST00000563367 BIRC6Q9NR09 4857 aa19.69■□□□□ 0.74
NME3-203ENST00000563367 IGHV3-16A0A0C4DH30 117 aa19.69■□□□□ 0.74
NME3-203ENST00000563367 UMAD1C9J7I0 102 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms