RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 V9GYH0 126 aa11.83□□□□□ -0.52
TSPAN3-204ENST00000558394 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.82□□□□□ -0.52
TSPAN3-204ENST00000558394 IGKV2-40A0A087WW87 121 aaPredicted RBP11.82□□□□□ -0.52
TSPAN3-204ENST00000558394 TRAV4A0A0B4J268 109 aa11.82□□□□□ -0.52
TSPAN3-204ENST00000558394 C9orf170A2RU37 121 aa11.82□□□□□ -0.52
TSPAN3-204ENST00000558394 IGKV2D-40P01614 121 aaPredicted RBP11.82□□□□□ -0.52
TSPAN3-204ENST00000558394 ARL16Q0P5N6 197 aa11.82□□□□□ -0.52
TSPAN3-204ENST00000558394 Q6ZQT7 251 aa11.82□□□□□ -0.52
TSPAN3-204ENST00000558394 SCXQ7RTU7 201 aa11.82□□□□□ -0.52
TSPAN3-204ENST00000558394 EXOC3-AS1Q8N2X6 119 aa11.82□□□□□ -0.52
TSPAN3-204ENST00000558394 ZNF492Q9P255 531 aa11.82□□□□□ -0.52
TSPAN3-204ENST00000558394 LOC100131303A0A0U1RQF7 123 aa11.81□□□□□ -0.52
TSPAN3-204ENST00000558394 PFN1P07737 140 aaKnown RBP11.81□□□□□ -0.52
TSPAN3-204ENST00000558394 ZNF846Q147U1 533 aa11.81□□□□□ -0.52
TSPAN3-204ENST00000558394 FAM122CQ6P4D5 195 aa11.81□□□□□ -0.52
TSPAN3-204ENST00000558394 DEDD2Q8WXF8 326 aa11.81□□□□□ -0.52
TSPAN3-204ENST00000558394 GPN1Q9HCN4 374 aaPredicted RBP11.81□□□□□ -0.52
TSPAN3-204ENST00000558394 GSKIPQ9P0R6 139 aa11.81□□□□□ -0.52
TSPAN3-204ENST00000558394 TMEM14CQ9P0S9 112 aa11.81□□□□□ -0.52
TSPAN3-204ENST00000558394 TRGV11A0A075B6L2 103 aa11.8□□□□□ -0.52
TSPAN3-204ENST00000558394 L7N2F9 121 aa11.8□□□□□ -0.52
TSPAN3-204ENST00000558394 LECT2O14960 151 aa11.8□□□□□ -0.52
TSPAN3-204ENST00000558394 NDUFB4O95168 129 aa11.8□□□□□ -0.52
TSPAN3-204ENST00000558394 VAMP2P63027 116 aa11.8□□□□□ -0.52
TSPAN3-204ENST00000558394 LAGE3Q14657 143 aa11.8□□□□□ -0.52
TSPAN3-204ENST00000558394 TMEM183BQ1AE95 376 aa11.8□□□□□ -0.52
TSPAN3-204ENST00000558394 IAH1Q2TAA2 248 aaPredicted RBP11.8□□□□□ -0.52
TSPAN3-204ENST00000558394 TMEM183AQ8IXX5 376 aa11.8□□□□□ -0.52
TSPAN3-204ENST00000558394 RS1O15537 224 aa11.79□□□□□ -0.52
TSPAN3-204ENST00000558394 S100A5P33763 92 aa11.79□□□□□ -0.52
TSPAN3-204ENST00000558394 BCAP31P51572 246 aa11.79□□□□□ -0.52
TSPAN3-204ENST00000558394 ZNF138P52744 262 aa11.79□□□□□ -0.52
TSPAN3-204ENST00000558394 ASAH1Q13510 395 aa11.79□□□□□ -0.52
TSPAN3-204ENST00000558394 FAM159AQ6UWV7 190 aa11.79□□□□□ -0.52
TSPAN3-204ENST00000558394 C20orf85Q9H1P6 137 aa11.79□□□□□ -0.52
TSPAN3-204ENST00000558394 SLC39A9Q9NUM3 307 aa11.79□□□□□ -0.52
TSPAN3-204ENST00000558394 TRBV7-9A0A0J9YWB2 115 aa11.78□□□□□ -0.52
TSPAN3-204ENST00000558394 CCDC160A6NGH7 325 aa11.78□□□□□ -0.52
TSPAN3-204ENST00000558394 PYYP10082 97 aa11.78□□□□□ -0.52
TSPAN3-204ENST00000558394 WFDC2Q14508 124 aa11.78□□□□□ -0.52
TSPAN3-204ENST00000558394 ACOT6Q3I5F7 207 aaPredicted RBP11.78□□□□□ -0.52
TSPAN3-204ENST00000558394 CHAC1Q9BUX1 264 aa11.78□□□□□ -0.52
TSPAN3-204ENST00000558394 IGHV3-16A0A0C4DH30 117 aa11.77□□□□□ -0.53
TSPAN3-204ENST00000558394 C7orf66A4D0T2 115 aa11.77□□□□□ -0.53
TSPAN3-204ENST00000558394 RBFOX3A6NFN3 312 aa11.77□□□□□ -0.53
TSPAN3-204ENST00000558394 BAXQ07812 192 aa11.77□□□□□ -0.53
TSPAN3-204ENST00000558394 LINC01620Q4KN68 170 aa11.77□□□□□ -0.53
TSPAN3-204ENST00000558394 Q8TAT8 98 aa11.77□□□□□ -0.53
TSPAN3-204ENST00000558394 PRADC1Q9BSG0 188 aa11.77□□□□□ -0.53
TSPAN3-204ENST00000558394 UQCC1Q9NVA1 299 aa11.77□□□□□ -0.53
TSPAN3-204ENST00000558394 FAT3Q8TDW7 4589 aa11.77□□□□□ -0.53
TSPAN3-204ENST00000558394 TRAV8-3A0A0A6YYJ7 113 aa11.76□□□□□ -0.53
TSPAN3-204ENST00000558394 M0R2P5 195 aa11.76□□□□□ -0.53
TSPAN3-204ENST00000558394 RPL29P47914 159 aaKnown RBP11.76□□□□□ -0.53
TSPAN3-204ENST00000558394 ZNF266Q14584 549 aa11.76□□□□□ -0.53
TSPAN3-204ENST00000558394 BAK1Q16611 211 aa11.76□□□□□ -0.53
TSPAN3-204ENST00000558394 LELP1Q5T871 98 aa11.76□□□□□ -0.53
TSPAN3-204ENST00000558394 NAGKQ9UJ70 344 aa11.76□□□□□ -0.53
TSPAN3-204ENST00000558394 WDR83OSQ9Y284 106 aa11.76□□□□□ -0.53
TSPAN3-204ENST00000558394 CSN1S1P47710 185 aa11.75□□□□□ -0.53
TSPAN3-204ENST00000558394 CAV2P51636 162 aa11.75□□□□□ -0.53
TSPAN3-204ENST00000558394 KRTAP10-4P60372 401 aaPredicted RBP11.75□□□□□ -0.53
TSPAN3-204ENST00000558394 UBE2L5PA0A1B0GUS4 154 aa11.74□□□□□ -0.53
TSPAN3-204ENST00000558394 CST7O76096 145 aa11.74□□□□□ -0.53
TSPAN3-204ENST00000558394 MBPP02686 304 aaPredicted RBP11.74□□□□□ -0.53
TSPAN3-204ENST00000558394 GATA1P15976 413 aaPredicted RBP11.74□□□□□ -0.53
TSPAN3-204ENST00000558394 TOR2AQ5JU69 321 aa11.74□□□□□ -0.53
TSPAN3-204ENST00000558394 SPANXN2Q5MJ10 180 aa11.74□□□□□ -0.53
TSPAN3-204ENST00000558394 CIRBP-AS1Q8TBR5 109 aa11.74□□□□□ -0.53
TSPAN3-204ENST00000558394 FBLL1A6NHQ2 334 aaKnown RBP11.73□□□□□ -0.53
TSPAN3-204ENST00000558394 NBEAP1P0C6P0 100 aa11.73□□□□□ -0.53
TSPAN3-204ENST00000558394 INPP1P49441 399 aa11.73□□□□□ -0.53
TSPAN3-204ENST00000558394 TRIQKQ629K1 86 aa11.73□□□□□ -0.53
TSPAN3-204ENST00000558394 BAALCQ8WXS3 180 aa11.73□□□□□ -0.53
TSPAN3-204ENST00000558394 LSM5Q9Y4Y9 91 aaKnown RBP11.73□□□□□ -0.53
TSPAN3-204ENST00000558394 COX11Q9Y6N1 276 aa11.73□□□□□ -0.53
TSPAN3-204ENST00000558394 NDUFB6O95139 128 aa11.72□□□□□ -0.53
TSPAN3-204ENST00000558394 IGLV2-8P01709 118 aa11.72□□□□□ -0.53
TSPAN3-204ENST00000558394 RHOHQ15669 191 aa11.72□□□□□ -0.53
TSPAN3-204ENST00000558394 Q6AWC8 147 aa11.72□□□□□ -0.53
TSPAN3-204ENST00000558394 SLC25A29Q8N8R3 303 aa11.72□□□□□ -0.53
TSPAN3-204ENST00000558394 Q8N976 141 aa11.72□□□□□ -0.53
TSPAN3-204ENST00000558394 ATP6V0E2Q8NHE4 81 aa11.72□□□□□ -0.53
TSPAN3-204ENST00000558394 ATP5SQ99766 215 aa11.72□□□□□ -0.53
TSPAN3-204ENST00000558394 GTSF1LQ9H1H1 148 aa11.72□□□□□ -0.53
TSPAN3-204ENST00000558394 SH3BGRL3Q9H299 93 aa11.72□□□□□ -0.53
TSPAN3-204ENST00000558394 NAP1L6A6NFF2 107 aa11.71□□□□□ -0.53
TSPAN3-204ENST00000558394 RPL37AP61513 92 aaKnown RBP11.71□□□□□ -0.53
TSPAN3-204ENST00000558394 RMI2Q96E14 147 aa11.71□□□□□ -0.53
TSPAN3-204ENST00000558394 SLC25A2Q9BXI2 301 aa11.71□□□□□ -0.53
TSPAN3-204ENST00000558394 RBM38Q9H0Z9 239 aaKnown RBP11.71□□□□□ -0.53
TSPAN3-204ENST00000558394 OR51M1Q9H341 326 aa11.71□□□□□ -0.53
TSPAN3-204ENST00000558394 RBAKDNA6NC62 111 aa11.7□□□□□ -0.54
TSPAN3-204ENST00000558394 GGTLC3B5MD39 225 aa11.7□□□□□ -0.54
TSPAN3-204ENST00000558394 FGF7P21781 194 aa11.7□□□□□ -0.54
TSPAN3-204ENST00000558394 S100A11P31949 105 aa11.7□□□□□ -0.54
TSPAN3-204ENST00000558394 FLVCR2Q9UPI3 526 aa11.7□□□□□ -0.54
TSPAN3-204ENST00000558394 TRBV6-4A0A1B0GX49 114 aa11.69□□□□□ -0.54
TSPAN3-204ENST00000558394 C5orf51A6NDU8 294 aa11.69□□□□□ -0.54
TSPAN3-204ENST00000558394 FAM24AA6NFZ4 105 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms