RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 RPL31P62899 125 aaKnown RBP2.83□□□□□ -1.96
PRPF39-212ENST00000557477 FMODQ06828 376 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 FOXF1Q12946 379 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 MSMO1Q15800 293 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 C4orf26Q17RF5 130 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 TTC32Q5I0X7 151 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 Q6AWC8 147 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 SFXN4Q6P4A7 337 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 ZNF880Q6PDB4 577 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 TMEM86BQ8N661 226 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 ZNF615Q8N8J6 731 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 OR8S1Q8NH09 359 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 OR10AG1Q8NH19 301 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 ATP6V0E2Q8NHE4 81 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 VSTM2AQ8TAG5 236 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 LRRC29Q8WV35 223 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 DDIT4LQ96D03 193 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 S100A16Q96FQ6 103 aaKnown RBP2.83□□□□□ -1.96
PRPF39-212ENST00000557477 LINC00477Q96M19 166 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 GPR21Q99679 349 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 PMCHL2Q9BQD1 86 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 RTBDNQ9BSG5 229 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-212ENST00000557477 TSSK6Q9BXA6 273 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 MRPL32Q9BYC8 188 aaKnown RBP2.83□□□□□ -1.96
PRPF39-212ENST00000557477 PARP12Q9H0J9 701 aaKnown RBP2.83□□□□□ -1.96
PRPF39-212ENST00000557477 MS4A6AQ9H2W1 248 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 ABRACLQ9P1F3 81 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 TP53TG1Q9Y2A0 90 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 INSIG2Q9Y5U4 225 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 LINC00312Q9Y6C7 94 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 DNHD1Q96M86 4753 aa2.83□□□□□ -1.96
PRPF39-212ENST00000557477 CHD3Q12873 2000 aaKnown RBP2.83□□□□□ -1.96
PRPF39-212ENST00000557477 CNTRLQ7Z7A1 2325 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 HIVEP2P31629 2446 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 JMJD1CQ15652 2540 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 MUC21A0A0G2JKD1 596 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 MUC21A0A140T8X8 626 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 TMEM262E9PQX1 116 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 C17orf112F2Z3M2 114 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 PLPP1O14494 284 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 NPFFO15130 113 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 EPPINO95925 133 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 MT-ATP8P03928 68 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 GPX1P07203 203 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 PFN1P07737 140 aaKnown RBP2.82□□□□□ -1.96
PRPF39-212ENST00000557477 SRP19P09132 144 aaKnown RBP2.82□□□□□ -1.96
PRPF39-212ENST00000557477 TACSTD2P09758 323 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 LINC00869P0C866 280 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 FABP2P12104 132 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 ZNF32P17041 273 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 CNTFRP26992 372 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 SSR2P43308 183 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 GZMMP51124 257 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 Q0VG73 95 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 NNATQ16517 81 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 FBXL19-AS1Q494R0 122 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 MPV17L2Q567V2 206 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 ZNF695Q8IW36 515 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 SIGLECL1Q8N7X8 197 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 TMEM229BQ8NBD8 167 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 APCDD1LQ8NCL9 501 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 MORN4Q8NDC4 146 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 OR4C16Q8NGL9 310 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 PPP1R1CQ8WVI7 109 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 TMEM230Q96A57 120 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 GNPNAT1Q96EK6 184 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-212ENST00000557477 AQP10Q96PS8 301 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 SPANXDQ9BXN6 97 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 SH3BGRL3Q9H299 93 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 ACER3Q9NUN7 267 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 OR5V1Q9UGF6 321 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 ZNF257Q9Y2Q1 563 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 YTHDF2Q9Y5A9 579 aaKnown RBP2.82□□□□□ -1.96
PRPF39-212ENST00000557477 ACANP16112 2415 aa2.82□□□□□ -1.96
PRPF39-212ENST00000557477 SNRNP200O75643 2136 aaKnown RBP2.81□□□□□ -1.96
PRPF39-212ENST00000557477 CSPG4Q6UVK1 2322 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 IGKV3D-11A0A0A0MRZ8 115 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 LOC107984640A0A0U1RRK4 108 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 A0A1W2PPM0 123 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 RBFOX3A6NFN3 312 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 ISLRO14498 428 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 SOCS1O15524 211 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 CA2P00918 260 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 SCTP09683 121 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 IGHV1-8P0DP01 117 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 CRYGSP22914 178 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 PPICP45877 212 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 REG1BP48304 166 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 KRTDAPP60985 99 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 PPP1CBP62140 327 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 PRR3P79522 188 aaKnown RBP2.81□□□□□ -1.96
PRPF39-212ENST00000557477 ATP5G2Q06055 141 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 DIAPH2-AS1Q14236 149 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 HES1Q14469 280 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 SLC25A34Q6PIV7 304 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 C10orf111Q8N326 155 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 C3orf56Q8N813 242 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 GATD1Q8NB37 220 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 OR1L1Q8NH94 360 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 NT5CQ8TCD5 201 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms