RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 PRNTQ86SH4 94 aa15.64■□□□□ 0.09
SNX1-206ENST00000559389 NIPSNAP3BQ9BS92 247 aa15.64■□□□□ 0.09
SNX1-206ENST00000559389 TREM1Q9NP99 234 aa15.64■□□□□ 0.09
SNX1-206ENST00000559389 LOC102723971A0A1B0GUV8 181 aa15.63■□□□□ 0.09
SNX1-206ENST00000559389 RNASE4P34096 147 aaKnown RBP15.63■□□□□ 0.09
SNX1-206ENST00000559389 TAS2R60P59551 318 aa15.63■□□□□ 0.09
SNX1-206ENST00000559389 FMC1Q96HJ9 113 aa15.63■□□□□ 0.09
SNX1-206ENST00000559389 VAX2Q9UIW0 290 aa15.63■□□□□ 0.09
SNX1-206ENST00000559389 KLF12Q9Y4X4 402 aa15.63■□□□□ 0.09
SNX1-206ENST00000559389 TRBV6-1A0A0K0K1D8 114 aa15.62■□□□□ 0.09
SNX1-206ENST00000559389 ZNF324O75467 553 aaPredicted RBP15.62■□□□□ 0.09
SNX1-206ENST00000559389 TMEM183BQ1AE95 376 aa15.62■□□□□ 0.09
SNX1-206ENST00000559389 RRN3P1Q2M238 152 aa15.62■□□□□ 0.09
SNX1-206ENST00000559389 LINC01587Q99440 93 aa15.62■□□□□ 0.09
SNX1-206ENST00000559389 ZNF705GA8MUZ8 300 aaPredicted RBP15.61■□□□□ 0.09
SNX1-206ENST00000559389 DEFB4AO15263 64 aa15.61■□□□□ 0.09
SNX1-206ENST00000559389 UBE2G1P62253 170 aa15.61■□□□□ 0.09
SNX1-206ENST00000559389 SAPCD1Q5SSQ6 148 aa15.61■□□□□ 0.09
SNX1-206ENST00000559389 Q6AWC8 147 aa15.61■□□□□ 0.09
SNX1-206ENST00000559389 PCNPQ8WW12 178 aaKnown RBP15.61■□□□□ 0.09
SNX1-206ENST00000559389 C8orf49Q96NF6 230 aa15.61■□□□□ 0.09
SNX1-206ENST00000559389 PYGO2Q9BRQ0 406 aa15.61■□□□□ 0.09
SNX1-206ENST00000559389 PDE6DO43924 150 aa15.6■□□□□ 0.09
SNX1-206ENST00000559389 WWC2-AS2Q96NR7 200 aa15.6■□□□□ 0.09
SNX1-206ENST00000559389 PRM2P04554 102 aa15.59■□□□□ 0.09
SNX1-206ENST00000559389 Q6ZQT7 251 aa15.59■□□□□ 0.09
SNX1-206ENST00000559389 LINC00467Q9BRT7 94 aa15.59■□□□□ 0.09
SNX1-206ENST00000559389 NBEAL2Q6ZNJ1 2754 aa15.59■□□□□ 0.09
SNX1-206ENST00000559389 TGP01266 2768 aa15.58■□□□□ 0.08
SNX1-206ENST00000559389 TMEM189A5PLL7 270 aa15.58■□□□□ 0.08
SNX1-206ENST00000559389 RBFOX3A6NFN3 312 aa15.58■□□□□ 0.08
SNX1-206ENST00000559389 LTAP01374 205 aa15.58■□□□□ 0.08
SNX1-206ENST00000559389 S100A9P06702 114 aaKnown RBP15.58■□□□□ 0.08
SNX1-206ENST00000559389 ZNF506Q5JVG8 444 aa15.58■□□□□ 0.08
SNX1-206ENST00000559389 ZFP30Q9Y2G7 519 aa15.58■□□□□ 0.08
SNX1-206ENST00000559389 AZU1P20160 251 aa15.57■□□□□ 0.08
SNX1-206ENST00000559389 SMUG1Q53HV7 270 aa15.57■□□□□ 0.08
SNX1-206ENST00000559389 COX8CQ7Z4L0 72 aa15.57■□□□□ 0.08
SNX1-206ENST00000559389 RNASE8Q8TDE3 154 aaKnown RBP15.57■□□□□ 0.08
SNX1-206ENST00000559389 TMEM263Q8WUH6 116 aaKnown RBP15.57■□□□□ 0.08
SNX1-206ENST00000559389 STAB2Q8WWQ8 2551 aa15.56■□□□□ 0.08
SNX1-206ENST00000559389 TRAV21A0A0B4J279 112 aa15.56■□□□□ 0.08
SNX1-206ENST00000559389 PLAC8L1A1L4L8 177 aa15.56■□□□□ 0.08
SNX1-206ENST00000559389 GCGP01275 180 aa15.56■□□□□ 0.08
SNX1-206ENST00000559389 HTN1P15515 57 aa15.56■□□□□ 0.08
SNX1-206ENST00000559389 ZNF80P51504 273 aaPredicted RBP15.56■□□□□ 0.08
SNX1-206ENST00000559389 TOR2AQ5JU69 321 aa15.56■□□□□ 0.08
SNX1-206ENST00000559389 C16orf74Q96GX8 76 aa15.56■□□□□ 0.08
SNX1-206ENST00000559389 FAM210AQ96ND0 272 aa15.56■□□□□ 0.08
SNX1-206ENST00000559389 DERL1Q9BUN8 251 aa15.56■□□□□ 0.08
SNX1-206ENST00000559389 RGS13O14921 159 aa15.55■□□□□ 0.08
SNX1-206ENST00000559389 RPL35P42766 123 aaKnown RBP15.55■□□□□ 0.08
SNX1-206ENST00000559389 IFITM2Q01629 132 aa15.55■□□□□ 0.08
SNX1-206ENST00000559389 ZNF493Q6ZR52 646 aa15.55■□□□□ 0.08
SNX1-206ENST00000559389 ZNF767PQ75MW2 155 aa15.55■□□□□ 0.08
SNX1-206ENST00000559389 EIF4E3Q8N5X7 224 aaKnown RBP15.55■□□□□ 0.08
SNX1-206ENST00000559389 IGHV1OR15-1A0A075B7D0 117 aa15.54■□□□□ 0.08
SNX1-206ENST00000559389 PFN1P07737 140 aaKnown RBP15.54■□□□□ 0.08
SNX1-206ENST00000559389 EMP1P54849 157 aa15.54■□□□□ 0.08
SNX1-206ENST00000559389 ANXA2RQ3ZCQ2 193 aa15.54■□□□□ 0.08
SNX1-206ENST00000559389 TMEM183AQ8IXX5 376 aa15.54■□□□□ 0.08
SNX1-206ENST00000559389 IL17DQ8TAD2 202 aa15.54■□□□□ 0.08
SNX1-206ENST00000559389 ZC2HC1AQ96GY0 325 aa15.54■□□□□ 0.08
SNX1-206ENST00000559389 CELA1Q9UNI1 258 aa15.54■□□□□ 0.08
SNX1-206ENST00000559389 MUC21Q5SSG8 566 aa15.53■□□□□ 0.08
SNX1-206ENST00000559389 MED9Q9NWA0 146 aa15.53■□□□□ 0.08
SNX1-206ENST00000559389 CBY3A6NI87 242 aa15.52■□□□□ 0.08
SNX1-206ENST00000559389 TMEM250H0YL14 139 aa15.52■□□□□ 0.08
SNX1-206ENST00000559389 NDUFS6O75380 124 aaKnown RBP15.52■□□□□ 0.08
SNX1-206ENST00000559389 EIF5A2Q9GZV4 153 aaKnown RBP15.52■□□□□ 0.08
SNX1-206ENST00000559389 NAGKQ9UJ70 344 aa15.52■□□□□ 0.08
SNX1-206ENST00000559389 TEX48A0A1B0GUV7 120 aa15.51■□□□□ 0.07
SNX1-206ENST00000559389 TDRG1Q3Y452 100 aa15.51■□□□□ 0.07
SNX1-206ENST00000559389 CENPWQ5EE01 88 aa15.51■□□□□ 0.07
SNX1-206ENST00000559389 FAM159AQ6UWV7 190 aa15.51■□□□□ 0.07
SNX1-206ENST00000559389 BAGE2Q86Y30 109 aa15.51■□□□□ 0.07
SNX1-206ENST00000559389 NHLRC2Q8NBF2 726 aa15.51■□□□□ 0.07
SNX1-206ENST00000559389 C11orf72Q8NBR9 251 aa15.51■□□□□ 0.07
SNX1-206ENST00000559389 C11orf45Q8TAV5 145 aa15.51■□□□□ 0.07
SNX1-206ENST00000559389 MLST8Q9BVC4 326 aa15.51■□□□□ 0.07
SNX1-206ENST00000559389 DKK2Q9UBU2 259 aa15.51■□□□□ 0.07
SNX1-206ENST00000559389 RAB14P61106 215 aa15.5■□□□□ 0.07
SNX1-206ENST00000559389 IBA57Q5T440 356 aaKnown RBP15.5■□□□□ 0.07
SNX1-206ENST00000559389 FAM222AQ5U5X8 452 aa15.5■□□□□ 0.07
SNX1-206ENST00000559389 MUC7Q8TAX7 377 aa15.5■□□□□ 0.07
SNX1-206ENST00000559389 C11orf21Q9P2W6 132 aa15.5■□□□□ 0.07
SNX1-206ENST00000559389 TP53TG3Q9ULZ0 132 aa15.5■□□□□ 0.07
SNX1-206ENST00000559389 TRBV20OR9-2A0A075B6H5 130 aa15.49■□□□□ 0.07
SNX1-206ENST00000559389 CXorf65A6NEN9 183 aa15.49■□□□□ 0.07
SNX1-206ENST00000559389 SPART-AS1P0CW21 52 aa15.49■□□□□ 0.07
SNX1-206ENST00000559389 CRIP1P50238 77 aa15.49■□□□□ 0.07
SNX1-206ENST00000559389 TRGV11A0A075B6L2 103 aa15.48■□□□□ 0.07
SNX1-206ENST00000559389 SH2D1AO60880 128 aa15.48■□□□□ 0.07
SNX1-206ENST00000559389 TCL1AP56279 114 aa15.48■□□□□ 0.07
SNX1-206ENST00000559389 NANOS2P60321 138 aaKnown RBP15.48■□□□□ 0.07
SNX1-206ENST00000559389 ZNF674Q2M3X9 581 aa15.48■□□□□ 0.07
SNX1-206ENST00000559389 CLLU1Q5K131 121 aa15.48■□□□□ 0.07
SNX1-206ENST00000559389 SMIM12Q96EX1 92 aa15.48■□□□□ 0.07
SNX1-206ENST00000559389 PARLQ9H300 379 aa15.48■□□□□ 0.07
SNX1-206ENST00000559389 SDF2L1Q9HCN8 221 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms