RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 CST9LP1Q5W188 147 aa16.68■□□□□ 0.26
SMPD3-202ENST00000561749 CYB561D1Q8N8Q1 229 aa16.68■□□□□ 0.26
SMPD3-202ENST00000561749 TMEM263Q8WUH6 116 aaKnown RBP16.68■□□□□ 0.26
SMPD3-202ENST00000561749 ATG101Q9BSB4 218 aa16.68■□□□□ 0.26
SMPD3-202ENST00000561749 KLK5Q9Y337 293 aaPredicted RBP16.68■□□□□ 0.26
SMPD3-202ENST00000561749 LENEPQ9Y5L5 61 aa16.68■□□□□ 0.26
SMPD3-202ENST00000561749 TREM1Q9NP99 234 aa16.67■□□□□ 0.26
SMPD3-202ENST00000561749 PSG8Q9UQ74 426 aa16.67■□□□□ 0.26
SMPD3-202ENST00000561749 TRAV10A0A0B4J240 114 aa16.66■□□□□ 0.26
SMPD3-202ENST00000561749 TRAV34A0A0B4J273 112 aa16.66■□□□□ 0.26
SMPD3-202ENST00000561749 TEX48A0A1B0GUV7 120 aa16.66■□□□□ 0.26
SMPD3-202ENST00000561749 RGS13O14921 159 aa16.66■□□□□ 0.26
SMPD3-202ENST00000561749 PAGE4O60829 102 aa16.66■□□□□ 0.26
SMPD3-202ENST00000561749 ATP5G3P48201 142 aa16.66■□□□□ 0.26
SMPD3-202ENST00000561749 SULT1A2P50226 295 aa16.66■□□□□ 0.26
SMPD3-202ENST00000561749 ZNF493Q6ZR52 646 aa16.66■□□□□ 0.26
SMPD3-202ENST00000561749 PRNTQ86SH4 94 aa16.66■□□□□ 0.26
SMPD3-202ENST00000561749 LINC00479Q96M42 142 aa16.66■□□□□ 0.26
SMPD3-202ENST00000561749 BOLA1Q9Y3E2 137 aa16.66■□□□□ 0.26
SMPD3-202ENST00000561749 CBY3A6NI87 242 aa16.65■□□□□ 0.26
SMPD3-202ENST00000561749 C11orf94C9JXX5 98 aa16.65■□□□□ 0.26
SMPD3-202ENST00000561749 PEX7O00628 323 aa16.65■□□□□ 0.26
SMPD3-202ENST00000561749 IGLV2-11P01706 119 aa16.65■□□□□ 0.26
SMPD3-202ENST00000561749 RAB5CP51148 216 aa16.65■□□□□ 0.26
SMPD3-202ENST00000561749 DAD1P61803 113 aa16.65■□□□□ 0.26
SMPD3-202ENST00000561749 FLI1Q01543 452 aaPredicted RBP16.65■□□□□ 0.26
SMPD3-202ENST00000561749 MUC21Q5SSG8 566 aa16.65■□□□□ 0.26
SMPD3-202ENST00000561749 EIF4E3Q8N5X7 224 aaKnown RBP16.65■□□□□ 0.26
SMPD3-202ENST00000561749 C8orf49Q96NF6 230 aa16.65■□□□□ 0.26
SMPD3-202ENST00000561749 NOP10Q9NPE3 64 aaKnown RBP16.65■□□□□ 0.26
SMPD3-202ENST00000561749 DEFB131BA0A096LNP1 70 aa16.64■□□□□ 0.25
SMPD3-202ENST00000561749 LYRM9A8MSI8 78 aa16.64■□□□□ 0.25
SMPD3-202ENST00000561749 DEFB130BP0DP73 79 aa16.64■□□□□ 0.25
SMPD3-202ENST00000561749 DEFB130AP0DP74 79 aa16.64■□□□□ 0.25
SMPD3-202ENST00000561749 HTN3P15516 51 aa16.64■□□□□ 0.25
SMPD3-202ENST00000561749 TMEM75Q8N9X5 138 aa16.64■□□□□ 0.25
SMPD3-202ENST00000561749 C2CD4CQ8TF44 421 aa16.64■□□□□ 0.25
SMPD3-202ENST00000561749 NDFIP1Q9BT67 221 aa16.64■□□□□ 0.25
SMPD3-202ENST00000561749 NKX6-2Q9C056 277 aaPredicted RBP16.64■□□□□ 0.25
SMPD3-202ENST00000561749 TP53TG3Q9ULZ0 132 aa16.64■□□□□ 0.25
SMPD3-202ENST00000561749 TIMM8BQ9Y5J9 83 aaPredicted RBP16.64■□□□□ 0.25
SMPD3-202ENST00000561749 TENM2Q9NT68 2774 aa16.63■□□□□ 0.25
SMPD3-202ENST00000561749 IGHV1OR15-1A0A075B7D0 117 aa16.63■□□□□ 0.25
SMPD3-202ENST00000561749 CCL20P78556 96 aa16.63■□□□□ 0.25
SMPD3-202ENST00000561749 SNURFLB1AK76 121 aa16.62■□□□□ 0.25
SMPD3-202ENST00000561749 IGLL5B9A064 214 aa16.62■□□□□ 0.25
SMPD3-202ENST00000561749 Q6AWC8 147 aa16.62■□□□□ 0.25
SMPD3-202ENST00000561749 LINC00467Q9BRT7 94 aa16.62■□□□□ 0.25
SMPD3-202ENST00000561749 GSN-AS1Q9NRJ2 163 aa16.62■□□□□ 0.25
SMPD3-202ENST00000561749 NAGKQ9UJ70 344 aa16.62■□□□□ 0.25
SMPD3-202ENST00000561749 ALKAL2Q6UX46 152 aa16.61■□□□□ 0.25
SMPD3-202ENST00000561749 HIST1H2BAQ96A08 127 aa16.61■□□□□ 0.25
SMPD3-202ENST00000561749 ARL2-SNX15V9GYD0 113 aa16.61■□□□□ 0.25
SMPD3-202ENST00000561749 PPT1P50897 306 aa16.6■□□□□ 0.25
SMPD3-202ENST00000561749 ANXA2RQ3ZCQ2 193 aa16.6■□□□□ 0.25
SMPD3-202ENST00000561749 C11orf72Q8NBR9 251 aa16.6■□□□□ 0.25
SMPD3-202ENST00000561749 GNG13Q9P2W3 67 aa16.6■□□□□ 0.25
SMPD3-202ENST00000561749 LCE6AA0A183 80 aa16.59■□□□□ 0.25
SMPD3-202ENST00000561749 ZNF80P51504 273 aaPredicted RBP16.59■□□□□ 0.25
SMPD3-202ENST00000561749 Q86TA4 180 aa16.59■□□□□ 0.25
SMPD3-202ENST00000561749 ZNF680Q8NEM1 530 aa16.59■□□□□ 0.25
SMPD3-202ENST00000561749 KLF12Q9Y4X4 402 aa16.59■□□□□ 0.25
SMPD3-202ENST00000561749 TRAV1-1A0A0B4J248 108 aa16.58■□□□□ 0.24
SMPD3-202ENST00000561749 TRAV21A0A0B4J279 112 aa16.58■□□□□ 0.24
SMPD3-202ENST00000561749 GCGP01275 180 aa16.58■□□□□ 0.24
SMPD3-202ENST00000561749 GAGE12BA1L429 117 aa16.57■□□□□ 0.24
SMPD3-202ENST00000561749 FBLL1A6NHQ2 334 aaKnown RBP16.57■□□□□ 0.24
SMPD3-202ENST00000561749 GAGE7O76087 117 aa16.57■□□□□ 0.24
SMPD3-202ENST00000561749 GAGE12FP0CL80 117 aa16.57■□□□□ 0.24
SMPD3-202ENST00000561749 GAGE12GP0CL81 117 aa16.57■□□□□ 0.24
SMPD3-202ENST00000561749 GAGE12IP0CL82 117 aa16.57■□□□□ 0.24
SMPD3-202ENST00000561749 AKR1C3P42330 323 aa16.57■□□□□ 0.24
SMPD3-202ENST00000561749 TMEM183BQ1AE95 376 aa16.57■□□□□ 0.24
SMPD3-202ENST00000561749 FAM159AQ6UWV7 190 aa16.57■□□□□ 0.24
SMPD3-202ENST00000561749 TMEM183AQ8IXX5 376 aa16.57■□□□□ 0.24
SMPD3-202ENST00000561749 IGHV4-4A0A075B6R2 117 aa16.56■□□□□ 0.24
SMPD3-202ENST00000561749 SCO2A0A1W2PP80 73 aa16.56■□□□□ 0.24
SMPD3-202ENST00000561749 TEX46H3BTG2 121 aa16.56■□□□□ 0.24
SMPD3-202ENST00000561749 SMUG1Q53HV7 270 aa16.56■□□□□ 0.24
SMPD3-202ENST00000561749 SAPCD1Q5SSQ6 148 aa16.56■□□□□ 0.24
SMPD3-202ENST00000561749 TCL1AP56279 114 aa16.55■□□□□ 0.24
SMPD3-202ENST00000561749 UBE2G1P62253 170 aa16.55■□□□□ 0.24
SMPD3-202ENST00000561749 DAZ2Q13117 558 aaKnown RBP16.55■□□□□ 0.24
SMPD3-202ENST00000561749 Q6ZTI0 123 aa16.55■□□□□ 0.24
SMPD3-202ENST00000561749 TCEAL7Q9BRU2 100 aa16.55■□□□□ 0.24
SMPD3-202ENST00000561749 MANBALQ9NQG1 85 aa16.55■□□□□ 0.24
SMPD3-202ENST00000561749 MDFICQ9P1T7 246 aa16.55■□□□□ 0.24
SMPD3-202ENST00000561749 KMT2CQ8NEZ4 4911 aaKnown RBP16.54■□□□□ 0.24
SMPD3-202ENST00000561749 ZNF415Q09FC8 603 aa16.54■□□□□ 0.24
SMPD3-202ENST00000561749 IBA57Q5T440 356 aaKnown RBP16.54■□□□□ 0.24
SMPD3-202ENST00000561749 FMC1Q96HJ9 113 aa16.54■□□□□ 0.24
SMPD3-202ENST00000561749 APLNQ9ULZ1 77 aa16.54■□□□□ 0.24
SMPD3-202ENST00000561749 TRGV1A0A0A0MS02 117 aa16.53■□□□□ 0.24
SMPD3-202ENST00000561749 GNRH2O43555 120 aa16.53■□□□□ 0.24
SMPD3-202ENST00000561749 LINC00612Q8N6U2 182 aa16.53■□□□□ 0.24
SMPD3-202ENST00000561749 C11orf21Q9P2W6 132 aa16.53■□□□□ 0.24
SMPD3-202ENST00000561749 TRGV11A0A075B6L2 103 aa16.52■□□□□ 0.24
SMPD3-202ENST00000561749 F5H768 121 aa16.52■□□□□ 0.24
SMPD3-202ENST00000561749 ATP5G1P05496 136 aa16.52■□□□□ 0.24
SMPD3-202ENST00000561749 PFN1P07737 140 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms