RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 ANKRD39Q53RE8 183 aa17.22■□□□□ 0.35
TMEM249-201ENST00000561638 SGK494Q96LW2 274 aa17.22■□□□□ 0.35
TMEM249-201ENST00000561638 YPEL4Q96NS1 127 aa17.22■□□□□ 0.35
TMEM249-201ENST00000561638 NPIPB6E9PJ23 425 aa17.21■□□□□ 0.35
TMEM249-201ENST00000561638 HIST3H2BBQ8N257 126 aa17.21■□□□□ 0.35
TMEM249-201ENST00000561638 CEBPGP53567 150 aa17.2■□□□□ 0.34
TMEM249-201ENST00000561638 UBE2G1P62253 170 aa17.2■□□□□ 0.34
TMEM249-201ENST00000561638 C9orf47Q6ZRZ4 202 aa17.2■□□□□ 0.34
TMEM249-201ENST00000561638 TRPT1Q86TN4 253 aaKnown RBP17.2■□□□□ 0.34
TMEM249-201ENST00000561638 LINC00479Q96M42 142 aa17.2■□□□□ 0.34
TMEM249-201ENST00000561638 AGPAT4-IT1Q9H0P7 198 aa17.2■□□□□ 0.34
TMEM249-201ENST00000561638 GCGP01275 180 aa17.2■□□□□ 0.34
TMEM249-201ENST00000561638 Q8TAT8 98 aa17.2■□□□□ 0.34
TMEM249-201ENST00000561638 LINC00477Q96M19 166 aa17.2■□□□□ 0.34
TMEM249-201ENST00000561638 TRAV34A0A0B4J273 112 aa17.19■□□□□ 0.34
TMEM249-201ENST00000561638 TMEM75Q8N9X5 138 aa17.19■□□□□ 0.34
TMEM249-201ENST00000561638 ZNF138P52744 262 aa17.18■□□□□ 0.34
TMEM249-201ENST00000561638 DEFB121Q5J5C9 76 aa17.18■□□□□ 0.34
TMEM249-201ENST00000561638 LOC102724200A0A096LPH7 203 aaPredicted RBP17.17■□□□□ 0.34
TMEM249-201ENST00000561638 K7EIL1 84 aa17.17■□□□□ 0.34
TMEM249-201ENST00000561638 LINC00614P0C842 121 aa17.17■□□□□ 0.34
TMEM249-201ENST00000561638 GAGE1Q13065 139 aa17.17■□□□□ 0.34
TMEM249-201ENST00000561638 JOSD1Q15040 202 aaPredicted RBP17.17■□□□□ 0.34
TMEM249-201ENST00000561638 PRNTQ86SH4 94 aa17.17■□□□□ 0.34
TMEM249-201ENST00000561638 C11orf52Q96A22 123 aa17.17■□□□□ 0.34
TMEM249-201ENST00000561638 FMC1Q96HJ9 113 aa17.17■□□□□ 0.34
TMEM249-201ENST00000561638 PACRGQ96M98 296 aaPredicted RBP17.17■□□□□ 0.34
TMEM249-201ENST00000561638 CT45A10P0DMU9 189 aa17.17■□□□□ 0.34
TMEM249-201ENST00000561638 FBLL1A6NHQ2 334 aaKnown RBP17.16■□□□□ 0.34
TMEM249-201ENST00000561638 C9JQL5 133 aa17.16■□□□□ 0.34
TMEM249-201ENST00000561638 TMEM250H0YL14 139 aa17.16■□□□□ 0.34
TMEM249-201ENST00000561638 NDFIP1Q9BT67 221 aa17.16■□□□□ 0.34
TMEM249-201ENST00000561638 DERL1Q9BUN8 251 aa17.16■□□□□ 0.34
TMEM249-201ENST00000561638 TMEM242Q9NWH2 141 aa17.16■□□□□ 0.34
TMEM249-201ENST00000561638 ZNF492Q9P255 531 aa17.16■□□□□ 0.34
TMEM249-201ENST00000561638 PSG8Q9UQ74 426 aa17.16■□□□□ 0.34
TMEM249-201ENST00000561638 RBMY1BA6NDE4 496 aaKnown RBP17.15■□□□□ 0.34
TMEM249-201ENST00000561638 RBMY1EA6NEQ0 496 aaKnown RBP17.15■□□□□ 0.34
TMEM249-201ENST00000561638 RBMY1DP0C7P1 496 aaKnown RBP17.15■□□□□ 0.34
TMEM249-201ENST00000561638 FXYD7P58549 80 aa17.15■□□□□ 0.34
TMEM249-201ENST00000561638 PNRC1Q12796 327 aaPredicted RBP17.15■□□□□ 0.34
TMEM249-201ENST00000561638 TVP23CQ96ET8 276 aa17.15■□□□□ 0.34
TMEM249-201ENST00000561638 ASCL2Q99929 193 aa17.15■□□□□ 0.34
TMEM249-201ENST00000561638 IGLV2-11P01706 119 aa17.15■□□□□ 0.34
TMEM249-201ENST00000561638 TMEM183BQ1AE95 376 aa17.15■□□□□ 0.34
TMEM249-201ENST00000561638 SPINK13Q1W4C9 94 aa17.15■□□□□ 0.34
TMEM249-201ENST00000561638 CLUHP3Q96NS8 147 aa17.15■□□□□ 0.34
TMEM249-201ENST00000561638 IFITM10A6NMD0 228 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 A8MZ25 164 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 J3KRW8 73 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 M0R143 59 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 M0R2Z0 102 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 HIST1H2BKO60814 126 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 HIST1H2BJP06899 126 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 FRMD6-AS1P0C7T7 363 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 HIST1H2BOP23527 126 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 TSPOP30536 169 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 HIST1H2BBP33778 126 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 APOC4P55056 127 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 HIST1H2BDP58876 126 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 HIST1H2BCP62807 126 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 HIST2H2BEQ16778 126 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.14■□□□□ 0.33
TMEM249-201ENST00000561638 AMTNQ6UX39 209 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 HIST1H2BHQ93079 126 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 HIST1H2BNQ99877 126 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 HIST1H2BMQ99879 126 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 NIPSNAP3BQ9BS92 247 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 KLF12Q9Y4X4 402 aa17.14■□□□□ 0.33
TMEM249-201ENST00000561638 SRP19P09132 144 aaKnown RBP17.13■□□□□ 0.33
TMEM249-201ENST00000561638 MORN3Q6PF18 240 aaPredicted RBP17.13■□□□□ 0.33
TMEM249-201ENST00000561638 Q86TA4 180 aa17.13■□□□□ 0.33
TMEM249-201ENST00000561638 MRAPQ8TCY5 172 aa17.13■□□□□ 0.33
TMEM249-201ENST00000561638 A8MTW9 85 aa17.12■□□□□ 0.33
TMEM249-201ENST00000561638 CA1P00915 261 aaPredicted RBP17.12■□□□□ 0.33
TMEM249-201ENST00000561638 LEPP41159 167 aa17.12■□□□□ 0.33
TMEM249-201ENST00000561638 CDKN1BP46527 198 aa17.12■□□□□ 0.33
TMEM249-201ENST00000561638 ODF3Q96PU9 254 aa17.12■□□□□ 0.33
TMEM249-201ENST00000561638 CSTL1Q9H114 145 aa17.12■□□□□ 0.33
TMEM249-201ENST00000561638 ELOBQ15370 118 aa17.12■□□□□ 0.33
TMEM249-201ENST00000561638 DNAH3Q8TD57 4116 aa17.11■□□□□ 0.33
TMEM249-201ENST00000561638 FABP4P15090 132 aa17.11■□□□□ 0.33
TMEM249-201ENST00000561638 SAPCD1Q5SSQ6 148 aa17.11■□□□□ 0.33
TMEM249-201ENST00000561638 TMEM183AQ8IXX5 376 aa17.11■□□□□ 0.33
TMEM249-201ENST00000561638 PARLQ9H300 379 aa17.11■□□□□ 0.33
TMEM249-201ENST00000561638 XCL2Q9UBD3 114 aa17.11■□□□□ 0.33
TMEM249-201ENST00000561638 LENEPQ9Y5L5 61 aa17.11■□□□□ 0.33
TMEM249-201ENST00000561638 KIR2DL5BA0A0G2JN68 375 aa17.1■□□□□ 0.33
TMEM249-201ENST00000561638 KIR2DL5BA0A0G2JPC4 375 aa17.1■□□□□ 0.33
TMEM249-201ENST00000561638 GPX1P07203 203 aa17.1■□□□□ 0.33
TMEM249-201ENST00000561638 KIR2DL5AQ8N109 375 aa17.1■□□□□ 0.33
TMEM249-201ENST00000561638 KIR2DL5BQ8NHK3 375 aa17.1■□□□□ 0.33
TMEM249-201ENST00000561638 C1QTNF4Q9BXJ3 329 aa17.1■□□□□ 0.33
TMEM249-201ENST00000561638 TRAV12-2A0A075B6T6 113 aa17.1■□□□□ 0.33
TMEM249-201ENST00000561638 GNG4P50150 75 aa17.1■□□□□ 0.33
TMEM249-201ENST00000561638 CENPWQ5EE01 88 aa17.1■□□□□ 0.33
TMEM249-201ENST00000561638 BAGE2Q86Y30 109 aa17.1■□□□□ 0.33
TMEM249-201ENST00000561638 ZFP30Q9Y2G7 519 aa17.1■□□□□ 0.33
TMEM249-201ENST00000561638 TRBV7-9A0A0J9YWB2 115 aa17.09■□□□□ 0.33
TMEM249-201ENST00000561638 LTAP01374 205 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms