RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 H3BTX0 84 aa5.89□□□□□ -1.47
VRK1-206ENST00000557222 J3KRW8 73 aa5.89□□□□□ -1.47
VRK1-206ENST00000557222 L7N2F9 121 aa5.89□□□□□ -1.47
VRK1-206ENST00000557222 SNRPCP09234 159 aaKnown RBP5.89□□□□□ -1.47
VRK1-206ENST00000557222 VAMP2P63027 116 aa5.89□□□□□ -1.47
VRK1-206ENST00000557222 VWC2Q2TAL6 325 aa5.89□□□□□ -1.47
VRK1-206ENST00000557222 TRIQKQ629K1 86 aa5.89□□□□□ -1.47
VRK1-206ENST00000557222 LYPD5Q6UWN5 251 aa5.89□□□□□ -1.47
VRK1-206ENST00000557222 IQCF2Q8IXL9 164 aa5.89□□□□□ -1.47
VRK1-206ENST00000557222 SRRQ9GZT4 340 aa5.89□□□□□ -1.47
VRK1-206ENST00000557222 UQCC1Q9NVA1 299 aa5.89□□□□□ -1.47
VRK1-206ENST00000557222 FLVCR2Q9UPI3 526 aa5.89□□□□□ -1.47
VRK1-206ENST00000557222 HHLA3Q9XRX5 114 aa5.89□□□□□ -1.47
VRK1-206ENST00000557222 KLF12Q9Y4X4 402 aa5.89□□□□□ -1.47
VRK1-206ENST00000557222 TRAV5A0A0B4J249 113 aa5.88□□□□□ -1.47
VRK1-206ENST00000557222 GPX1P07203 203 aa5.88□□□□□ -1.47
VRK1-206ENST00000557222 PRB4P10163 310 aaPredicted RBP5.88□□□□□ -1.47
VRK1-206ENST00000557222 S100A11P31949 105 aa5.88□□□□□ -1.47
VRK1-206ENST00000557222 RNASE4P34096 147 aaKnown RBP5.88□□□□□ -1.47
VRK1-206ENST00000557222 CRYBA4P53673 196 aa5.88□□□□□ -1.47
VRK1-206ENST00000557222 CD300CQ08708 224 aa5.88□□□□□ -1.47
VRK1-206ENST00000557222 ZNF846Q147U1 533 aa5.88□□□□□ -1.47
VRK1-206ENST00000557222 ATP6V1FQ16864 119 aa5.88□□□□□ -1.47
VRK1-206ENST00000557222 TOR2AQ5JU69 321 aa5.88□□□□□ -1.47
VRK1-206ENST00000557222 MIC13Q5XKP0 118 aa5.88□□□□□ -1.47
VRK1-206ENST00000557222 NEGR1Q7Z3B1 354 aa5.88□□□□□ -1.47
VRK1-206ENST00000557222 MRPL32Q9BYC8 188 aaKnown RBP5.88□□□□□ -1.47
VRK1-206ENST00000557222 AGPAT4-IT1Q9H0P7 198 aa5.88□□□□□ -1.47
VRK1-206ENST00000557222 SLC39A9Q9NUM3 307 aa5.88□□□□□ -1.47
VRK1-206ENST00000557222 TIMM9Q9Y5J7 89 aa5.88□□□□□ -1.47
VRK1-206ENST00000557222 LY96Q9Y6Y9 160 aa5.88□□□□□ -1.47
VRK1-206ENST00000557222 IGHV1OR15-1A0A075B7D0 117 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 M0R3E3 92 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 NDUFB4O95168 129 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 ORM1P02763 201 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 PVALBP20472 110 aaPredicted RBP5.87□□□□□ -1.47
VRK1-206ENST00000557222 EVI2AP22794 236 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 BCAP31P51572 246 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 HBG1P69891 147 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 HBG2P69892 147 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 ERCC8Q13216 396 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 BTN1A1Q13410 526 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 BAK1Q16611 211 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 TMEM78Q5T7P6 136 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 Q5VSD8 79 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 C10orf126Q8N4M7 172 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 ZFAND2AQ8N6M9 145 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 C11orf1Q9H5F2 150 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 AAMDCQ9H7C9 122 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 MSRB1Q9NZV6 116 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 TP53TG3Q9ULZ0 132 aa5.87□□□□□ -1.47
VRK1-206ENST00000557222 TMA7Q9Y2S6 64 aaKnown RBP5.87□□□□□ -1.47
VRK1-206ENST00000557222 PRAF2O60831 178 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 CST7O76096 145 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 DNAH10OSP0CZ25 163 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 GCSHP23434 173 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 BTCP35070 178 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 SULT1A1P50225 295 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 CAV2P51636 162 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 TIRAPP58753 221 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 KRTAP10-1P60331 282 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 SH2D6Q7Z4S9 175 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 NTN5Q8WTR8 489 aaPredicted RBP5.86□□□□□ -1.47
VRK1-206ENST00000557222 RASL10AQ92737 203 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 ARPC5LQ9BPX5 153 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 TXNDC17Q9BRA2 123 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 SPXQ9BT56 116 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 LYRM2Q9NU23 88 aaPredicted RBP5.86□□□□□ -1.47
VRK1-206ENST00000557222 ZNF492Q9P255 531 aa5.86□□□□□ -1.47
VRK1-206ENST00000557222 RBAKDNA6NC62 111 aa5.85□□□□□ -1.47
VRK1-206ENST00000557222 FAM24AA6NFZ4 105 aa5.85□□□□□ -1.47
VRK1-206ENST00000557222 K7EQD1 137 aa5.85□□□□□ -1.47
VRK1-206ENST00000557222 SRIP30626 198 aa5.85□□□□□ -1.47
VRK1-206ENST00000557222 ZNF138P52744 262 aa5.85□□□□□ -1.47
VRK1-206ENST00000557222 BAXQ07812 192 aa5.85□□□□□ -1.47
VRK1-206ENST00000557222 ZNF415Q09FC8 603 aa5.85□□□□□ -1.47
VRK1-206ENST00000557222 FOXI1Q12951 378 aa5.85□□□□□ -1.47
VRK1-206ENST00000557222 STX12Q86Y82 276 aa5.85□□□□□ -1.47
VRK1-206ENST00000557222 OR10G4Q8NGN3 311 aa5.85□□□□□ -1.47
VRK1-206ENST00000557222 PCNPQ8WW12 178 aaKnown RBP5.85□□□□□ -1.47
VRK1-206ENST00000557222 C2orf50Q96LR7 162 aa5.85□□□□□ -1.47
VRK1-206ENST00000557222 TMEM70Q9BUB7 260 aa5.85□□□□□ -1.47
VRK1-206ENST00000557222 LSM5Q9Y4Y9 91 aaKnown RBP5.85□□□□□ -1.47
VRK1-206ENST00000557222 LENEPQ9Y5L5 61 aa5.85□□□□□ -1.47
VRK1-206ENST00000557222 TNFRSF18Q9Y5U5 241 aa5.85□□□□□ -1.47
VRK1-206ENST00000557222 TRGV4A0A0C4DH28 118 aa5.84□□□□□ -1.47
VRK1-206ENST00000557222 UBE2L5PA0A1B0GUS4 154 aa5.84□□□□□ -1.47
VRK1-206ENST00000557222 IGHV3-53P01767 116 aa5.84□□□□□ -1.47
VRK1-206ENST00000557222 NBEAP1P0C6P0 100 aa5.84□□□□□ -1.47
VRK1-206ENST00000557222 FGF7P21781 194 aa5.84□□□□□ -1.47
VRK1-206ENST00000557222 BLOC1S1P78537 153 aa5.84□□□□□ -1.47
VRK1-206ENST00000557222 IL15RAQ13261 267 aa5.84□□□□□ -1.47
VRK1-206ENST00000557222 ZNF266Q14584 549 aa5.84□□□□□ -1.47
VRK1-206ENST00000557222 EXOC3-AS1Q8N2X6 119 aa5.84□□□□□ -1.47
VRK1-206ENST00000557222 TMEM252Q8N6L7 170 aa5.84□□□□□ -1.47
VRK1-206ENST00000557222 SDHCQ99643 169 aaPredicted RBP5.84□□□□□ -1.47
VRK1-206ENST00000557222 GPN1Q9HCN4 374 aaPredicted RBP5.84□□□□□ -1.47
VRK1-206ENST00000557222 MRPL16Q9NX20 251 aaKnown RBP5.84□□□□□ -1.47
VRK1-206ENST00000557222 FAM30AQ9NZY2 134 aa5.84□□□□□ -1.47
VRK1-206ENST00000557222 TRGV11A0A075B6L2 103 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms