RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 RPL11P62913 178 aaKnown RBP9.9□□□□□ -0.82
SMAD3-214ENST00000560402 TMEM183BQ1AE95 376 aa9.9□□□□□ -0.82
SMAD3-214ENST00000560402 MORN3Q6PF18 240 aaPredicted RBP9.9□□□□□ -0.82
SMAD3-214ENST00000560402 OCC1Q8TAD7 63 aa9.9□□□□□ -0.82
SMAD3-214ENST00000560402 HECTD4Q9Y4D8 3996 aa9.9□□□□□ -0.83
SMAD3-214ENST00000560402 DNAH10Q8IVF4 4471 aa9.89□□□□□ -0.83
SMAD3-214ENST00000560402 TRBV19A0A075B6N1 114 aa9.89□□□□□ -0.83
SMAD3-214ENST00000560402 FBLL1A6NHQ2 334 aaKnown RBP9.89□□□□□ -0.83
SMAD3-214ENST00000560402 ZNF253O75346 499 aa9.89□□□□□ -0.83
SMAD3-214ENST00000560402 APOHP02749 345 aaPredicted RBP9.89□□□□□ -0.83
SMAD3-214ENST00000560402 MGST1P10620 155 aaKnown RBP9.89□□□□□ -0.83
SMAD3-214ENST00000560402 ERVFC1-1P60608 527 aa9.89□□□□□ -0.83
SMAD3-214ENST00000560402 C1orf194Q5T5A4 169 aa9.89□□□□□ -0.83
SMAD3-214ENST00000560402 BAGE2Q86Y30 109 aa9.89□□□□□ -0.83
SMAD3-214ENST00000560402 ARL6IP6Q8N6S5 226 aa9.89□□□□□ -0.83
SMAD3-214ENST00000560402 RPH3ALQ9UNE2 315 aa9.89□□□□□ -0.83
SMAD3-214ENST00000560402 TRBV20OR9-2A0A075B6H5 130 aa9.88□□□□□ -0.83
SMAD3-214ENST00000560402 K7EQG2 157 aa9.88□□□□□ -0.83
SMAD3-214ENST00000560402 ISLRO14498 428 aa9.88□□□□□ -0.83
SMAD3-214ENST00000560402 TCRAP04437 139 aa9.88□□□□□ -0.83
SMAD3-214ENST00000560402 IGLC2P0DOY2 106 aa9.88□□□□□ -0.83
SMAD3-214ENST00000560402 TRPT1Q86TN4 253 aaKnown RBP9.88□□□□□ -0.83
SMAD3-214ENST00000560402 Q8NAQ8 132 aa9.88□□□□□ -0.83
SMAD3-214ENST00000560402 YPEL4Q96NS1 127 aa9.88□□□□□ -0.83
SMAD3-214ENST00000560402 OSTCQ9NRP0 149 aa9.88□□□□□ -0.83
SMAD3-214ENST00000560402 ZNF586Q9NXT0 402 aa9.88□□□□□ -0.83
SMAD3-214ENST00000560402 IGHV3-66A0A0C4DH42 116 aa9.87□□□□□ -0.83
SMAD3-214ENST00000560402 GCGP01275 180 aa9.87□□□□□ -0.83
SMAD3-214ENST00000560402 MIFP14174 115 aa9.87□□□□□ -0.83
SMAD3-214ENST00000560402 IGF2BP2-AS1Q96M15 143 aa9.87□□□□□ -0.83
SMAD3-214ENST00000560402 KLF12Q9Y4X4 402 aa9.87□□□□□ -0.83
SMAD3-214ENST00000560402 AGRNO00468 2067 aa9.86□□□□□ -0.83
SMAD3-214ENST00000560402 VPS13DQ5THJ4 4388 aa9.86□□□□□ -0.83
SMAD3-214ENST00000560402 TGIF2-C20orf24A0A0A6YYL0 155 aa9.86□□□□□ -0.83
SMAD3-214ENST00000560402 TRBV6-1A0A0K0K1D8 114 aa9.86□□□□□ -0.83
SMAD3-214ENST00000560402 A0A1W2PPQ1 181 aa9.86□□□□□ -0.83
SMAD3-214ENST00000560402 PGPEP1LA6NFU8 196 aa9.86□□□□□ -0.83
SMAD3-214ENST00000560402 PFN1P07737 140 aaKnown RBP9.86□□□□□ -0.83
SMAD3-214ENST00000560402 FAM3BP58499 235 aaPredicted RBP9.86□□□□□ -0.83
SMAD3-214ENST00000560402 IBA57Q5T440 356 aaKnown RBP9.86□□□□□ -0.83
SMAD3-214ENST00000560402 SLC50A1Q9BRV3 221 aa9.86□□□□□ -0.83
SMAD3-214ENST00000560402 CLEC5AQ9NY25 188 aa9.86□□□□□ -0.83
SMAD3-214ENST00000560402 IL36BQ9NZH7 164 aa9.86□□□□□ -0.83
SMAD3-214ENST00000560402 A0A087X0K7 114 aa9.85□□□□□ -0.83
SMAD3-214ENST00000560402 ZNF688P0C7X2 276 aa9.85□□□□□ -0.83
SMAD3-214ENST00000560402 GNG5P63218 68 aa9.85□□□□□ -0.83
SMAD3-214ENST00000560402 COX19Q49B96 90 aa9.85□□□□□ -0.83
SMAD3-214ENST00000560402 SIGLEC15Q6ZMC9 328 aa9.85□□□□□ -0.83
SMAD3-214ENST00000560402 FAM231DQ6ZW35 169 aa9.85□□□□□ -0.83
SMAD3-214ENST00000560402 TMEM75Q8N9X5 138 aa9.85□□□□□ -0.83
SMAD3-214ENST00000560402 DCANP1Q8TF63 244 aa9.85□□□□□ -0.83
SMAD3-214ENST00000560402 DAZAP1Q96EP5 407 aaKnown RBP9.85□□□□□ -0.83
SMAD3-214ENST00000560402 PYGO2Q9BRQ0 406 aa9.85□□□□□ -0.83
SMAD3-214ENST00000560402 HERC2O95714 4834 aa9.85□□□□□ -0.83
SMAD3-214ENST00000560402 IGHV4-28A0A0C4DH34 117 aa9.84□□□□□ -0.83
SMAD3-214ENST00000560402 LOC105371267A0A1B0GV96 52 aa9.84□□□□□ -0.83
SMAD3-214ENST00000560402 H3BTX0 84 aa9.84□□□□□ -0.83
SMAD3-214ENST00000560402 K7EN84 100 aa9.84□□□□□ -0.83
SMAD3-214ENST00000560402 MRPS12O15235 138 aaKnown RBP9.84□□□□□ -0.83
SMAD3-214ENST00000560402 DEFB4AO15263 64 aa9.84□□□□□ -0.83
SMAD3-214ENST00000560402 GATCO43716 136 aaKnown RBP9.84□□□□□ -0.83
SMAD3-214ENST00000560402 CXCL1P09341 107 aa9.84□□□□□ -0.83
SMAD3-214ENST00000560402 GLMPQ8WWB7 406 aa9.84□□□□□ -0.83
SMAD3-214ENST00000560402 ZFP30Q9Y2G7 519 aa9.84□□□□□ -0.83
SMAD3-214ENST00000560402 U3KQE9 123 aa9.84□□□□□ -0.83
SMAD3-214ENST00000560402 TRAV10A0A0B4J240 114 aa9.83□□□□□ -0.84
SMAD3-214ENST00000560402 ZNF705GA8MUZ8 300 aaPredicted RBP9.83□□□□□ -0.84
SMAD3-214ENST00000560402 BUB3O43684 328 aa9.83□□□□□ -0.84
SMAD3-214ENST00000560402 TYMSP04818 313 aa9.83□□□□□ -0.84
SMAD3-214ENST00000560402 SNRPCP09234 159 aaKnown RBP9.83□□□□□ -0.84
SMAD3-214ENST00000560402 GIG44P09565 113 aaPredicted RBP9.83□□□□□ -0.84
SMAD3-214ENST00000560402 SAMD13Q5VXD3 122 aa9.83□□□□□ -0.84
SMAD3-214ENST00000560402 GOLT1AQ6ZVE7 132 aa9.83□□□□□ -0.84
SMAD3-214ENST00000560402 Q86TA4 180 aa9.83□□□□□ -0.84
SMAD3-214ENST00000560402 EXOC3-AS1Q8N2X6 119 aa9.83□□□□□ -0.84
SMAD3-214ENST00000560402 C1QTNF4Q9BXJ3 329 aa9.83□□□□□ -0.84
SMAD3-214ENST00000560402 ZNF492Q9P255 531 aa9.83□□□□□ -0.84
SMAD3-214ENST00000560402 TRAV34A0A0B4J273 112 aa9.82□□□□□ -0.84
SMAD3-214ENST00000560402 KNCNA6PVL3 124 aa9.82□□□□□ -0.84
SMAD3-214ENST00000560402 IGLL5B9A064 214 aa9.82□□□□□ -0.84
SMAD3-214ENST00000560402 LTAP01374 205 aa9.82□□□□□ -0.84
SMAD3-214ENST00000560402 CT45A10P0DMU9 189 aa9.82□□□□□ -0.84
SMAD3-214ENST00000560402 NUTF2P61970 127 aaKnown RBP9.82□□□□□ -0.84
SMAD3-214ENST00000560402 SNRPD3P62318 126 aaKnown RBP9.82□□□□□ -0.84
SMAD3-214ENST00000560402 OR5I1Q13606 314 aa9.82□□□□□ -0.84
SMAD3-214ENST00000560402 ACTL10Q5JWF8 245 aa9.82□□□□□ -0.84
SMAD3-214ENST00000560402 C16orf54Q6UWD8 224 aa9.82□□□□□ -0.84
SMAD3-214ENST00000560402 TMEM183AQ8IXX5 376 aa9.82□□□□□ -0.84
SMAD3-214ENST00000560402 ZFP82Q8N141 532 aa9.82□□□□□ -0.84
SMAD3-214ENST00000560402 NDFIP1Q9BT67 221 aa9.82□□□□□ -0.84
SMAD3-214ENST00000560402 APLNQ9ULZ1 77 aa9.82□□□□□ -0.84
SMAD3-214ENST00000560402 X6R8D5 127 aa9.82□□□□□ -0.84
SMAD3-214ENST00000560402 DIRC3C9JPN6 131 aa9.81□□□□□ -0.84
SMAD3-214ENST00000560402 IGLV2-8P01709 118 aa9.81□□□□□ -0.84
SMAD3-214ENST00000560402 RBMY1A1P0DJD3 496 aaKnown RBP9.81□□□□□ -0.84
SMAD3-214ENST00000560402 RBMY1CP0DJD4 496 aa9.81□□□□□ -0.84
SMAD3-214ENST00000560402 HLA-DMBP28068 263 aa9.81□□□□□ -0.84
SMAD3-214ENST00000560402 RBMY1FQ15415 496 aaKnown RBP9.81□□□□□ -0.84
SMAD3-214ENST00000560402 PSG3Q16557 428 aa9.81□□□□□ -0.84
SMAD3-214ENST00000560402 PSMG4Q5JS54 123 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms