RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 C9orf62Q8N4C0 152 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 RPP25LQ8N5L8 163 aaKnown RBP3.26□□□□□ -1.89
SMG1-206ENST00000562668 HSD17B11Q8NBQ5 300 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 INO80EQ8NBZ0 244 aaPredicted RBP3.26□□□□□ -1.89
SMG1-206ENST00000562668 STXBP6Q8NFX7 210 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 OR1L4Q8NGR5 311 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 SUN5Q8TC36 379 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 FXYD5Q96DB9 178 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 GPR82Q96P67 336 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 PFDN5Q99471 154 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 TM2D3Q9BRN9 247 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 MFFQ9GZY8 342 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 SRD5A3Q9H8P0 318 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 SLC25A22Q9H936 323 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 ZNF586Q9NXT0 402 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 TMEM14CQ9P0S9 112 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 FUT9Q9Y231 359 aa3.26□□□□□ -1.89
SMG1-206ENST00000562668 KMT2CQ8NEZ4 4911 aaKnown RBP3.26□□□□□ -1.89
SMG1-206ENST00000562668 TRBV19A0A075B6N1 114 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 A0A0D9SG52 128 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 KNCNA6PVL3 124 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 C17orf112F2Z3M2 114 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 H3BTX0 84 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 ISLRO14498 428 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 TAAR5O14804 337 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 ZNF253O75346 499 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 IFNA5P01569 189 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 SNRPCP09234 159 aaKnown RBP3.25□□□□□ -1.89
SMG1-206ENST00000562668 ZNF688P0C7X2 276 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 STAG3L2P0CL84 134 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 STAG3L3P0CL85 134 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 PYYP10082 97 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 SPP1P10451 314 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 RPL7P18124 248 aaKnown RBP3.25□□□□□ -1.89
SMG1-206ENST00000562668 M6PRP20645 277 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 PSMB3P49720 205 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 PAFAH1B2P68402 229 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 SERF2P84101 59 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 ZNF266Q14584 549 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 DEFB121Q5J5C9 76 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 FAM78BQ5VT40 261 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 PRR27Q6MZM9 219 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 AMTNQ6UX39 209 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 Q6ZRG5 221 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 TMUB2Q71RG4 321 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 AKAP14Q86UN6 197 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 RNF182Q8N6D2 247 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 CSNK1G2-AS1Q8NCQ2 148 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 NARS2Q96I59 477 aaKnown RBP3.25□□□□□ -1.89
SMG1-206ENST00000562668 MRPL32Q9BYC8 188 aaKnown RBP3.25□□□□□ -1.89
SMG1-206ENST00000562668 SAV1Q9H4B6 383 aaPredicted RBP3.25□□□□□ -1.89
SMG1-206ENST00000562668 ZNF331Q9NQX6 463 aaPredicted RBP3.25□□□□□ -1.89
SMG1-206ENST00000562668 KCNIP2Q9NS61 270 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 RPRMQ9NS64 109 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 TGP01266 2768 aa3.25□□□□□ -1.89
SMG1-206ENST00000562668 VPS13DQ5THJ4 4388 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 KIR2DL5BA0A0G2JN68 375 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 KIR2DL5BA0A0G2JPC4 375 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 A0A0J9YX75 114 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 F6UB75 175 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 H3BMM0 161 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 DNASE2O00115 360 aaPredicted RBP3.24□□□□□ -1.89
SMG1-206ENST00000562668 SEC11BP0C7V7 166 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 PRB4P10163 310 aaPredicted RBP3.24□□□□□ -1.89
SMG1-206ENST00000562668 HIST1H1EP10412 219 aaKnown RBP3.24□□□□□ -1.89
SMG1-206ENST00000562668 HLA-DRB4P13762 266 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 C4BPBP20851 252 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 GALR1P47211 349 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 MEOX2P50222 304 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 CMC4P56277 68 aaPredicted RBP3.24□□□□□ -1.89
SMG1-206ENST00000562668 PSMG4Q5JS54 123 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 LCN15Q6UWW0 184 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 BPIFA4PQ86YQ2 179 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 KIR2DL5AQ8N109 375 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 ZNF709Q8N972 641 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 OR10G4Q8NGN3 311 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 OR10G9Q8NGN4 311 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 OR10G7Q8NGN6 311 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 KIR2DL5BQ8NHK3 375 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 STOML3Q8TAV4 291 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 C11orf45Q8TAV5 145 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 SCGB1C1Q8TD33 95 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 PPP1R14BQ96C90 147 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 GNPNAT1Q96EK6 184 aaPredicted RBP3.24□□□□□ -1.89
SMG1-206ENST00000562668 PHYHIPLQ96FC7 376 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 HYLS1Q96M11 299 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 OR51M1Q9H341 326 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 HLA-DRB4X5D2U9 266 aa3.24□□□□□ -1.89
SMG1-206ENST00000562668 LOC102724200A0A096LPH7 203 aaPredicted RBP3.23□□□□□ -1.89
SMG1-206ENST00000562668 BORCS7-ASMTA0A0B4J1R7 106 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 ZNF705FA8MVS1 300 aaPredicted RBP3.23□□□□□ -1.89
SMG1-206ENST00000562668 M0R3E3 92 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 HMGB3O15347 200 aaKnown RBP3.23□□□□□ -1.89
SMG1-206ENST00000562668 CRXO43186 299 aaPredicted RBP3.23□□□□□ -1.89
SMG1-206ENST00000562668 OR10J4P0C629 311 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 NBEAP1P0C6P0 100 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 S100A7P31151 101 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 FHITP49789 147 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 NKX2-5P52952 324 aaPredicted RBP3.23□□□□□ -1.89
SMG1-206ENST00000562668 SNRPD3P62318 126 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms