RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 M0R3E3 92 aa7.54□□□□□ -1.2
HERC1-204ENST00000559715 COX7A2P2O60397 106 aa7.54□□□□□ -1.2
HERC1-204ENST00000559715 NDUFB4O95168 129 aa7.54□□□□□ -1.2
HERC1-204ENST00000559715 CD300CQ08708 224 aa7.54□□□□□ -1.2
HERC1-204ENST00000559715 C10orf113Q5VZT2 155 aa7.54□□□□□ -1.2
HERC1-204ENST00000559715 SCGB1C1Q8TD33 95 aa7.54□□□□□ -1.2
HERC1-204ENST00000559715 DNAJC4Q9NNZ3 241 aa7.54□□□□□ -1.2
HERC1-204ENST00000559715 KLF12Q9Y4X4 402 aa7.54□□□□□ -1.2
HERC1-204ENST00000559715 TIMM9Q9Y5J7 89 aa7.54□□□□□ -1.2
HERC1-204ENST00000559715 LRP1Q07954 4544 aaKnown RBP7.53□□□□□ -1.2
HERC1-204ENST00000559715 SNURFLB1AK76 121 aa7.53□□□□□ -1.2
HERC1-204ENST00000559715 SMLR1H3BR10 107 aa7.53□□□□□ -1.2
HERC1-204ENST00000559715 TAAR5O14804 337 aa7.53□□□□□ -1.2
HERC1-204ENST00000559715 ARPC5O15511 151 aa7.53□□□□□ -1.2
HERC1-204ENST00000559715 SPINK4O60575 86 aa7.53□□□□□ -1.2
HERC1-204ENST00000559715 ERCC8Q13216 396 aa7.53□□□□□ -1.2
HERC1-204ENST00000559715 PRR9Q5T870 116 aa7.53□□□□□ -1.2
HERC1-204ENST00000559715 CCDC28AQ8IWP9 274 aa7.53□□□□□ -1.2
HERC1-204ENST00000559715 KCNRGQ8N5I3 272 aa7.53□□□□□ -1.2
HERC1-204ENST00000559715 OR11H4Q8NGC9 324 aa7.53□□□□□ -1.2
HERC1-204ENST00000559715 OR2G3Q8NGZ4 309 aa7.53□□□□□ -1.2
HERC1-204ENST00000559715 PSMG3Q9BT73 122 aaPredicted RBP7.53□□□□□ -1.2
HERC1-204ENST00000559715 AGPAT4-IT1Q9H0P7 198 aa7.53□□□□□ -1.2
HERC1-204ENST00000559715 BORCS7-ASMTA0A0B4J1R7 106 aa7.52□□□□□ -1.21
HERC1-204ENST00000559715 SIVA1O15304 175 aa7.52□□□□□ -1.21
HERC1-204ENST00000559715 C1QBP02746 253 aa7.52□□□□□ -1.21
HERC1-204ENST00000559715 DNAH10OSP0CZ25 163 aa7.52□□□□□ -1.21
HERC1-204ENST00000559715 ANXA2RQ3ZCQ2 193 aa7.52□□□□□ -1.21
HERC1-204ENST00000559715 AKAP14Q86UN6 197 aa7.52□□□□□ -1.21
HERC1-204ENST00000559715 MRPL32Q9BYC8 188 aaKnown RBP7.52□□□□□ -1.21
HERC1-204ENST00000559715 TP53TG3Q9ULZ0 132 aa7.52□□□□□ -1.21
HERC1-204ENST00000559715 FUT9Q9Y231 359 aa7.52□□□□□ -1.21
HERC1-204ENST00000559715 hCG_2014768A0A024R1R8 64 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 TRBV19A0A075B6N1 114 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 A0A087WTM6 91 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 A0A0D9SG52 128 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 C7orf71A4D174 169 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 ZNF253O75346 499 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 NXPH4O95158 308 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 SLC25A5P05141 298 aaKnown RBP7.51□□□□□ -1.21
HERC1-204ENST00000559715 INAFM2P0DMQ5 153 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 CRISP2P16562 243 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 LEPP41159 167 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 TCL1AP56279 114 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 BTN1A1Q13410 526 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 FHL2Q14192 279 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 GUK1Q16774 197 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 RPL7L1Q6DKI1 246 aaKnown RBP7.51□□□□□ -1.21
HERC1-204ENST00000559715 LYPD5Q6UWN5 251 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 ZFAND2AQ8N6M9 145 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 MRPL53Q96EL3 112 aaKnown RBP7.51□□□□□ -1.21
HERC1-204ENST00000559715 TMEM14CQ9P0S9 112 aa7.51□□□□□ -1.21
HERC1-204ENST00000559715 A0A1B0GVG6 124 aa7.5□□□□□ -1.21
HERC1-204ENST00000559715 ATP6V0CP27449 155 aa7.5□□□□□ -1.21
HERC1-204ENST00000559715 CRYBA4P53673 196 aa7.5□□□□□ -1.21
HERC1-204ENST00000559715 SERF2P84101 59 aa7.5□□□□□ -1.21
HERC1-204ENST00000559715 GCSAMLQ5JQS6 135 aa7.5□□□□□ -1.21
HERC1-204ENST00000559715 FFAR4Q5NUL3 377 aa7.5□□□□□ -1.21
HERC1-204ENST00000559715 Q5VSD8 79 aa7.5□□□□□ -1.21
HERC1-204ENST00000559715 CDPF1Q6NVV7 123 aa7.5□□□□□ -1.21
HERC1-204ENST00000559715 C9orf47Q6ZRZ4 202 aa7.5□□□□□ -1.21
HERC1-204ENST00000559715 EIF4E3Q8N5X7 224 aaKnown RBP7.5□□□□□ -1.21
HERC1-204ENST00000559715 ARPC5LQ9BPX5 153 aa7.5□□□□□ -1.21
HERC1-204ENST00000559715 CYTL1Q9NRR1 136 aa7.5□□□□□ -1.21
HERC1-204ENST00000559715 TRGV2A0A075B6R0 118 aa7.49□□□□□ -1.21
HERC1-204ENST00000559715 TRGV1A0A0A0MS02 117 aa7.49□□□□□ -1.21
HERC1-204ENST00000559715 BCL2L11O43521 198 aa7.49□□□□□ -1.21
HERC1-204ENST00000559715 ACOT6Q3I5F7 207 aaPredicted RBP7.49□□□□□ -1.21
HERC1-204ENST00000559715 HSD17B11Q8NBQ5 300 aa7.49□□□□□ -1.21
HERC1-204ENST00000559715 ZNF680Q8NEM1 530 aa7.49□□□□□ -1.21
HERC1-204ENST00000559715 FAM167A-AS1Q96KT0 104 aa7.49□□□□□ -1.21
HERC1-204ENST00000559715 HYLS1Q96M11 299 aa7.49□□□□□ -1.21
HERC1-204ENST00000559715 LINC00477Q96M19 166 aa7.49□□□□□ -1.21
HERC1-204ENST00000559715 PAX4O43316 350 aa7.48□□□□□ -1.21
HERC1-204ENST00000559715 MBP02144 154 aa7.48□□□□□ -1.21
HERC1-204ENST00000559715 NMBP08949 121 aa7.48□□□□□ -1.21
HERC1-204ENST00000559715 PYYP10082 97 aa7.48□□□□□ -1.21
HERC1-204ENST00000559715 RNASE4P34096 147 aaKnown RBP7.48□□□□□ -1.21
HERC1-204ENST00000559715 PDE6HQ13956 83 aa7.48□□□□□ -1.21
HERC1-204ENST00000559715 IBA57Q5T440 356 aaKnown RBP7.48□□□□□ -1.21
HERC1-204ENST00000559715 EXOC3-AS1Q8N2X6 119 aa7.48□□□□□ -1.21
HERC1-204ENST00000559715 VGLL1Q99990 258 aa7.48□□□□□ -1.21
HERC1-204ENST00000559715 SLC25A2Q9BXI2 301 aa7.48□□□□□ -1.21
HERC1-204ENST00000559715 PRO0255Q9UI72 69 aa7.48□□□□□ -1.21
HERC1-204ENST00000559715 FAT3Q8TDW7 4589 aa7.48□□□□□ -1.21
HERC1-204ENST00000559715 HMCN2Q8NDA2 5059 aa7.47□□□□□ -1.21
HERC1-204ENST00000559715 KANTRA0A1W2PQU2 76 aa7.47□□□□□ -1.21
HERC1-204ENST00000559715 IGHV3-53P01767 116 aa7.47□□□□□ -1.21
HERC1-204ENST00000559715 SMR3BP02814 79 aaPredicted RBP7.47□□□□□ -1.21
HERC1-204ENST00000559715 HIST1H1EP10412 219 aaKnown RBP7.47□□□□□ -1.21
HERC1-204ENST00000559715 TAS2R45P59539 299 aa7.47□□□□□ -1.21
HERC1-204ENST00000559715 EIF5AP63241 154 aaKnown RBP7.47□□□□□ -1.21
HERC1-204ENST00000559715 KHDC3LQ587J8 217 aa7.47□□□□□ -1.21
HERC1-204ENST00000559715 MIR17HGQ75NE6 70 aa7.47□□□□□ -1.21
HERC1-204ENST00000559715 WFDC10BQ8IUB3 73 aa7.47□□□□□ -1.21
HERC1-204ENST00000559715 STOML3Q8TAV4 291 aa7.47□□□□□ -1.21
HERC1-204ENST00000559715 C8orf49Q96NF6 230 aa7.47□□□□□ -1.21
HERC1-204ENST00000559715 SH3BGRL3Q9H299 93 aa7.47□□□□□ -1.21
HERC1-204ENST00000559715 MRPL16Q9NX20 251 aaKnown RBP7.47□□□□□ -1.21
HERC1-204ENST00000559715 MDFICQ9P1T7 246 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms