RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 K7EQM0 130 aa9.85□□□□□ -0.83
VPS33B-206ENST00000557358 P0DMU3 169 aa9.85□□□□□ -0.83
VPS33B-206ENST00000557358 FAM231AP0DMU4 169 aa9.85□□□□□ -0.83
VPS33B-206ENST00000557358 FAM231CP0DMU5 169 aa9.85□□□□□ -0.83
VPS33B-206ENST00000557358 CRISP2P16562 243 aa9.85□□□□□ -0.83
VPS33B-206ENST00000557358 GCHFRP30047 84 aa9.85□□□□□ -0.83
VPS33B-206ENST00000557358 RNASE4P34096 147 aaKnown RBP9.85□□□□□ -0.83
VPS33B-206ENST00000557358 CLLU1Q5K131 121 aa9.85□□□□□ -0.83
VPS33B-206ENST00000557358 ARL6IP6Q8N6S5 226 aa9.85□□□□□ -0.83
VPS33B-206ENST00000557358 TMEM167BQ9NRX6 74 aa9.85□□□□□ -0.83
VPS33B-206ENST00000557358 ZNF492Q9P255 531 aa9.85□□□□□ -0.83
VPS33B-206ENST00000557358 APLNQ9ULZ1 77 aa9.85□□□□□ -0.83
VPS33B-206ENST00000557358 LYSTQ99698 3801 aa9.84□□□□□ -0.83
VPS33B-206ENST00000557358 CBY3A6NI87 242 aa9.84□□□□□ -0.83
VPS33B-206ENST00000557358 KLLNB2CW77 178 aa9.84□□□□□ -0.83
VPS33B-206ENST00000557358 ATP5G1P05496 136 aa9.84□□□□□ -0.83
VPS33B-206ENST00000557358 AZU1P20160 251 aa9.84□□□□□ -0.83
VPS33B-206ENST00000557358 ATP5G3P48201 142 aa9.84□□□□□ -0.83
VPS33B-206ENST00000557358 RNASE8Q8TDE3 154 aaKnown RBP9.84□□□□□ -0.83
VPS33B-206ENST00000557358 VGLL1Q99990 258 aa9.84□□□□□ -0.83
VPS33B-206ENST00000557358 TMPRSS5Q9H3S3 457 aa9.84□□□□□ -0.83
VPS33B-206ENST00000557358 NOP10Q9NPE3 64 aaKnown RBP9.84□□□□□ -0.83
VPS33B-206ENST00000557358 RPH3ALQ9UNE2 315 aa9.84□□□□□ -0.83
VPS33B-206ENST00000557358 LENEPQ9Y5L5 61 aa9.84□□□□□ -0.83
VPS33B-206ENST00000557358 SERTM2A0A1B0GWG4 89 aa9.83□□□□□ -0.84
VPS33B-206ENST00000557358 DIRC3C9JPN6 131 aa9.83□□□□□ -0.84
VPS33B-206ENST00000557358 PRM2P04554 102 aa9.83□□□□□ -0.84
VPS33B-206ENST00000557358 PPT1P50897 306 aa9.83□□□□□ -0.84
VPS33B-206ENST00000557358 KIR3DS1Q14943 382 aa9.83□□□□□ -0.84
VPS33B-206ENST00000557358 EIF4E3Q8N5X7 224 aaKnown RBP9.83□□□□□ -0.84
VPS33B-206ENST00000557358 C15orf53Q8NAA6 179 aa9.83□□□□□ -0.84
VPS33B-206ENST00000557358 LYPD6BQ8NI32 183 aa9.83□□□□□ -0.84
VPS33B-206ENST00000557358 NDFIP1Q9BT67 221 aa9.83□□□□□ -0.84
VPS33B-206ENST00000557358 RYR3Q15413 4870 aa9.83□□□□□ -0.84
VPS33B-206ENST00000557358 F5H768 121 aa9.82□□□□□ -0.84
VPS33B-206ENST00000557358 IFNA1P01562 189 aa9.82□□□□□ -0.84
VPS33B-206ENST00000557358 BTN1A1Q13410 526 aa9.82□□□□□ -0.84
VPS33B-206ENST00000557358 UBE2DNLQ8IWF7 75 aa9.82□□□□□ -0.84
VPS33B-206ENST00000557358 SUN5Q8TC36 379 aa9.82□□□□□ -0.84
VPS33B-206ENST00000557358 FAM19A4Q96LR4 140 aa9.82□□□□□ -0.84
VPS33B-206ENST00000557358 MANBALQ9NQG1 85 aa9.82□□□□□ -0.84
VPS33B-206ENST00000557358 SACSQ9NZJ4 4579 aa9.82□□□□□ -0.84
VPS33B-206ENST00000557358 CCL20P78556 96 aa9.81□□□□□ -0.84
VPS33B-206ENST00000557358 GOLT1AQ6ZVE7 132 aa9.81□□□□□ -0.84
VPS33B-206ENST00000557358 C5orf17Q8NAS9 161 aa9.81□□□□□ -0.84
VPS33B-206ENST00000557358 LINC00467Q9BRT7 94 aa9.81□□□□□ -0.84
VPS33B-206ENST00000557358 ARL2-SNX15V9GYD0 113 aa9.81□□□□□ -0.84
VPS33B-206ENST00000557358 ALMS1Q8TCU4 4167 aa9.81□□□□□ -0.84
VPS33B-206ENST00000557358 PLECQ15149 4684 aaKnown RBP9.8□□□□□ -0.84
VPS33B-206ENST00000557358 UBE2G2P60604 165 aa9.8□□□□□ -0.84
VPS33B-206ENST00000557358 ANXA2RQ3ZCQ2 193 aa9.8□□□□□ -0.84
VPS33B-206ENST00000557358 ZFAND2AQ8N6M9 145 aa9.8□□□□□ -0.84
VPS33B-206ENST00000557358 Q8TAT8 98 aa9.8□□□□□ -0.84
VPS33B-206ENST00000557358 GNG13Q9P2W3 67 aa9.8□□□□□ -0.84
VPS33B-206ENST00000557358 RYR2Q92736 4967 aa9.79□□□□□ -0.84
VPS33B-206ENST00000557358 TRGV2A0A075B6R0 118 aa9.79□□□□□ -0.84
VPS33B-206ENST00000557358 IGHV1OR15-1A0A075B7D0 117 aa9.79□□□□□ -0.84
VPS33B-206ENST00000557358 PLAC8L1A1L4L8 177 aa9.79□□□□□ -0.84
VPS33B-206ENST00000557358 FBLL1A6NHQ2 334 aaKnown RBP9.79□□□□□ -0.84
VPS33B-206ENST00000557358 ZNF324O75467 553 aaPredicted RBP9.79□□□□□ -0.84
VPS33B-206ENST00000557358 TAGLN2P37802 199 aaKnown RBP9.79□□□□□ -0.84
VPS33B-206ENST00000557358 DAZ2Q13117 558 aaKnown RBP9.79□□□□□ -0.84
VPS33B-206ENST00000557358 TMEM88Q6PEY1 159 aa9.79□□□□□ -0.84
VPS33B-206ENST00000557358 FAM159AQ6UWV7 190 aa9.79□□□□□ -0.84
VPS33B-206ENST00000557358 NKX6-2Q9C056 277 aaPredicted RBP9.79□□□□□ -0.84
VPS33B-206ENST00000557358 A0A1W2PRE2 83 aa9.78□□□□□ -0.84
VPS33B-206ENST00000557358 GAGE12BA1L429 117 aa9.78□□□□□ -0.84
VPS33B-206ENST00000557358 FAM74A7A6NL05 159 aa9.78□□□□□ -0.84
VPS33B-206ENST00000557358 PAGE4O60829 102 aa9.78□□□□□ -0.84
VPS33B-206ENST00000557358 GAGE7O76087 117 aa9.78□□□□□ -0.84
VPS33B-206ENST00000557358 GAGE12FP0CL80 117 aa9.78□□□□□ -0.84
VPS33B-206ENST00000557358 GAGE12GP0CL81 117 aa9.78□□□□□ -0.84
VPS33B-206ENST00000557358 GAGE12IP0CL82 117 aa9.78□□□□□ -0.84
VPS33B-206ENST00000557358 BCL2P10415 239 aa9.78□□□□□ -0.84
VPS33B-206ENST00000557358 ZNF415Q09FC8 603 aa9.78□□□□□ -0.84
VPS33B-206ENST00000557358 IBA57Q5T440 356 aaKnown RBP9.78□□□□□ -0.84
VPS33B-206ENST00000557358 POM121L12Q8N7R1 296 aa9.78□□□□□ -0.84
VPS33B-206ENST00000557358 FAM210AQ96ND0 272 aa9.78□□□□□ -0.84
VPS33B-206ENST00000557358 ATG101Q9BSB4 218 aa9.78□□□□□ -0.84
VPS33B-206ENST00000557358 TREM1Q9NP99 234 aa9.78□□□□□ -0.84
VPS33B-206ENST00000557358 TRGV11A0A075B6L2 103 aa9.77□□□□□ -0.85
VPS33B-206ENST00000557358 TRGV1A0A0A0MS02 117 aa9.77□□□□□ -0.85
VPS33B-206ENST00000557358 TRAV21A0A0B4J279 112 aa9.77□□□□□ -0.85
VPS33B-206ENST00000557358 SUMO1P63165 101 aaKnown RBP9.77□□□□□ -0.85
VPS33B-206ENST00000557358 OR5I1Q13606 314 aa9.77□□□□□ -0.85
VPS33B-206ENST00000557358 TOR2AQ5JU69 321 aa9.77□□□□□ -0.85
VPS33B-206ENST00000557358 CST9LP1Q5W188 147 aa9.77□□□□□ -0.85
VPS33B-206ENST00000557358 GSN-AS1Q9NRJ2 163 aa9.77□□□□□ -0.85
VPS33B-206ENST00000557358 RBFOX3A6NFN3 312 aa9.76□□□□□ -0.85
VPS33B-206ENST00000557358 GGTLC3B5MD39 225 aa9.76□□□□□ -0.85
VPS33B-206ENST00000557358 NUDT3O95989 172 aa9.76□□□□□ -0.85
VPS33B-206ENST00000557358 TCRAP04437 139 aa9.76□□□□□ -0.85
VPS33B-206ENST00000557358 TCL1AP56279 114 aa9.76□□□□□ -0.85
VPS33B-206ENST00000557358 ZNF506Q5JVG8 444 aa9.76□□□□□ -0.85
VPS33B-206ENST00000557358 Q6AWC8 147 aa9.76□□□□□ -0.85
VPS33B-206ENST00000557358 TXNDC17Q9BRA2 123 aa9.76□□□□□ -0.85
VPS33B-206ENST00000557358 MED9Q9NWA0 146 aa9.76□□□□□ -0.85
VPS33B-206ENST00000557358 NAGKQ9UJ70 344 aa9.76□□□□□ -0.85
VPS33B-206ENST00000557358 F6UZH7 168 aa9.75□□□□□ -0.85
VPS33B-206ENST00000557358 GNG5P63218 68 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms