RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 ATP6V0CP27449 155 aa10.72□□□□□ -0.69
RPL28-206ENST00000558752 RNASE4P34096 147 aaKnown RBP10.72□□□□□ -0.69
RPL28-206ENST00000558752 C6orf223Q8N319 242 aa10.72□□□□□ -0.69
RPL28-206ENST00000558752 EIF4E3Q8N5X7 224 aaKnown RBP10.72□□□□□ -0.69
RPL28-206ENST00000558752 HSD17B11Q8NBQ5 300 aa10.72□□□□□ -0.69
RPL28-206ENST00000558752 FXYD6-FXYD2A0A087WZ82 144 aa10.71□□□□□ -0.69
RPL28-206ENST00000558752 DIRC3C9JPN6 131 aa10.71□□□□□ -0.69
RPL28-206ENST00000558752 NACAE9PAV3 2078 aa10.71□□□□□ -0.69
RPL28-206ENST00000558752 STAG3L2P0CL84 134 aa10.71□□□□□ -0.69
RPL28-206ENST00000558752 STAG3L3P0CL85 134 aa10.71□□□□□ -0.69
RPL28-206ENST00000558752 CDC34P49427 236 aaPredicted RBP10.71□□□□□ -0.69
RPL28-206ENST00000558752 RAB2AP61019 212 aa10.71□□□□□ -0.69
RPL28-206ENST00000558752 ZFAND2AQ8N6M9 145 aa10.71□□□□□ -0.69
RPL28-206ENST00000558752 LINC00612Q8N6U2 182 aa10.71□□□□□ -0.69
RPL28-206ENST00000558752 ACTR3CQ9C0K3 210 aaPredicted RBP10.71□□□□□ -0.69
RPL28-206ENST00000558752 SERTM2A0A1B0GWG4 89 aa10.7□□□□□ -0.7
RPL28-206ENST00000558752 F5H768 121 aa10.7□□□□□ -0.7
RPL28-206ENST00000558752 CD300CQ08708 224 aa10.7□□□□□ -0.7
RPL28-206ENST00000558752 MAPKAPK5-AS1Q8N8E1 139 aa10.7□□□□□ -0.7
RPL28-206ENST00000558752 SUN5Q8TC36 379 aa10.7□□□□□ -0.7
RPL28-206ENST00000558752 RAB24Q969Q5 203 aa10.7□□□□□ -0.7
RPL28-206ENST00000558752 LRP1BQ9NZR2 4599 aa10.69□□□□□ -0.7
RPL28-206ENST00000558752 RNF222A6NCQ9 220 aa10.69□□□□□ -0.7
RPL28-206ENST00000558752 RGS13O14921 159 aa10.69□□□□□ -0.7
RPL28-206ENST00000558752 NUDT3O95989 172 aa10.69□□□□□ -0.7
RPL28-206ENST00000558752 CXorf1O96002 111 aa10.69□□□□□ -0.7
RPL28-206ENST00000558752 TNP2Q05952 138 aa10.69□□□□□ -0.7
RPL28-206ENST00000558752 BTN1A1Q13410 526 aa10.69□□□□□ -0.7
RPL28-206ENST00000558752 IBA57Q5T440 356 aaKnown RBP10.69□□□□□ -0.7
RPL28-206ENST00000558752 ST6GAL2Q96JF0 529 aa10.69□□□□□ -0.7
RPL28-206ENST00000558752 HYLS1Q96M11 299 aa10.69□□□□□ -0.7
RPL28-206ENST00000558752 TMEM167BQ9NRX6 74 aa10.69□□□□□ -0.7
RPL28-206ENST00000558752 RPL7L1Q6DKI1 246 aaKnown RBP10.68□□□□□ -0.7
RPL28-206ENST00000558752 C18orf15Q96N68 181 aa10.68□□□□□ -0.7
RPL28-206ENST00000558752 IGHV1OR15-1A0A075B7D0 117 aa10.67□□□□□ -0.7
RPL28-206ENST00000558752 ARL14EPLP0DKL9 152 aa10.67□□□□□ -0.7
RPL28-206ENST00000558752 ZNRF2Q8NHG8 242 aa10.67□□□□□ -0.7
RPL28-206ENST00000558752 FBLL1A6NHQ2 334 aaKnown RBP10.66□□□□□ -0.7
RPL28-206ENST00000558752 H3BNG1 76 aa10.66□□□□□ -0.7
RPL28-206ENST00000558752 K7EQM0 130 aa10.66□□□□□ -0.7
RPL28-206ENST00000558752 HMGB3O15347 200 aaKnown RBP10.66□□□□□ -0.7
RPL28-206ENST00000558752 GCHFRP30047 84 aa10.66□□□□□ -0.7
RPL28-206ENST00000558752 TTC32Q5I0X7 151 aa10.66□□□□□ -0.7
RPL28-206ENST00000558752 Q6AWC8 147 aa10.66□□□□□ -0.7
RPL28-206ENST00000558752 C11orf72Q8NBR9 251 aa10.66□□□□□ -0.7
RPL28-206ENST00000558752 GSN-AS1Q9NRJ2 163 aa10.66□□□□□ -0.7
RPL28-206ENST00000558752 GAGE12BA1L429 117 aa10.65□□□□□ -0.7
RPL28-206ENST00000558752 HMSDA8MTL9 139 aa10.65□□□□□ -0.7
RPL28-206ENST00000558752 G3V3Q6 166 aa10.65□□□□□ -0.7
RPL28-206ENST00000558752 GAGE7O76087 117 aa10.65□□□□□ -0.7
RPL28-206ENST00000558752 GAGE12FP0CL80 117 aa10.65□□□□□ -0.7
RPL28-206ENST00000558752 GAGE12GP0CL81 117 aa10.65□□□□□ -0.7
RPL28-206ENST00000558752 GAGE12IP0CL82 117 aa10.65□□□□□ -0.7
RPL28-206ENST00000558752 TCL1AP56279 114 aa10.65□□□□□ -0.7
RPL28-206ENST00000558752 AKR1C8PQ5T2L2 129 aa10.65□□□□□ -0.7
RPL28-206ENST00000558752 GOLT1AQ6ZVE7 132 aa10.65□□□□□ -0.7
RPL28-206ENST00000558752 C5orf17Q8NAS9 161 aa10.65□□□□□ -0.7
RPL28-206ENST00000558752 ARPC5LQ9BPX5 153 aa10.65□□□□□ -0.7
RPL28-206ENST00000558752 NKX6-2Q9C056 277 aaPredicted RBP10.65□□□□□ -0.7
RPL28-206ENST00000558752 SH3BGRL3Q9H299 93 aa10.65□□□□□ -0.7
RPL28-206ENST00000558752 TP53TG3Q9ULZ0 132 aa10.65□□□□□ -0.7
RPL28-206ENST00000558752 APOBP04114 4563 aaKnown RBP10.65□□□□□ -0.71
RPL28-206ENST00000558752 TRGV2A0A075B6R0 118 aa10.64□□□□□ -0.71
RPL28-206ENST00000558752 CTXND1A0A1B0GTU2 59 aa10.64□□□□□ -0.71
RPL28-206ENST00000558752 A0A1W2PRE2 83 aa10.64□□□□□ -0.71
RPL28-206ENST00000558752 ARPC5O15511 151 aa10.64□□□□□ -0.71
RPL28-206ENST00000558752 SPINK4O60575 86 aa10.64□□□□□ -0.71
RPL28-206ENST00000558752 EIF3GO75821 320 aaKnown RBP eCLIP10.64□□□□□ -0.711e-17■□□□□ 9.1
RPL28-206ENST00000558752 SLAQ13239 276 aa10.64□□□□□ -0.71
RPL28-206ENST00000558752 OR5I1Q13606 314 aa10.64□□□□□ -0.71
RPL28-206ENST00000558752 FAM159AQ6UWV7 190 aa10.64□□□□□ -0.71
RPL28-206ENST00000558752 Q8TAT8 98 aa10.64□□□□□ -0.71
RPL28-206ENST00000558752 KLF12Q9Y4X4 402 aa10.64□□□□□ -0.71
RPL28-206ENST00000558752 TRAV21A0A0B4J279 112 aa10.63□□□□□ -0.71
RPL28-206ENST00000558752 SUMO1P63165 101 aaKnown RBP10.63□□□□□ -0.71
RPL28-206ENST00000558752 ZNF345Q14585 488 aa10.63□□□□□ -0.71
RPL28-206ENST00000558752 PRR9Q5T870 116 aa10.63□□□□□ -0.71
RPL28-206ENST00000558752 Q6ZTI0 123 aa10.63□□□□□ -0.71
RPL28-206ENST00000558752 Q8N1X5 172 aa10.63□□□□□ -0.71
RPL28-206ENST00000558752 SPXQ9BT56 116 aa10.63□□□□□ -0.71
RPL28-206ENST00000558752 NDFIP1Q9BT67 221 aa10.63□□□□□ -0.71
RPL28-206ENST00000558752 Q9H8V8 135 aa10.63□□□□□ -0.71
RPL28-206ENST00000558752 TREM1Q9NP99 234 aa10.63□□□□□ -0.71
RPL28-206ENST00000558752 EPDR1Q9UM22 224 aa10.63□□□□□ -0.71
RPL28-206ENST00000558752 LINC00588Q9Y4M8 146 aa10.63□□□□□ -0.71
RPL28-206ENST00000558752 TRGV11A0A075B6L2 103 aa10.62□□□□□ -0.71
RPL28-206ENST00000558752 TRGV1A0A0A0MS02 117 aa10.62□□□□□ -0.71
RPL28-206ENST00000558752 A0A0D9SG52 128 aa10.62□□□□□ -0.71
RPL28-206ENST00000558752 TCRAP04437 139 aa10.62□□□□□ -0.71
RPL28-206ENST00000558752 BTF3P20290 206 aaKnown RBP10.62□□□□□ -0.71
RPL28-206ENST00000558752 ZNF415Q09FC8 603 aa10.62□□□□□ -0.71
RPL28-206ENST00000558752 TDRG1Q3Y452 100 aa10.62□□□□□ -0.71
RPL28-206ENST00000558752 SSX7Q7RTT5 188 aa10.62□□□□□ -0.71
RPL28-206ENST00000558752 KCNRGQ8N5I3 272 aa10.62□□□□□ -0.71
RPL28-206ENST00000558752 CYTL1Q9NRR1 136 aa10.62□□□□□ -0.71
RPL28-206ENST00000558752 RPH3ALQ9UNE2 315 aa10.62□□□□□ -0.71
RPL28-206ENST00000558752 SPATA12Q7Z6I5 190 aa10.61□□□□□ -0.71
RPL28-206ENST00000558752 KCNS1Q96KK3 526 aa10.61□□□□□ -0.71
RPL28-206ENST00000558752 DNAH5Q8TE73 4624 aa10.61□□□□□ -0.71
RPL28-206ENST00000558752 TRAV26-1A0A087WT03 109 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms