RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 DYNC1H1Q14204 4646 aaKnown RBP11.95□□□□□ -0.5
CDC42BPB-208ENST00000561271 NBDYA0A0U1RRE5 68 aa11.95□□□□□ -0.5
CDC42BPB-208ENST00000561271 DIRC3C9JPN6 131 aa11.95□□□□□ -0.5
CDC42BPB-208ENST00000561271 MUC21Q5SSG8 566 aa11.95□□□□□ -0.5
CDC42BPB-208ENST00000561271 IBA57Q5T440 356 aaKnown RBP11.95□□□□□ -0.5
CDC42BPB-208ENST00000561271 OTORQ9NRC9 128 aa11.95□□□□□ -0.5
CDC42BPB-208ENST00000561271 MRPL16Q9NX20 251 aaKnown RBP11.95□□□□□ -0.5
CDC42BPB-208ENST00000561271 DNAH11Q96DT5 4516 aa11.95□□□□□ -0.5
CDC42BPB-208ENST00000561271 TRBV7-9A0A0J9YWB2 115 aa11.94□□□□□ -0.5
CDC42BPB-208ENST00000561271 A0A1W2PPV4 95 aa11.94□□□□□ -0.5
CDC42BPB-208ENST00000561271 SPINK4O60575 86 aa11.94□□□□□ -0.5
CDC42BPB-208ENST00000561271 ZNF266Q14584 549 aa11.94□□□□□ -0.5
CDC42BPB-208ENST00000561271 HSD17B11Q8NBQ5 300 aa11.94□□□□□ -0.5
CDC42BPB-208ENST00000561271 ZNF415Q09FC8 603 aa11.93□□□□□ -0.5
CDC42BPB-208ENST00000561271 PQLC2Q6ZP29 291 aa11.93□□□□□ -0.5
CDC42BPB-208ENST00000561271 OR10G4Q8NGN3 311 aa11.93□□□□□ -0.5
CDC42BPB-208ENST00000561271 OR10G9Q8NGN4 311 aa11.93□□□□□ -0.5
CDC42BPB-208ENST00000561271 OR10G7Q8NGN6 311 aa11.93□□□□□ -0.5
CDC42BPB-208ENST00000561271 VSIG2Q96IQ7 327 aa11.93□□□□□ -0.5
CDC42BPB-208ENST00000561271 C18orf15Q96N68 181 aa11.93□□□□□ -0.5
CDC42BPB-208ENST00000561271 AQP10Q96PS8 301 aa11.93□□□□□ -0.5
CDC42BPB-208ENST00000561271 PGPA6NDG6 321 aa11.92□□□□□ -0.5
CDC42BPB-208ENST00000561271 H3BNG1 76 aa11.92□□□□□ -0.5
CDC42BPB-208ENST00000561271 IGHV3-53P01767 116 aa11.92□□□□□ -0.5
CDC42BPB-208ENST00000561271 ARL14EPLP0DKL9 152 aa11.92□□□□□ -0.5
CDC42BPB-208ENST00000561271 CDC34P49427 236 aaPredicted RBP11.92□□□□□ -0.5
CDC42BPB-208ENST00000561271 Q5BKY6 102 aa11.92□□□□□ -0.5
CDC42BPB-208ENST00000561271 CMTM2Q8TAZ6 248 aa11.92□□□□□ -0.5
CDC42BPB-208ENST00000561271 GNG5P63218 68 aa11.91□□□□□ -0.5
CDC42BPB-208ENST00000561271 ESRGQ1W209 222 aa11.91□□□□□ -0.5
CDC42BPB-208ENST00000561271 Q6AWC8 147 aa11.91□□□□□ -0.5
CDC42BPB-208ENST00000561271 GOLT1AQ6ZVE7 132 aa11.91□□□□□ -0.5
CDC42BPB-208ENST00000561271 OR2G3Q8NGZ4 309 aa11.91□□□□□ -0.5
CDC42BPB-208ENST00000561271 ST6GAL2Q96JF0 529 aa11.91□□□□□ -0.5
CDC42BPB-208ENST00000561271 NAGKQ9UJ70 344 aa11.91□□□□□ -0.5
CDC42BPB-208ENST00000561271 LENEPQ9Y5L5 61 aa11.91□□□□□ -0.5
CDC42BPB-208ENST00000561271 A0A096LPF7 62 aa11.9□□□□□ -0.5
CDC42BPB-208ENST00000561271 TRAV8-1A0A0A6YYK1 113 aa11.9□□□□□ -0.5
CDC42BPB-208ENST00000561271 GIPP09681 153 aaPredicted RBP11.9□□□□□ -0.5
CDC42BPB-208ENST00000561271 ATP6V0CP27449 155 aa11.9□□□□□ -0.5
CDC42BPB-208ENST00000561271 TMEM183BQ1AE95 376 aa11.9□□□□□ -0.5
CDC42BPB-208ENST00000561271 FAM74A1Q5RGS3 127 aa11.9□□□□□ -0.5
CDC42BPB-208ENST00000561271 TMEM183AQ8IXX5 376 aa11.9□□□□□ -0.5
CDC42BPB-208ENST00000561271 C6orf223Q8N319 242 aa11.9□□□□□ -0.5
CDC42BPB-208ENST00000561271 KRTAP1-5Q9BYS1 174 aa11.9□□□□□ -0.5
CDC42BPB-208ENST00000561271 SH3BGRL3Q9H299 93 aa11.9□□□□□ -0.5
CDC42BPB-208ENST00000561271 MDFICQ9P1T7 246 aa11.9□□□□□ -0.5
CDC42BPB-208ENST00000561271 F6UZH7 168 aa11.89□□□□□ -0.51
CDC42BPB-208ENST00000561271 TNP2Q05952 138 aa11.89□□□□□ -0.51
CDC42BPB-208ENST00000561271 TMED6Q8WW62 240 aa11.89□□□□□ -0.51
CDC42BPB-208ENST00000561271 PSMG3Q9BT73 122 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPB-208ENST00000561271 Q9H8V8 135 aa11.89□□□□□ -0.51
CDC42BPB-208ENST00000561271 MRPS16Q9Y3D3 137 aaKnown RBP11.89□□□□□ -0.51
CDC42BPB-208ENST00000561271 STAG3L2P0CL84 134 aa11.88□□□□□ -0.51
CDC42BPB-208ENST00000561271 STAG3L3P0CL85 134 aa11.88□□□□□ -0.51
CDC42BPB-208ENST00000561271 FAM159AQ6UWV7 190 aa11.88□□□□□ -0.51
CDC42BPB-208ENST00000561271 ZNF575Q86XF7 245 aa11.88□□□□□ -0.51
CDC42BPB-208ENST00000561271 RAB24Q969Q5 203 aa11.88□□□□□ -0.51
CDC42BPB-208ENST00000561271 UPK3BQ9BT76 320 aa11.88□□□□□ -0.51
CDC42BPB-208ENST00000561271 FXYD6-FXYD2A0A087WZ82 144 aa11.87□□□□□ -0.51
CDC42BPB-208ENST00000561271 RNF222A6NCQ9 220 aa11.87□□□□□ -0.51
CDC42BPB-208ENST00000561271 TVP23CQ96ET8 276 aa11.87□□□□□ -0.51
CDC42BPB-208ENST00000561271 SGK494Q96LW2 274 aa11.87□□□□□ -0.51
CDC42BPB-208ENST00000561271 TRGV11A0A075B6L2 103 aa11.86□□□□□ -0.51
CDC42BPB-208ENST00000561271 PAX4O43316 350 aa11.86□□□□□ -0.51
CDC42BPB-208ENST00000561271 GCHFRP30047 84 aa11.86□□□□□ -0.51
CDC42BPB-208ENST00000561271 TTC32Q5I0X7 151 aa11.86□□□□□ -0.51
CDC42BPB-208ENST00000561271 C8orf49Q96NF6 230 aa11.86□□□□□ -0.51
CDC42BPB-208ENST00000561271 ICOSQ9Y6W8 199 aa11.86□□□□□ -0.51
CDC42BPB-208ENST00000561271 SFTA3P0C7M3 94 aa11.85□□□□□ -0.51
CDC42BPB-208ENST00000561271 FHL2Q14192 279 aa11.85□□□□□ -0.51
CDC42BPB-208ENST00000561271 RPL7L1Q6DKI1 246 aaKnown RBP11.85□□□□□ -0.51
CDC42BPB-208ENST00000561271 ARL6IP6Q8N6S5 226 aa11.85□□□□□ -0.51
CDC42BPB-208ENST00000561271 C5orf17Q8NAS9 161 aa11.85□□□□□ -0.51
CDC42BPB-208ENST00000561271 INO80EQ8NBZ0 244 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPB-208ENST00000561271 ASB13Q8WXK3 278 aa11.85□□□□□ -0.51
CDC42BPB-208ENST00000561271 TREM1Q9NP99 234 aa11.85□□□□□ -0.51
CDC42BPB-208ENST00000561271 PRO0255Q9UI72 69 aa11.85□□□□□ -0.51
CDC42BPB-208ENST00000561271 MBP02144 154 aa11.84□□□□□ -0.51
CDC42BPB-208ENST00000561271 CRYBA4P53673 196 aa11.84□□□□□ -0.51
CDC42BPB-208ENST00000561271 SERF2P84101 59 aa11.84□□□□□ -0.51
CDC42BPB-208ENST00000561271 TDRG1Q3Y452 100 aa11.84□□□□□ -0.51
CDC42BPB-208ENST00000561271 OR2T35Q8NGX2 323 aa11.84□□□□□ -0.51
CDC42BPB-208ENST00000561271 TNFSF18Q9UNG2 199 aa11.84□□□□□ -0.51
CDC42BPB-208ENST00000561271 PCLOQ9Y6V0 5065 aa11.83□□□□□ -0.52
CDC42BPB-208ENST00000561271 TRAV21A0A0B4J279 112 aa11.83□□□□□ -0.52
CDC42BPB-208ENST00000561271 TRGV4A0A0C4DH28 118 aa11.83□□□□□ -0.52
CDC42BPB-208ENST00000561271 GGTLC3B5MD39 225 aa11.83□□□□□ -0.52
CDC42BPB-208ENST00000561271 GNRH2O43555 120 aa11.83□□□□□ -0.52
CDC42BPB-208ENST00000561271 TCRAP04437 139 aa11.83□□□□□ -0.52
CDC42BPB-208ENST00000561271 TYMSP04818 313 aa11.83□□□□□ -0.52
CDC42BPB-208ENST00000561271 MED14OSP0DP75 135 aa11.83□□□□□ -0.52
CDC42BPB-208ENST00000561271 IQCF2Q8IXL9 164 aa11.83□□□□□ -0.52
CDC42BPB-208ENST00000561271 SUN5Q8TC36 379 aa11.83□□□□□ -0.52
CDC42BPB-208ENST00000561271 ZNF479Q96JC4 524 aa11.83□□□□□ -0.52
CDC42BPB-208ENST00000561271 SPXQ9BT56 116 aa11.83□□□□□ -0.52
CDC42BPB-208ENST00000561271 HHLA3Q9XRX5 114 aa11.83□□□□□ -0.52
CDC42BPB-208ENST00000561271 IGHV3-16A0A0C4DH30 117 aa11.82□□□□□ -0.52
CDC42BPB-208ENST00000561271 G3V3Q6 166 aa11.82□□□□□ -0.52
CDC42BPB-208ENST00000561271 CXorf1O96002 111 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms