RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 SGK494Q96LW2 274 aa8.83□□□□□ -1
SMAD3-205ENST00000558428 EPDR1Q9UM22 224 aa8.83□□□□□ -1
SMAD3-205ENST00000558428 LENEPQ9Y5L5 61 aa8.83□□□□□ -1
SMAD3-205ENST00000558428 RYR2Q92736 4967 aa8.83□□□□□ -1
SMAD3-205ENST00000558428 TRAV10A0A0B4J240 114 aa8.82□□□□□ -1
SMAD3-205ENST00000558428 PLAC8L1A1L4L8 177 aa8.82□□□□□ -1
SMAD3-205ENST00000558428 FAM74A7A6NL05 159 aa8.82□□□□□ -1
SMAD3-205ENST00000558428 IFNA7P01567 189 aa8.82□□□□□ -1
SMAD3-205ENST00000558428 H2AFB1P0C5Y9 115 aa8.82□□□□□ -1
SMAD3-205ENST00000558428 ZNF493Q6ZR52 646 aa8.82□□□□□ -1
SMAD3-205ENST00000558428 CYB561D1Q8N8Q1 229 aa8.82□□□□□ -1
SMAD3-205ENST00000558428 RNASE8Q8TDE3 154 aaKnown RBP8.82□□□□□ -1
SMAD3-205ENST00000558428 ATG101Q9BSB4 218 aa8.82□□□□□ -1
SMAD3-205ENST00000558428 NKX6-2Q9C056 277 aaPredicted RBP8.82□□□□□ -1
SMAD3-205ENST00000558428 ALMS1Q8TCU4 4167 aa8.82□□□□□ -1
SMAD3-205ENST00000558428 LYRM9A8MSI8 78 aa8.81□□□□□ -1
SMAD3-205ENST00000558428 RGS13O14921 159 aa8.81□□□□□ -1
SMAD3-205ENST00000558428 RAB5CP51148 216 aa8.81□□□□□ -1
SMAD3-205ENST00000558428 DAD1P61803 113 aa8.81□□□□□ -1
SMAD3-205ENST00000558428 Q6ZQT7 251 aa8.81□□□□□ -1
SMAD3-205ENST00000558428 C2CD4CQ8TF44 421 aa8.81□□□□□ -1
SMAD3-205ENST00000558428 NDFIP1Q9BT67 221 aa8.81□□□□□ -1
SMAD3-205ENST00000558428 TREM1Q9NP99 234 aa8.81□□□□□ -1
SMAD3-205ENST00000558428 TIMM8BQ9Y5J9 83 aaPredicted RBP8.81□□□□□ -1
SMAD3-205ENST00000558428 IGHV1OR15-1A0A075B7D0 117 aa8.8□□□□□ -1
SMAD3-205ENST00000558428 DEFB131BA0A096LNP1 70 aa8.8□□□□□ -1
SMAD3-205ENST00000558428 CBY3A6NI87 242 aa8.8□□□□□ -1
SMAD3-205ENST00000558428 SNURFLB1AK76 121 aa8.8□□□□□ -1
SMAD3-205ENST00000558428 F6UZH7 168 aa8.8□□□□□ -1
SMAD3-205ENST00000558428 SULT1A2P50226 295 aa8.8□□□□□ -1
SMAD3-205ENST00000558428 NKX2-5P52952 324 aaPredicted RBP8.8□□□□□ -1
SMAD3-205ENST00000558428 FLI1Q01543 452 aaPredicted RBP8.8□□□□□ -1
SMAD3-205ENST00000558428 CST9LP1Q5W188 147 aa8.8□□□□□ -1
SMAD3-205ENST00000558428 Q6AWC8 147 aa8.8□□□□□ -1
SMAD3-205ENST00000558428 EIF4E3Q8N5X7 224 aaKnown RBP8.8□□□□□ -1
SMAD3-205ENST00000558428 TMEM75Q8N9X5 138 aa8.8□□□□□ -1
SMAD3-205ENST00000558428 TVP23CQ96ET8 276 aa8.8□□□□□ -1
SMAD3-205ENST00000558428 LINC00467Q9BRT7 94 aa8.8□□□□□ -1
SMAD3-205ENST00000558428 NOP10Q9NPE3 64 aaKnown RBP8.8□□□□□ -1
SMAD3-205ENST00000558428 PSG8Q9UQ74 426 aa8.8□□□□□ -1
SMAD3-205ENST00000558428 DNAH1Q9P2D7 4330 aa8.8□□□□□ -1
SMAD3-205ENST00000558428 IGLL5B9A064 214 aa8.79□□□□□ -1
SMAD3-205ENST00000558428 PEX7O00628 323 aa8.79□□□□□ -1
SMAD3-205ENST00000558428 PAGE4O60829 102 aa8.79□□□□□ -1
SMAD3-205ENST00000558428 DEFB130BP0DP73 79 aa8.79□□□□□ -1
SMAD3-205ENST00000558428 DEFB130AP0DP74 79 aa8.79□□□□□ -1
SMAD3-205ENST00000558428 ANXA2RQ3ZCQ2 193 aa8.79□□□□□ -1
SMAD3-205ENST00000558428 PRNTQ86SH4 94 aa8.79□□□□□ -1
SMAD3-205ENST00000558428 ZNF680Q8NEM1 530 aa8.79□□□□□ -1
SMAD3-205ENST00000558428 HIST1H2BAQ96A08 127 aa8.79□□□□□ -1
SMAD3-205ENST00000558428 ARL2-SNX15V9GYD0 113 aa8.79□□□□□ -1
SMAD3-205ENST00000558428 HYDINQ4G0P3 5121 aa8.79□□□□□ -1
SMAD3-205ENST00000558428 TRAV34A0A0B4J273 112 aa8.78□□□□□ -1
SMAD3-205ENST00000558428 LCE6AA0A183 80 aa8.78□□□□□ -1
SMAD3-205ENST00000558428 FBLL1A6NHQ2 334 aaKnown RBP8.78□□□□□ -1
SMAD3-205ENST00000558428 IGLV2-11P01706 119 aa8.78□□□□□ -1
SMAD3-205ENST00000558428 HTN3P15516 51 aa8.78□□□□□ -1
SMAD3-205ENST00000558428 ATP5G3P48201 142 aa8.78□□□□□ -1
SMAD3-205ENST00000558428 PPT1P50897 306 aa8.78□□□□□ -1
SMAD3-205ENST00000558428 MUC21Q5SSG8 566 aa8.78□□□□□ -1
SMAD3-205ENST00000558428 LINC00479Q96M42 142 aa8.78□□□□□ -1
SMAD3-205ENST00000558428 C8orf49Q96NF6 230 aa8.78□□□□□ -1
SMAD3-205ENST00000558428 TP53TG3Q9ULZ0 132 aa8.78□□□□□ -1
SMAD3-205ENST00000558428 TRAV21A0A0B4J279 112 aa8.77□□□□□ -1.01
SMAD3-205ENST00000558428 TEX46H3BTG2 121 aa8.77□□□□□ -1.01
SMAD3-205ENST00000558428 C11orf72Q8NBR9 251 aa8.77□□□□□ -1.01
SMAD3-205ENST00000558428 TCEAL7Q9BRU2 100 aa8.77□□□□□ -1.01
SMAD3-205ENST00000558428 GSN-AS1Q9NRJ2 163 aa8.77□□□□□ -1.01
SMAD3-205ENST00000558428 NAGKQ9UJ70 344 aa8.77□□□□□ -1.01
SMAD3-205ENST00000558428 IGHV4-4A0A075B6R2 117 aa8.76□□□□□ -1.01
SMAD3-205ENST00000558428 TRAV1-1A0A0B4J248 108 aa8.76□□□□□ -1.01
SMAD3-205ENST00000558428 GCGP01275 180 aa8.76□□□□□ -1.01
SMAD3-205ENST00000558428 TCTAP57738 103 aa8.76□□□□□ -1.01
SMAD3-205ENST00000558428 UBE2G1P62253 170 aa8.76□□□□□ -1.01
SMAD3-205ENST00000558428 CCL20P78556 96 aa8.76□□□□□ -1.01
SMAD3-205ENST00000558428 DAZ2Q13117 558 aaKnown RBP8.76□□□□□ -1.01
SMAD3-205ENST00000558428 SMUG1Q53HV7 270 aa8.76□□□□□ -1.01
SMAD3-205ENST00000558428 SAPCD1Q5SSQ6 148 aa8.76□□□□□ -1.01
SMAD3-205ENST00000558428 IBA57Q5T440 356 aaKnown RBP8.76□□□□□ -1.01
SMAD3-205ENST00000558428 FAM159AQ6UWV7 190 aa8.76□□□□□ -1.01
SMAD3-205ENST00000558428 GNG13Q9P2W3 67 aa8.76□□□□□ -1.01
SMAD3-205ENST00000558428 GAGE12BA1L429 117 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 GAGE7O76087 117 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 GAGE12FP0CL80 117 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 GAGE12GP0CL81 117 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 GAGE12IP0CL82 117 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 AKR1C3P42330 323 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 ZNF80P51504 273 aaPredicted RBP8.75□□□□□ -1.01
SMAD3-205ENST00000558428 TCL1AP56279 114 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 ZNF415Q09FC8 603 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 TMEM183BQ1AE95 376 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 ALKAL2Q6UX46 152 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 Q86TA4 180 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 TMEM183AQ8IXX5 376 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 FMC1Q96HJ9 113 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 MANBALQ9NQG1 85 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 APLNQ9ULZ1 77 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 BOLA1Q9Y3E2 137 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 KLF12Q9Y4X4 402 aa8.75□□□□□ -1.01
SMAD3-205ENST00000558428 TRGV11A0A075B6L2 103 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms