RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 IGHV1-69DA0A0B4J2H0 117 aa7.69□□□□□ -1.18
LRRC28-216ENST00000559819 RBAKDNA6NC62 111 aa7.69□□□□□ -1.18
LRRC28-216ENST00000559819 SMAD7O15105 426 aaKnown RBP7.69□□□□□ -1.18
LRRC28-216ENST00000559819 IGHV1-69P01742 117 aa7.69□□□□□ -1.18
LRRC28-216ENST00000559819 IGF1P05019 195 aa7.69□□□□□ -1.18
LRRC28-216ENST00000559819 UNQ9165/PRO28630Q6UXU0 137 aa7.69□□□□□ -1.18
LRRC28-216ENST00000559819 C2orf91Q6ZV80 131 aa7.69□□□□□ -1.18
LRRC28-216ENST00000559819 C20orf173Q96LM9 149 aa7.69□□□□□ -1.18
LRRC28-216ENST00000559819 IGHV3-11P01762 117 aa7.68□□□□□ -1.18
LRRC28-216ENST00000559819 COX8AP10176 69 aa7.68□□□□□ -1.18
LRRC28-216ENST00000559819 C19orf54Q5BKX5 351 aa7.68□□□□□ -1.18
LRRC28-216ENST00000559819 TMEM78Q5T7P6 136 aa7.68□□□□□ -1.18
LRRC28-216ENST00000559819 PRR9Q5T870 116 aa7.68□□□□□ -1.18
LRRC28-216ENST00000559819 LCNL1Q6ZST4 164 aa7.68□□□□□ -1.18
LRRC28-216ENST00000559819 ZNF738Q8NE65 137 aa7.68□□□□□ -1.18
LRRC28-216ENST00000559819 C16orf92Q96LL3 132 aa7.68□□□□□ -1.18
LRRC28-216ENST00000559819 CNFNQ9BYD5 112 aa7.68□□□□□ -1.18
LRRC28-216ENST00000559819 U3KQE9 123 aa7.68□□□□□ -1.18
LRRC28-216ENST00000559819 SPRY2O43597 315 aa7.68□□□□□ -1.18
LRRC28-216ENST00000559819 ARL3P36405 182 aa7.68□□□□□ -1.18
LRRC28-216ENST00000559819 SPTAN1Q13813 2472 aaKnown RBP7.68□□□□□ -1.18
LRRC28-216ENST00000559819 CELSR1Q9NYQ6 3014 aa7.67□□□□□ -1.18
LRRC28-216ENST00000559819 TRAV26-2A0A0B4J265 109 aa7.67□□□□□ -1.18
LRRC28-216ENST00000559819 TAX1BP3O14907 124 aa7.67□□□□□ -1.18
LRRC28-216ENST00000559819 TNFRSF6BO95407 300 aa7.67□□□□□ -1.18
LRRC28-216ENST00000559819 PTTG1IPP53801 180 aa7.67□□□□□ -1.18
LRRC28-216ENST00000559819 IFI27L1Q96BM0 104 aa7.67□□□□□ -1.18
LRRC28-216ENST00000559819 MAP1LC3AQ9H492 121 aa7.67□□□□□ -1.18
LRRC28-216ENST00000559819 DKK2Q9UBU2 259 aa7.67□□□□□ -1.18
LRRC28-216ENST00000559819 CBY3A6NI87 242 aa7.67□□□□□ -1.18
LRRC28-216ENST00000559819 LGALS9BQ3B8N2 356 aa7.67□□□□□ -1.18
LRRC28-216ENST00000559819 LGALS9CQ6DKI2 356 aa7.67□□□□□ -1.18
LRRC28-216ENST00000559819 Q6ZS46 218 aa7.67□□□□□ -1.18
LRRC28-216ENST00000559819 IGHV7-4-1A0A0J9YVY3 117 aa7.66□□□□□ -1.18
LRRC28-216ENST00000559819 FGF6P10767 208 aa7.66□□□□□ -1.18
LRRC28-216ENST00000559819 LEPP41159 167 aa7.66□□□□□ -1.18
LRRC28-216ENST00000559819 HIST1H1AQ02539 215 aaPredicted RBP7.66□□□□□ -1.18
LRRC28-216ENST00000559819 GLMPQ8WWB7 406 aa7.66□□□□□ -1.18
LRRC28-216ENST00000559819 CCL19Q99731 98 aa7.66□□□□□ -1.18
LRRC28-216ENST00000559819 PIMREGQ9BSJ6 248 aa7.66□□□□□ -1.18
LRRC28-216ENST00000559819 UFC1Q9Y3C8 167 aa7.66□□□□□ -1.18
LRRC28-216ENST00000559819 IGKV3-7A0A075B6H7 116 aa7.66□□□□□ -1.18
LRRC28-216ENST00000559819 GPHB5Q86YW7 130 aa7.66□□□□□ -1.18
LRRC28-216ENST00000559819 KLK15Q9H2R5 256 aa7.66□□□□□ -1.18
LRRC28-216ENST00000559819 IGHV4-30-2A0A087WSY4 118 aa7.65□□□□□ -1.18
LRRC28-216ENST00000559819 FAM223BA6NKX1 122 aa7.65□□□□□ -1.18
LRRC28-216ENST00000559819 H3BUX3 64 aa7.65□□□□□ -1.18
LRRC28-216ENST00000559819 BLCAPP62952 87 aa7.65□□□□□ -1.18
LRRC28-216ENST00000559819 UBE2V1Q13404 147 aa7.65□□□□□ -1.18
LRRC28-216ENST00000559819 C9orf47Q6ZRZ4 202 aa7.65□□□□□ -1.18
LRRC28-216ENST00000559819 FAM223AQ8IWN6 122 aa7.65□□□□□ -1.18
LRRC28-216ENST00000559819 C10orf105Q8TEF2 133 aa7.65□□□□□ -1.18
LRRC28-216ENST00000559819 H3BVH4 76 aa7.65□□□□□ -1.19
LRRC28-216ENST00000559819 VAMP3Q15836 100 aa7.65□□□□□ -1.19
LRRC28-216ENST00000559819 C12orf54Q6X4T0 127 aa7.65□□□□□ -1.19
LRRC28-216ENST00000559819 DEFB125Q8N687 156 aa7.65□□□□□ -1.19
LRRC28-216ENST00000559819 MRPL53Q96EL3 112 aaKnown RBP7.65□□□□□ -1.19
LRRC28-216ENST00000559819 PPBPP02775 128 aa7.64□□□□□ -1.19
LRRC28-216ENST00000559819 EDN2P20800 178 aa7.64□□□□□ -1.19
LRRC28-216ENST00000559819 CRIP2P52943 208 aaPredicted RBP7.64□□□□□ -1.19
LRRC28-216ENST00000559819 OR2K2Q8NGT1 345 aa7.64□□□□□ -1.19
LRRC28-216ENST00000559819 TMEM158Q8WZ71 300 aa7.64□□□□□ -1.19
LRRC28-216ENST00000559819 MEGF9Q9H1U4 602 aa7.64□□□□□ -1.19
LRRC28-216ENST00000559819 F6UB75 175 aa7.64□□□□□ -1.19
LRRC28-216ENST00000559819 PF4V1P10720 104 aa7.64□□□□□ -1.19
LRRC28-216ENST00000559819 FCER1GP30273 86 aa7.64□□□□□ -1.19
LRRC28-216ENST00000559819 PCP4P48539 62 aa7.64□□□□□ -1.19
LRRC28-216ENST00000559819 NMUP48645 174 aa7.64□□□□□ -1.19
LRRC28-216ENST00000559819 PCP2Q8IVA1 136 aa7.64□□□□□ -1.19
LRRC28-216ENST00000559819 ATP5J2P56134 94 aa7.63□□□□□ -1.19
LRRC28-216ENST00000559819 RPL11P62913 178 aaKnown RBP7.63□□□□□ -1.19
LRRC28-216ENST00000559819 KIR3DS1Q14943 382 aa7.63□□□□□ -1.19
LRRC28-216ENST00000559819 SPANXN1Q5VSR9 72 aa7.63□□□□□ -1.19
LRRC28-216ENST00000559819 C9orf139Q6ZV77 190 aa7.63□□□□□ -1.19
LRRC28-216ENST00000559819 IGLV2-18A0A075B6J9 118 aa7.63□□□□□ -1.19
LRRC28-216ENST00000559819 A6NDX4 124 aa7.63□□□□□ -1.19
LRRC28-216ENST00000559819 LINC01546A6NGU7 62 aa7.63□□□□□ -1.19
LRRC28-216ENST00000559819 SRD5A1P18405 259 aa7.63□□□□□ -1.19
LRRC28-216ENST00000559819 NRACQ8N912 160 aa7.63□□□□□ -1.19
LRRC28-216ENST00000559819 NRGNQ92686 78 aa7.63□□□□□ -1.19
LRRC28-216ENST00000559819 HIF1ANQ9NWT6 349 aa7.63□□□□□ -1.19
LRRC28-216ENST00000559819 PIEZO1Q92508 2521 aa7.63□□□□□ -1.19
LRRC28-216ENST00000559819 PKD1L2Q7Z442 2459 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 NDUFA4O00483 81 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 SOCS3O14543 225 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 AVPP01185 164 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 TMEM97Q5BJF2 176 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 CLEC2AQ6UVW9 174 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 BOD1L2Q8IYS8 172 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 OR4X2Q8NGF9 303 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 TTTY13Q9BZ97 58 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 NXT2Q9NPJ8 142 aaKnown RBP7.62□□□□□ -1.19
LRRC28-216ENST00000559819 COL12A1Q99715 3063 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 IGHG2P01859 326 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 ODF1Q14990 250 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 TM4SF20Q53R12 229 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 ZFAND2AQ8N6M9 145 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 Q8N8P6 123 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 OR1N2Q8NGR9 330 aa7.62□□□□□ -1.19
LRRC28-216ENST00000559819 FOXC2Q99958 501 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms