RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 RBAKDNA6NC62 111 aa11.56□□□□□ -0.56
VSX1-207ENST00000557285 LGALS9BQ3B8N2 356 aa11.56□□□□□ -0.56
VSX1-207ENST00000557285 ANXA2RQ3ZCQ2 193 aa11.56□□□□□ -0.56
VSX1-207ENST00000557285 FAM74A1Q5RGS3 127 aa11.56□□□□□ -0.56
VSX1-207ENST00000557285 OR2T35Q8NGX2 323 aa11.56□□□□□ -0.56
VSX1-207ENST00000557285 LINC00467Q9BRT7 94 aa11.56□□□□□ -0.56
VSX1-207ENST00000557285 MRPL16Q9NX20 251 aaKnown RBP11.56□□□□□ -0.56
VSX1-207ENST00000557285 NAGKQ9UJ70 344 aa11.56□□□□□ -0.56
VSX1-207ENST00000557285 RTL8CO15255 209 aa11.55□□□□□ -0.56
VSX1-207ENST00000557285 IGHV3-53P01767 116 aa11.55□□□□□ -0.56
VSX1-207ENST00000557285 CCL18P55774 89 aa11.55□□□□□ -0.56
VSX1-207ENST00000557285 TCL1AP56279 114 aa11.55□□□□□ -0.56
VSX1-207ENST00000557285 LINC00336Q6ZUF6 198 aa11.55□□□□□ -0.56
VSX1-207ENST00000557285 IQCF2Q8IXL9 164 aa11.55□□□□□ -0.56
VSX1-207ENST00000557285 RAB24Q969Q5 203 aa11.55□□□□□ -0.56
VSX1-207ENST00000557285 FAT2Q9NYQ8 4349 aa11.55□□□□□ -0.56
VSX1-207ENST00000557285 TRAV8-1A0A0A6YYK1 113 aa11.54□□□□□ -0.56
VSX1-207ENST00000557285 PRSS29PA6NIE9 313 aa11.54□□□□□ -0.56
VSX1-207ENST00000557285 F6UZH7 168 aa11.54□□□□□ -0.56
VSX1-207ENST00000557285 RPL7L1Q6DKI1 246 aaKnown RBP11.54□□□□□ -0.56
VSX1-207ENST00000557285 SSX7Q7RTT5 188 aa11.54□□□□□ -0.56
VSX1-207ENST00000557285 OR2G3Q8NGZ4 309 aa11.54□□□□□ -0.56
VSX1-207ENST00000557285 SGK494Q96LW2 274 aa11.54□□□□□ -0.56
VSX1-207ENST00000557285 PSMG3Q9BT73 122 aaPredicted RBP11.54□□□□□ -0.56
VSX1-207ENST00000557285 LINC00588Q9Y4M8 146 aa11.54□□□□□ -0.56
VSX1-207ENST00000557285 BORCS7-ASMTA0A0B4J1R7 106 aa11.53□□□□□ -0.56
VSX1-207ENST00000557285 RNF222A6NCQ9 220 aa11.53□□□□□ -0.56
VSX1-207ENST00000557285 SPINK4O60575 86 aa11.53□□□□□ -0.56
VSX1-207ENST00000557285 GCHFRP30047 84 aa11.53□□□□□ -0.56
VSX1-207ENST00000557285 ZNF415Q09FC8 603 aa11.53□□□□□ -0.56
VSX1-207ENST00000557285 TMEM183BQ1AE95 376 aa11.53□□□□□ -0.56
VSX1-207ENST00000557285 IBA57Q5T440 356 aaKnown RBP11.53□□□□□ -0.56
VSX1-207ENST00000557285 Q6ZR54 194 aa11.53□□□□□ -0.56
VSX1-207ENST00000557285 TMEM183AQ8IXX5 376 aa11.53□□□□□ -0.56
VSX1-207ENST00000557285 ASB13Q8WXK3 278 aa11.53□□□□□ -0.56
VSX1-207ENST00000557285 TRBV7-9A0A0J9YWB2 115 aa11.52□□□□□ -0.57
VSX1-207ENST00000557285 MBP02144 154 aa11.52□□□□□ -0.57
VSX1-207ENST00000557285 STAG3L2P0CL84 134 aa11.52□□□□□ -0.57
VSX1-207ENST00000557285 STAG3L3P0CL85 134 aa11.52□□□□□ -0.57
VSX1-207ENST00000557285 FAM3BP58499 235 aaPredicted RBP11.52□□□□□ -0.57
VSX1-207ENST00000557285 ZNRF2Q8NHG8 242 aa11.52□□□□□ -0.57
VSX1-207ENST00000557285 MDFICQ9P1T7 246 aa11.52□□□□□ -0.57
VSX1-207ENST00000557285 TNFSF18Q9UNG2 199 aa11.52□□□□□ -0.57
VSX1-207ENST00000557285 SMLR1H3BR10 107 aa11.51□□□□□ -0.57
VSX1-207ENST00000557285 C1orf134Q5TEV5 83 aa11.51□□□□□ -0.57
VSX1-207ENST00000557285 FAM159AQ6UWV7 190 aa11.51□□□□□ -0.57
VSX1-207ENST00000557285 ACTR3CQ9C0K3 210 aaPredicted RBP11.51□□□□□ -0.57
VSX1-207ENST00000557285 TREM1Q9NP99 234 aa11.51□□□□□ -0.57
VSX1-207ENST00000557285 MUC4Q99102 2169 aa11.51□□□□□ -0.57
VSX1-207ENST00000557285 DNAH17Q9UFH2 4485 aa11.5□□□□□ -0.57
VSX1-207ENST00000557285 ARPC5O15511 151 aa11.5□□□□□ -0.57
VSX1-207ENST00000557285 CXorf1O96002 111 aa11.5□□□□□ -0.57
VSX1-207ENST00000557285 SERF2P84101 59 aa11.5□□□□□ -0.57
VSX1-207ENST00000557285 SOHLH1Q5JUK2 328 aa11.5□□□□□ -0.57
VSX1-207ENST00000557285 Q6AWC8 147 aa11.5□□□□□ -0.57
VSX1-207ENST00000557285 TVP23CQ96ET8 276 aa11.5□□□□□ -0.57
VSX1-207ENST00000557285 LENEPQ9Y5L5 61 aa11.5□□□□□ -0.57
VSX1-207ENST00000557285 TMED6Q8WW62 240 aa11.49□□□□□ -0.57
VSX1-207ENST00000557285 VSIG2Q96IQ7 327 aa11.49□□□□□ -0.57
VSX1-207ENST00000557285 ST6GAL2Q96JF0 529 aa11.49□□□□□ -0.57
VSX1-207ENST00000557285 TRGV11A0A075B6L2 103 aa11.48□□□□□ -0.57
VSX1-207ENST00000557285 NBDYA0A0U1RRE5 68 aa11.48□□□□□ -0.57
VSX1-207ENST00000557285 G3V3Q6 166 aa11.48□□□□□ -0.57
VSX1-207ENST00000557285 PAX4O43316 350 aa11.48□□□□□ -0.57
VSX1-207ENST00000557285 SUMO1P63165 101 aaKnown RBP11.48□□□□□ -0.57
VSX1-207ENST00000557285 ESRGQ1W209 222 aa11.48□□□□□ -0.57
VSX1-207ENST00000557285 C5orf17Q8NAS9 161 aa11.48□□□□□ -0.57
VSX1-207ENST00000557285 PKHD1P08F94 4074 aa11.48□□□□□ -0.57
VSX1-207ENST00000557285 TRAV21A0A0B4J279 112 aa11.47□□□□□ -0.57
VSX1-207ENST00000557285 GGTLC3B5MD39 225 aa11.47□□□□□ -0.57
VSX1-207ENST00000557285 GNRH2O43555 120 aa11.47□□□□□ -0.57
VSX1-207ENST00000557285 TCRAP04437 139 aa11.47□□□□□ -0.57
VSX1-207ENST00000557285 SFTA3P0C7M3 94 aa11.47□□□□□ -0.57
VSX1-207ENST00000557285 FGF8P55075 233 aaPredicted RBP11.47□□□□□ -0.57
VSX1-207ENST00000557285 UBE2G2P60604 165 aa11.47□□□□□ -0.57
VSX1-207ENST00000557285 AKR1C8PQ5T2L2 129 aa11.47□□□□□ -0.57
VSX1-207ENST00000557285 C18orf15Q96N68 181 aa11.47□□□□□ -0.57
VSX1-207ENST00000557285 C8orf49Q96NF6 230 aa11.47□□□□□ -0.57
VSX1-207ENST00000557285 NDFIP1Q9BT67 221 aa11.47□□□□□ -0.57
VSX1-207ENST00000557285 TMEM167BQ9NRX6 74 aa11.47□□□□□ -0.57
VSX1-207ENST00000557285 A0A096LPF7 62 aa11.46□□□□□ -0.57
VSX1-207ENST00000557285 TRGV4A0A0C4DH28 118 aa11.46□□□□□ -0.57
VSX1-207ENST00000557285 A0A1B0GVY2 172 aa11.46□□□□□ -0.57
VSX1-207ENST00000557285 H3BNG1 76 aa11.46□□□□□ -0.57
VSX1-207ENST00000557285 K7EQM0 130 aa11.46□□□□□ -0.57
VSX1-207ENST00000557285 ZNF726P1Q15940 193 aa11.46□□□□□ -0.57
VSX1-207ENST00000557285 PRNTQ86SH4 94 aa11.46□□□□□ -0.57
VSX1-207ENST00000557285 Q9H8V8 135 aa11.46□□□□□ -0.57
VSX1-207ENST00000557285 ARL6IP6Q8N6S5 226 aa11.45□□□□□ -0.58
VSX1-207ENST00000557285 SUN5Q8TC36 379 aa11.45□□□□□ -0.58
VSX1-207ENST00000557285 SDF2L1Q9HCN8 221 aa11.45□□□□□ -0.58
VSX1-207ENST00000557285 EPDR1Q9UM22 224 aa11.45□□□□□ -0.58
VSX1-207ENST00000557285 PSG8Q9UQ74 426 aa11.45□□□□□ -0.58
VSX1-207ENST00000557285 ICOSQ9Y6W8 199 aa11.45□□□□□ -0.58
VSX1-207ENST00000557285 IGHV3-16A0A0C4DH30 117 aa11.44□□□□□ -0.58
VSX1-207ENST00000557285 CTXND1A0A1B0GTU2 59 aa11.44□□□□□ -0.58
VSX1-207ENST00000557285 SERTM2A0A1B0GWG4 89 aa11.44□□□□□ -0.58
VSX1-207ENST00000557285 IFNA7P01567 189 aa11.44□□□□□ -0.58
VSX1-207ENST00000557285 TYMSP04818 313 aa11.44□□□□□ -0.58
VSX1-207ENST00000557285 ZNF80P51504 273 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms