RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 GCHFRP30047 84 aa5.76□□□□□ -1.49
SNX1-207ENST00000559401 ZNF415Q09FC8 603 aa5.76□□□□□ -1.49
SNX1-207ENST00000559401 ANXA2RQ3ZCQ2 193 aa5.76□□□□□ -1.49
SNX1-207ENST00000559401 RNF212Q495C1 297 aa5.76□□□□□ -1.49
SNX1-207ENST00000559401 Q6ZQT7 251 aa5.76□□□□□ -1.49
SNX1-207ENST00000559401 TMPRSS5Q9H3S3 457 aa5.76□□□□□ -1.49
SNX1-207ENST00000559401 MRPL16Q9NX20 251 aaKnown RBP5.76□□□□□ -1.49
SNX1-207ENST00000559401 TP53TG3Q9ULZ0 132 aa5.76□□□□□ -1.49
SNX1-207ENST00000559401 EPPK1P58107 5090 aaKnown RBP5.75□□□□□ -1.49
SNX1-207ENST00000559401 TRAV26-1A0A087WT03 109 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 TRAV8-1A0A0A6YYK1 113 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 TRBV7-9A0A0J9YWB2 115 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 F6UZH7 168 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 K7EQM0 130 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 CXorf1O96002 111 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 CCL18P55774 89 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 TCL1AP56279 114 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 DAZ2Q13117 558 aaKnown RBP5.75□□□□□ -1.49
SNX1-207ENST00000559401 TMEM183BQ1AE95 376 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 AKR1C8PQ5T2L2 129 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 IBA57Q5T440 356 aaKnown RBP5.75□□□□□ -1.49
SNX1-207ENST00000559401 FAM159AQ6UWV7 190 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 TMEM183AQ8IXX5 376 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 LINC00612Q8N6U2 182 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 C11orf72Q8NBR9 251 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 SGK494Q96LW2 274 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 LINC00467Q9BRT7 94 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 NDFIP1Q9BT67 221 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 TREM1Q9NP99 234 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 TMEM167BQ9NRX6 74 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 KLF12Q9Y4X4 402 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 LENEPQ9Y5L5 61 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 NACAE9PAV3 2078 aa5.75□□□□□ -1.49
SNX1-207ENST00000559401 TRGV11A0A075B6L2 103 aa5.74□□□□□ -1.49
SNX1-207ENST00000559401 CTXND1A0A1B0GTU2 59 aa5.74□□□□□ -1.49
SNX1-207ENST00000559401 TAAR5O14804 337 aa5.74□□□□□ -1.49
SNX1-207ENST00000559401 IFNA7P01567 189 aa5.74□□□□□ -1.49
SNX1-207ENST00000559401 IGHV3-53P01767 116 aa5.74□□□□□ -1.49
SNX1-207ENST00000559401 HOXA5P20719 270 aa5.74□□□□□ -1.49
SNX1-207ENST00000559401 SUMO1P63165 101 aaKnown RBP5.74□□□□□ -1.49
SNX1-207ENST00000559401 SSX7Q7RTT5 188 aa5.74□□□□□ -1.49
SNX1-207ENST00000559401 C5orf17Q8NAS9 161 aa5.74□□□□□ -1.49
SNX1-207ENST00000559401 TMED6Q8WW62 240 aa5.74□□□□□ -1.49
SNX1-207ENST00000559401 ST6GAL2Q96JF0 529 aa5.74□□□□□ -1.49
SNX1-207ENST00000559401 TRAV21A0A0B4J279 112 aa5.73□□□□□ -1.49
SNX1-207ENST00000559401 SERTM2A0A1B0GWG4 89 aa5.73□□□□□ -1.49
SNX1-207ENST00000559401 GGTLC3B5MD39 225 aa5.73□□□□□ -1.49
SNX1-207ENST00000559401 G3V3Q6 166 aa5.73□□□□□ -1.49
SNX1-207ENST00000559401 SPINK4O60575 86 aa5.73□□□□□ -1.49
SNX1-207ENST00000559401 TCRAP04437 139 aa5.73□□□□□ -1.49
SNX1-207ENST00000559401 FGF8P55075 233 aaPredicted RBP5.73□□□□□ -1.49
SNX1-207ENST00000559401 UBE2G2P60604 165 aa5.73□□□□□ -1.49
SNX1-207ENST00000559401 ZFP69Q49AA0 526 aa5.73□□□□□ -1.49
SNX1-207ENST00000559401 Q6AWC8 147 aa5.73□□□□□ -1.49
SNX1-207ENST00000559401 ARL6IP6Q8N6S5 226 aa5.73□□□□□ -1.49
SNX1-207ENST00000559401 MAP1LC3B2A6NCE7 125 aa5.72□□□□□ -1.49
SNX1-207ENST00000559401 FAM3BP58499 235 aaPredicted RBP5.72□□□□□ -1.49
SNX1-207ENST00000559401 ZNF726P1Q15940 193 aa5.72□□□□□ -1.49
SNX1-207ENST00000559401 LGALS9BQ3B8N2 356 aa5.72□□□□□ -1.49
SNX1-207ENST00000559401 SOHLH1Q5JUK2 328 aa5.72□□□□□ -1.49
SNX1-207ENST00000559401 LINC00336Q6ZUF6 198 aa5.72□□□□□ -1.49
SNX1-207ENST00000559401 PRNTQ86SH4 94 aa5.72□□□□□ -1.49
SNX1-207ENST00000559401 CYB561D1Q8N8Q1 229 aa5.72□□□□□ -1.49
SNX1-207ENST00000559401 MAP1LC3BQ9GZQ8 125 aa5.72□□□□□ -1.49
SNX1-207ENST00000559401 SDF2L1Q9HCN8 221 aa5.72□□□□□ -1.49
SNX1-207ENST00000559401 MDFICQ9P1T7 246 aa5.72□□□□□ -1.49
SNX1-207ENST00000559401 EPDR1Q9UM22 224 aa5.72□□□□□ -1.49
SNX1-207ENST00000559401 PSG8Q9UQ74 426 aa5.72□□□□□ -1.49
SNX1-207ENST00000559401 TRGV4A0A0C4DH28 118 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 KANTRA0A1W2PQU2 76 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 A0A1W2PRE2 83 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 PAX4O43316 350 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 GNRH2O43555 120 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 PFDN1O60925 122 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 GCGP01275 180 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 PPT1P50897 306 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 FLI1Q01543 452 aaPredicted RBP5.71□□□□□ -1.5
SNX1-207ENST00000559401 KCNRGQ8N5I3 272 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 STOML3Q8TAV4 291 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 SUN5Q8TC36 379 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 TVP23CQ96ET8 276 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 KCNS1Q96KK3 526 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 C8orf49Q96NF6 230 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 SPXQ9BT56 116 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 ZNF471Q9BX82 626 aaPredicted RBP5.71□□□□□ -1.5
SNX1-207ENST00000559401 CYTL1Q9NRR1 136 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 LINC00588Q9Y4M8 146 aa5.71□□□□□ -1.5
SNX1-207ENST00000559401 BIRC6Q9NR09 4857 aa5.7□□□□□ -1.5
SNX1-207ENST00000559401 TRAV34A0A0B4J273 112 aa5.7□□□□□ -1.5
SNX1-207ENST00000559401 A0A1B0GV50 99 aa5.7□□□□□ -1.5
SNX1-207ENST00000559401 PRSS29PA6NIE9 313 aa5.7□□□□□ -1.5
SNX1-207ENST00000559401 H3BNG1 76 aa5.7□□□□□ -1.5
SNX1-207ENST00000559401 PEX7O00628 323 aa5.7□□□□□ -1.5
SNX1-207ENST00000559401 TYMSP04818 313 aa5.7□□□□□ -1.5
SNX1-207ENST00000559401 SFTA3P0C7M3 94 aa5.7□□□□□ -1.5
SNX1-207ENST00000559401 ZNF345Q14585 488 aa5.7□□□□□ -1.5
SNX1-207ENST00000559401 SMUG1Q53HV7 270 aa5.7□□□□□ -1.5
SNX1-207ENST00000559401 C1orf134Q5TEV5 83 aa5.7□□□□□ -1.5
SNX1-207ENST00000559401 TMEM75Q8N9X5 138 aa5.7□□□□□ -1.5
SNX1-207ENST00000559401 ZNRF2Q8NHG8 242 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms