RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 ATP6V0CP27449 155 aa11.65□□□□□ -0.54
NEDD4-212ENST00000557845 TCL1AP56279 114 aa11.65□□□□□ -0.54
NEDD4-212ENST00000557845 IBA57Q5T440 356 aaKnown RBP11.65□□□□□ -0.54
NEDD4-212ENST00000557845 ARL6IP6Q8N6S5 226 aa11.65□□□□□ -0.54
NEDD4-212ENST00000557845 CMTM2Q8TAZ6 248 aa11.65□□□□□ -0.54
NEDD4-212ENST00000557845 C18orf15Q96N68 181 aa11.65□□□□□ -0.54
NEDD4-212ENST00000557845 TMPRSS5Q9H3S3 457 aa11.65□□□□□ -0.54
NEDD4-212ENST00000557845 TRGV2A0A075B6R0 118 aa11.64□□□□□ -0.55
NEDD4-212ENST00000557845 TRGV1A0A0A0MS02 117 aa11.64□□□□□ -0.55
NEDD4-212ENST00000557845 CDC34P49427 236 aaPredicted RBP11.64□□□□□ -0.55
NEDD4-212ENST00000557845 SERF2P84101 59 aa11.64□□□□□ -0.55
NEDD4-212ENST00000557845 ZNRF2Q8NHG8 242 aa11.64□□□□□ -0.55
NEDD4-212ENST00000557845 TMED6Q8WW62 240 aa11.64□□□□□ -0.55
NEDD4-212ENST00000557845 LINC00588Q9Y4M8 146 aa11.64□□□□□ -0.55
NEDD4-212ENST00000557845 PRSS29PA6NIE9 313 aa11.63□□□□□ -0.55
NEDD4-212ENST00000557845 H3BNG1 76 aa11.63□□□□□ -0.55
NEDD4-212ENST00000557845 STAG3L2P0CL84 134 aa11.63□□□□□ -0.55
NEDD4-212ENST00000557845 STAG3L3P0CL85 134 aa11.63□□□□□ -0.55
NEDD4-212ENST00000557845 INO80EQ8NBZ0 244 aaPredicted RBP11.63□□□□□ -0.55
NEDD4-212ENST00000557845 RAB24Q969Q5 203 aa11.63□□□□□ -0.55
NEDD4-212ENST00000557845 ARPC5LQ9BPX5 153 aa11.63□□□□□ -0.55
NEDD4-212ENST00000557845 RPH3ALQ9UNE2 315 aa11.63□□□□□ -0.55
NEDD4-212ENST00000557845 FAT2Q9NYQ8 4349 aa11.63□□□□□ -0.55
NEDD4-212ENST00000557845 MBP02144 154 aa11.62□□□□□ -0.55
NEDD4-212ENST00000557845 ARL14EPLP0DKL9 152 aa11.62□□□□□ -0.55
NEDD4-212ENST00000557845 RGS21Q2M5E4 152 aa11.62□□□□□ -0.55
NEDD4-212ENST00000557845 MUC21Q5SSG8 566 aa11.62□□□□□ -0.55
NEDD4-212ENST00000557845 Q6AWC8 147 aa11.62□□□□□ -0.55
NEDD4-212ENST00000557845 SSX7Q7RTT5 188 aa11.62□□□□□ -0.55
NEDD4-212ENST00000557845 A0A1B0GVY2 172 aa11.61□□□□□ -0.55
NEDD4-212ENST00000557845 RNF222A6NCQ9 220 aa11.61□□□□□ -0.55
NEDD4-212ENST00000557845 GOLT1AQ6ZVE7 132 aa11.61□□□□□ -0.55
NEDD4-212ENST00000557845 OR2T35Q8NGX2 323 aa11.61□□□□□ -0.55
NEDD4-212ENST00000557845 SUN5Q8TC36 379 aa11.61□□□□□ -0.55
NEDD4-212ENST00000557845 SH3BGRL3Q9H299 93 aa11.61□□□□□ -0.55
NEDD4-212ENST00000557845 TNFSF18Q9UNG2 199 aa11.61□□□□□ -0.55
NEDD4-212ENST00000557845 FXYD6-FXYD2A0A087WZ82 144 aa11.6□□□□□ -0.55
NEDD4-212ENST00000557845 GCHFRP30047 84 aa11.6□□□□□ -0.55
NEDD4-212ENST00000557845 ZNF415Q09FC8 603 aa11.6□□□□□ -0.55
NEDD4-212ENST00000557845 SOHLH1Q5JUK2 328 aa11.6□□□□□ -0.55
NEDD4-212ENST00000557845 C1orf134Q5TEV5 83 aa11.6□□□□□ -0.55
NEDD4-212ENST00000557845 RPL7L1Q6DKI1 246 aaKnown RBP11.6□□□□□ -0.55
NEDD4-212ENST00000557845 FAM159AQ6UWV7 190 aa11.6□□□□□ -0.55
NEDD4-212ENST00000557845 VSIG2Q96IQ7 327 aa11.6□□□□□ -0.55
NEDD4-212ENST00000557845 ST6GAL2Q96JF0 529 aa11.6□□□□□ -0.55
NEDD4-212ENST00000557845 ACTR3CQ9C0K3 210 aaPredicted RBP11.6□□□□□ -0.55
NEDD4-212ENST00000557845 MRPL16Q9NX20 251 aaKnown RBP11.6□□□□□ -0.55
NEDD4-212ENST00000557845 MDFICQ9P1T7 246 aa11.6□□□□□ -0.55
NEDD4-212ENST00000557845 HECTD4Q9Y4D8 3996 aa11.6□□□□□ -0.55
NEDD4-212ENST00000557845 TRAV8-1A0A0A6YYK1 113 aa11.59□□□□□ -0.55
NEDD4-212ENST00000557845 BORCS7-ASMTA0A0B4J1R7 106 aa11.59□□□□□ -0.55
NEDD4-212ENST00000557845 NBDYA0A0U1RRE5 68 aa11.59□□□□□ -0.55
NEDD4-212ENST00000557845 GNG5P63218 68 aa11.59□□□□□ -0.55
NEDD4-212ENST00000557845 ESRGQ1W209 222 aa11.59□□□□□ -0.55
NEDD4-212ENST00000557845 TVP23CQ96ET8 276 aa11.59□□□□□ -0.55
NEDD4-212ENST00000557845 CXorf1O96002 111 aa11.58□□□□□ -0.56
NEDD4-212ENST00000557845 TMEM183BQ1AE95 376 aa11.58□□□□□ -0.56
NEDD4-212ENST00000557845 TMEM183AQ8IXX5 376 aa11.58□□□□□ -0.56
NEDD4-212ENST00000557845 Q9H8V8 135 aa11.58□□□□□ -0.56
NEDD4-212ENST00000557845 TREM1Q9NP99 234 aa11.58□□□□□ -0.56
NEDD4-212ENST00000557845 A0A096LPF7 62 aa11.57□□□□□ -0.56
NEDD4-212ENST00000557845 SERTM2A0A1B0GWG4 89 aa11.57□□□□□ -0.56
NEDD4-212ENST00000557845 G3V3Q6 166 aa11.57□□□□□ -0.56
NEDD4-212ENST00000557845 IGHV3-53P01767 116 aa11.57□□□□□ -0.56
NEDD4-212ENST00000557845 TDRG1Q3Y452 100 aa11.57□□□□□ -0.56
NEDD4-212ENST00000557845 C5orf17Q8NAS9 161 aa11.57□□□□□ -0.56
NEDD4-212ENST00000557845 SGK494Q96LW2 274 aa11.57□□□□□ -0.56
NEDD4-212ENST00000557845 TMEM167BQ9NRX6 74 aa11.57□□□□□ -0.56
NEDD4-212ENST00000557845 MUC4Q99102 2169 aa11.57□□□□□ -0.56
NEDD4-212ENST00000557845 TRGV11A0A075B6L2 103 aa11.56□□□□□ -0.56
NEDD4-212ENST00000557845 TRAV21A0A0B4J279 112 aa11.56□□□□□ -0.56
NEDD4-212ENST00000557845 GNRH2O43555 120 aa11.56□□□□□ -0.56
NEDD4-212ENST00000557845 TCRAP04437 139 aa11.56□□□□□ -0.56
NEDD4-212ENST00000557845 SUMO1P63165 101 aaKnown RBP11.56□□□□□ -0.56
NEDD4-212ENST00000557845 RASL10AQ92737 203 aa11.56□□□□□ -0.56
NEDD4-212ENST00000557845 SPXQ9BT56 116 aa11.56□□□□□ -0.56
NEDD4-212ENST00000557845 NAGKQ9UJ70 344 aa11.56□□□□□ -0.56
NEDD4-212ENST00000557845 PKD1P98161 4303 aa11.55□□□□□ -0.56
NEDD4-212ENST00000557845 F6UZH7 168 aa11.55□□□□□ -0.56
NEDD4-212ENST00000557845 PAX4O43316 350 aa11.55□□□□□ -0.56
NEDD4-212ENST00000557845 SLAQ13239 276 aa11.55□□□□□ -0.56
NEDD4-212ENST00000557845 FHL2Q14192 279 aa11.55□□□□□ -0.56
NEDD4-212ENST00000557845 UPK3BQ9BT76 320 aa11.55□□□□□ -0.56
NEDD4-212ENST00000557845 PRO0255Q9UI72 69 aa11.55□□□□□ -0.56
NEDD4-212ENST00000557845 EPDR1Q9UM22 224 aa11.55□□□□□ -0.56
NEDD4-212ENST00000557845 HHLA3Q9XRX5 114 aa11.55□□□□□ -0.56
NEDD4-212ENST00000557845 K7EQM0 130 aa11.54□□□□□ -0.56
NEDD4-212ENST00000557845 TAAR5O14804 337 aa11.54□□□□□ -0.56
NEDD4-212ENST00000557845 ARPC5O15511 151 aa11.54□□□□□ -0.56
NEDD4-212ENST00000557845 CRYBA4P53673 196 aa11.54□□□□□ -0.56
NEDD4-212ENST00000557845 ZNF726P1Q15940 193 aa11.54□□□□□ -0.56
NEDD4-212ENST00000557845 C6orf223Q8N319 242 aa11.54□□□□□ -0.56
NEDD4-212ENST00000557845 NDFIP1Q9BT67 221 aa11.54□□□□□ -0.56
NEDD4-212ENST00000557845 PSG8Q9UQ74 426 aa11.54□□□□□ -0.56
NEDD4-212ENST00000557845 MRPS16Q9Y3D3 137 aaKnown RBP11.54□□□□□ -0.56
NEDD4-212ENST00000557845 IGHV3-16A0A0C4DH30 117 aa11.53□□□□□ -0.56
NEDD4-212ENST00000557845 A0A1W2PRE2 83 aa11.53□□□□□ -0.56
NEDD4-212ENST00000557845 GGTLC3B5MD39 225 aa11.53□□□□□ -0.56
NEDD4-212ENST00000557845 IGLV2-11P01706 119 aa11.53□□□□□ -0.56
NEDD4-212ENST00000557845 IQCF2Q8IXL9 164 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms