RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 ZNF705AQ6ZN79 300 aaPredicted RBP7.79□□□□□ -1.16
TPM1-229ENST00000561242 Q8TAT8 98 aa7.79□□□□□ -1.16
TPM1-229ENST00000561242 SGK494Q96LW2 274 aa7.79□□□□□ -1.16
TPM1-229ENST00000561242 YTHDF2Q9Y5A9 579 aaKnown RBP7.79□□□□□ -1.16
TPM1-229ENST00000561242 IGHV1OR15-1A0A075B7D0 117 aa7.78□□□□□ -1.16
TPM1-229ENST00000561242 NUPR2A6NF83 97 aa7.78□□□□□ -1.16
TPM1-229ENST00000561242 LYRM9A8MSI8 78 aa7.78□□□□□ -1.16
TPM1-229ENST00000561242 A8MTW9 85 aa7.78□□□□□ -1.16
TPM1-229ENST00000561242 FABP5P3A8MUU1 101 aa7.78□□□□□ -1.16
TPM1-229ENST00000561242 GGTLC3B5MD39 225 aa7.78□□□□□ -1.16
TPM1-229ENST00000561242 CRISP2P16562 243 aa7.78□□□□□ -1.16
TPM1-229ENST00000561242 ZNF415Q09FC8 603 aa7.78□□□□□ -1.16
TPM1-229ENST00000561242 BAGE2Q86Y30 109 aa7.78□□□□□ -1.16
TPM1-229ENST00000561242 CSNK1G2-AS1Q8NCQ2 148 aa7.78□□□□□ -1.16
TPM1-229ENST00000561242 TMEM263Q8WUH6 116 aaKnown RBP7.78□□□□□ -1.16
TPM1-229ENST00000561242 TRGV2A0A075B6R0 118 aa7.77□□□□□ -1.17
TPM1-229ENST00000561242 TRAV8-1A0A0A6YYK1 113 aa7.77□□□□□ -1.17
TPM1-229ENST00000561242 TRAV34A0A0B4J273 112 aa7.77□□□□□ -1.17
TPM1-229ENST00000561242 GCGP01275 180 aa7.77□□□□□ -1.17
TPM1-229ENST00000561242 ORM1P02763 201 aa7.77□□□□□ -1.17
TPM1-229ENST00000561242 DEFB130BP0DP73 79 aa7.77□□□□□ -1.17
TPM1-229ENST00000561242 DEFB130AP0DP74 79 aa7.77□□□□□ -1.17
TPM1-229ENST00000561242 BCL2P10415 239 aa7.77□□□□□ -1.17
TPM1-229ENST00000561242 MGST1P10620 155 aaKnown RBP7.77□□□□□ -1.17
TPM1-229ENST00000561242 HTN3P15516 51 aa7.77□□□□□ -1.17
TPM1-229ENST00000561242 MEF2BQ02080 365 aaPredicted RBP7.77□□□□□ -1.17
TPM1-229ENST00000561242 BTN1A1Q13410 526 aa7.77□□□□□ -1.17
TPM1-229ENST00000561242 OR5I1Q13606 314 aa7.77□□□□□ -1.17
TPM1-229ENST00000561242 PEA15Q15121 130 aa7.77□□□□□ -1.17
TPM1-229ENST00000561242 ZFAND6Q6FIF0 208 aa7.77□□□□□ -1.17
TPM1-229ENST00000561242 C1orf158Q8N1D5 194 aa7.77□□□□□ -1.17
TPM1-229ENST00000561242 TRAV10A0A0B4J240 114 aa7.76□□□□□ -1.17
TPM1-229ENST00000561242 XKRY2A2RUG3 117 aa7.76□□□□□ -1.17
TPM1-229ENST00000561242 RBFOX3A6NFN3 312 aa7.76□□□□□ -1.17
TPM1-229ENST00000561242 KLLNB2CW77 178 aa7.76□□□□□ -1.17
TPM1-229ENST00000561242 GIG44P09565 113 aaPredicted RBP7.76□□□□□ -1.17
TPM1-229ENST00000561242 ATP5G3P48201 142 aa7.76□□□□□ -1.17
TPM1-229ENST00000561242 GNG4P50150 75 aa7.76□□□□□ -1.17
TPM1-229ENST00000561242 TMEM183BQ1AE95 376 aa7.76□□□□□ -1.17
TPM1-229ENST00000561242 MUC21Q5SSG8 566 aa7.76□□□□□ -1.17
TPM1-229ENST00000561242 FAM222AQ5U5X8 452 aa7.76□□□□□ -1.17
TPM1-229ENST00000561242 TEX261Q6UWH6 196 aa7.76□□□□□ -1.17
TPM1-229ENST00000561242 X6R8D5 127 aa7.76□□□□□ -1.17
TPM1-229ENST00000561242 CRXO43186 299 aaPredicted RBP7.75□□□□□ -1.17
TPM1-229ENST00000561242 PFN1P07737 140 aaKnown RBP7.75□□□□□ -1.17
TPM1-229ENST00000561242 NANOS2P60321 138 aaKnown RBP7.75□□□□□ -1.17
TPM1-229ENST00000561242 ZNF674Q2M3X9 581 aa7.75□□□□□ -1.17
TPM1-229ENST00000561242 FAM162BQ5T6X4 162 aa7.75□□□□□ -1.17
TPM1-229ENST00000561242 Q8NAQ8 132 aa7.75□□□□□ -1.17
TPM1-229ENST00000561242 C2CD4CQ8TF44 421 aa7.75□□□□□ -1.17
TPM1-229ENST00000561242 PHLDA1Q8WV24 401 aaPredicted RBP7.75□□□□□ -1.17
TPM1-229ENST00000561242 SPXQ9BT56 116 aa7.75□□□□□ -1.17
TPM1-229ENST00000561242 NOP10Q9NPE3 64 aaKnown RBP7.75□□□□□ -1.17
TPM1-229ENST00000561242 TRGV1A0A0A0MS02 117 aa7.74□□□□□ -1.17
TPM1-229ENST00000561242 SCO2A0A1W2PP80 73 aa7.74□□□□□ -1.17
TPM1-229ENST00000561242 ASIPP42127 132 aa7.74□□□□□ -1.17
TPM1-229ENST00000561242 ANXA2RQ3ZCQ2 193 aa7.74□□□□□ -1.17
TPM1-229ENST00000561242 PRR27Q6MZM9 219 aa7.74□□□□□ -1.17
TPM1-229ENST00000561242 TMEM183AQ8IXX5 376 aa7.74□□□□□ -1.17
TPM1-229ENST00000561242 ZFAND2AQ8N6M9 145 aa7.74□□□□□ -1.17
TPM1-229ENST00000561242 SYT8Q8NBV8 401 aa7.74□□□□□ -1.17
TPM1-229ENST00000561242 LINC00479Q96M42 142 aa7.74□□□□□ -1.17
TPM1-229ENST00000561242 EDA2RQ9HAV5 297 aa7.74□□□□□ -1.17
TPM1-229ENST00000561242 DEFB131BA0A096LNP1 70 aa7.73□□□□□ -1.17
TPM1-229ENST00000561242 B4DEV8 164 aa7.73□□□□□ -1.17
TPM1-229ENST00000561242 F5H768 121 aa7.73□□□□□ -1.17
TPM1-229ENST00000561242 ATP5G1P05496 136 aa7.73□□□□□ -1.17
TPM1-229ENST00000561242 RBMY1A1P0DJD3 496 aaKnown RBP7.73□□□□□ -1.17
TPM1-229ENST00000561242 RBMY1CP0DJD4 496 aa7.73□□□□□ -1.17
TPM1-229ENST00000561242 CCL20P78556 96 aa7.73□□□□□ -1.17
TPM1-229ENST00000561242 RBMY1FQ15415 496 aaKnown RBP7.73□□□□□ -1.17
TPM1-229ENST00000561242 IBA57Q5T440 356 aaKnown RBP7.73□□□□□ -1.17
TPM1-229ENST00000561242 Q6AWC8 147 aa7.73□□□□□ -1.17
TPM1-229ENST00000561242 CEMP1Q6PRD7 247 aaPredicted RBP7.73□□□□□ -1.17
TPM1-229ENST00000561242 ZNF767PQ75MW2 155 aa7.73□□□□□ -1.17
TPM1-229ENST00000561242 Q86TA4 180 aa7.73□□□□□ -1.17
TPM1-229ENST00000561242 FAM19A4Q96LR4 140 aa7.73□□□□□ -1.17
TPM1-229ENST00000561242 LINC00467Q9BRT7 94 aa7.73□□□□□ -1.17
TPM1-229ENST00000561242 GSN-AS1Q9NRJ2 163 aa7.73□□□□□ -1.17
TPM1-229ENST00000561242 PLA2G2EQ9NZK7 142 aa7.73□□□□□ -1.17
TPM1-229ENST00000561242 NBEAL1Q6ZS30 2694 aa7.72□□□□□ -1.17
TPM1-229ENST00000561242 TRBV6-1A0A0K0K1D8 114 aa7.72□□□□□ -1.17
TPM1-229ENST00000561242 GAGE12BA1L429 117 aa7.72□□□□□ -1.17
TPM1-229ENST00000561242 IGLL5B9A064 214 aa7.72□□□□□ -1.17
TPM1-229ENST00000561242 GAGE7O76087 117 aa7.72□□□□□ -1.17
TPM1-229ENST00000561242 GAGE12FP0CL80 117 aa7.72□□□□□ -1.17
TPM1-229ENST00000561242 GAGE12GP0CL81 117 aa7.72□□□□□ -1.17
TPM1-229ENST00000561242 GAGE12IP0CL82 117 aa7.72□□□□□ -1.17
TPM1-229ENST00000561242 RPL35P42766 123 aaKnown RBP7.72□□□□□ -1.17
TPM1-229ENST00000561242 TCTAP57738 103 aa7.72□□□□□ -1.17
TPM1-229ENST00000561242 RPS20P60866 119 aaKnown RBP7.72□□□□□ -1.17
TPM1-229ENST00000561242 SLAQ13239 276 aa7.72□□□□□ -1.17
TPM1-229ENST00000561242 TOR2AQ5JU69 321 aa7.72□□□□□ -1.17
TPM1-229ENST00000561242 C8orf49Q96NF6 230 aa7.72□□□□□ -1.17
TPM1-229ENST00000561242 DKK2Q9UBU2 259 aa7.72□□□□□ -1.17
TPM1-229ENST00000561242 TMEM250H0YL14 139 aa7.71□□□□□ -1.18
TPM1-229ENST00000561242 ZNF324O75467 553 aaPredicted RBP7.71□□□□□ -1.18
TPM1-229ENST00000561242 AZU1P20160 251 aa7.71□□□□□ -1.18
TPM1-229ENST00000561242 KIR3DS1Q14943 382 aa7.71□□□□□ -1.18
TPM1-229ENST00000561242 SMIM12Q96EX1 92 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms