RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 ZFAND2AQ8N6M9 145 aa8.41□□□□□ -1.06
SYNE2-226ENST00000557084 GNPNAT1Q96EK6 184 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-226ENST00000557084 ACTR3CQ9C0K3 210 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-226ENST00000557084 GSN-AS1Q9NRJ2 163 aa8.41□□□□□ -1.06
SYNE2-226ENST00000557084 IGHV1OR15-1A0A075B7D0 117 aa8.4□□□□□ -1.06
SYNE2-226ENST00000557084 TRGV1A0A0A0MS02 117 aa8.4□□□□□ -1.06
SYNE2-226ENST00000557084 M0R2N4 97 aa8.4□□□□□ -1.06
SYNE2-226ENST00000557084 ANXA2RQ3ZCQ2 193 aa8.4□□□□□ -1.06
SYNE2-226ENST00000557084 GOLT1AQ6ZVE7 132 aa8.4□□□□□ -1.06
SYNE2-226ENST00000557084 RAB24Q969Q5 203 aa8.4□□□□□ -1.06
SYNE2-226ENST00000557084 LINC00467Q9BRT7 94 aa8.4□□□□□ -1.06
SYNE2-226ENST00000557084 SH3BGRL3Q9H299 93 aa8.4□□□□□ -1.06
SYNE2-226ENST00000557084 TNFSF18Q9UNG2 199 aa8.4□□□□□ -1.06
SYNE2-226ENST00000557084 FRAS1Q86XX4 4008 aa8.39□□□□□ -1.07
SYNE2-226ENST00000557084 DNAH10Q8IVF4 4471 aa8.39□□□□□ -1.07
SYNE2-226ENST00000557084 K7EQM0 130 aa8.39□□□□□ -1.07
SYNE2-226ENST00000557084 ARPC5O15511 151 aa8.39□□□□□ -1.07
SYNE2-226ENST00000557084 CXorf1O96002 111 aa8.39□□□□□ -1.07
SYNE2-226ENST00000557084 PRR9Q5T870 116 aa8.39□□□□□ -1.07
SYNE2-226ENST00000557084 RPL7L1Q6DKI1 246 aaKnown RBP8.39□□□□□ -1.07
SYNE2-226ENST00000557084 Q6ZTI0 123 aa8.39□□□□□ -1.07
SYNE2-226ENST00000557084 LENEPQ9Y5L5 61 aa8.39□□□□□ -1.07
SYNE2-226ENST00000557084 IGLV2-18A0A075B6J9 118 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 TRAV26-1A0A087WT03 109 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 RNF222A6NCQ9 220 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 TAAR5O14804 337 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 STAG3L2P0CL84 134 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 STAG3L3P0CL85 134 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 GCHFRP30047 84 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 CCL18P55774 89 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 MUC21Q5SSG8 566 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 FAM159AQ6UWV7 190 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 ARL6IP6Q8N6S5 226 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 TMED6Q8WW62 240 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 NDFIP1Q9BT67 221 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 TMPRSS5Q9H3S3 457 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 TMEM167BQ9NRX6 74 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 NAGKQ9UJ70 344 aa8.38□□□□□ -1.07
SYNE2-226ENST00000557084 DNAH6Q9C0G6 4158 aa8.37□□□□□ -1.07
SYNE2-226ENST00000557084 A0A0J9YY99 117 aa8.37□□□□□ -1.07
SYNE2-226ENST00000557084 TCL1AP56279 114 aa8.37□□□□□ -1.07
SYNE2-226ENST00000557084 FAM3BP58499 235 aaPredicted RBP8.37□□□□□ -1.07
SYNE2-226ENST00000557084 GNG5P63218 68 aa8.37□□□□□ -1.07
SYNE2-226ENST00000557084 ZNF415Q09FC8 603 aa8.37□□□□□ -1.07
SYNE2-226ENST00000557084 AKR1C8PQ5T2L2 129 aa8.37□□□□□ -1.07
SYNE2-226ENST00000557084 IBA57Q5T440 356 aaKnown RBP8.37□□□□□ -1.07
SYNE2-226ENST00000557084 LINC00612Q8N6U2 182 aa8.37□□□□□ -1.07
SYNE2-226ENST00000557084 C11orf72Q8NBR9 251 aa8.37□□□□□ -1.07
SYNE2-226ENST00000557084 ST6GAL2Q96JF0 529 aa8.37□□□□□ -1.07
SYNE2-226ENST00000557084 TREM1Q9NP99 234 aa8.37□□□□□ -1.07
SYNE2-226ENST00000557084 TP53TG3Q9ULZ0 132 aa8.37□□□□□ -1.07
SYNE2-226ENST00000557084 KLF12Q9Y4X4 402 aa8.37□□□□□ -1.07
SYNE2-226ENST00000557084 TRGV11A0A075B6L2 103 aa8.36□□□□□ -1.07
SYNE2-226ENST00000557084 SERTM2A0A1B0GWG4 89 aa8.36□□□□□ -1.07
SYNE2-226ENST00000557084 TMEM183BQ1AE95 376 aa8.36□□□□□ -1.07
SYNE2-226ENST00000557084 SOHLH1Q5JUK2 328 aa8.36□□□□□ -1.07
SYNE2-226ENST00000557084 Q6ZQT7 251 aa8.36□□□□□ -1.07
SYNE2-226ENST00000557084 TMEM183AQ8IXX5 376 aa8.36□□□□□ -1.07
SYNE2-226ENST00000557084 C5orf17Q8NAS9 161 aa8.36□□□□□ -1.07
SYNE2-226ENST00000557084 MRPL16Q9NX20 251 aaKnown RBP8.36□□□□□ -1.07
SYNE2-226ENST00000557084 TRAV8-1A0A0A6YYK1 113 aa8.35□□□□□ -1.07
SYNE2-226ENST00000557084 SMLR1H3BR10 107 aa8.35□□□□□ -1.07
SYNE2-226ENST00000557084 SPINK4O60575 86 aa8.35□□□□□ -1.07
SYNE2-226ENST00000557084 IFNA7P01567 189 aa8.35□□□□□ -1.07
SYNE2-226ENST00000557084 HOXA5P20719 270 aa8.35□□□□□ -1.07
SYNE2-226ENST00000557084 SUMO1P63165 101 aaKnown RBP8.35□□□□□ -1.07
SYNE2-226ENST00000557084 LGALS9BQ3B8N2 356 aa8.35□□□□□ -1.07
SYNE2-226ENST00000557084 Q6AWC8 147 aa8.35□□□□□ -1.07
SYNE2-226ENST00000557084 Q6ZNX1 250 aa8.35□□□□□ -1.07
SYNE2-226ENST00000557084 LINC00336Q6ZUF6 198 aa8.35□□□□□ -1.07
SYNE2-226ENST00000557084 TRAV21A0A0B4J279 112 aa8.34□□□□□ -1.07
SYNE2-226ENST00000557084 CTXND1A0A1B0GTU2 59 aa8.34□□□□□ -1.07
SYNE2-226ENST00000557084 F6UZH7 168 aa8.34□□□□□ -1.07
SYNE2-226ENST00000557084 IGHV3-53P01767 116 aa8.34□□□□□ -1.07
SYNE2-226ENST00000557084 TCRAP04437 139 aa8.34□□□□□ -1.07
SYNE2-226ENST00000557084 ZFP69Q49AA0 526 aa8.34□□□□□ -1.07
SYNE2-226ENST00000557084 SSX7Q7RTT5 188 aa8.34□□□□□ -1.07
SYNE2-226ENST00000557084 SGK494Q96LW2 274 aa8.34□□□□□ -1.07
SYNE2-226ENST00000557084 G3V3Q6 166 aa8.33□□□□□ -1.08
SYNE2-226ENST00000557084 H3BNG1 76 aa8.33□□□□□ -1.08
SYNE2-226ENST00000557084 UBE2G2P60604 165 aa8.33□□□□□ -1.08
SYNE2-226ENST00000557084 CYB561D1Q8N8Q1 229 aa8.33□□□□□ -1.08
SYNE2-226ENST00000557084 STOML3Q8TAV4 291 aa8.33□□□□□ -1.08
SYNE2-226ENST00000557084 SUN5Q8TC36 379 aa8.33□□□□□ -1.08
SYNE2-226ENST00000557084 KCNS1Q96KK3 526 aa8.33□□□□□ -1.08
SYNE2-226ENST00000557084 C18orf15Q96N68 181 aa8.33□□□□□ -1.08
SYNE2-226ENST00000557084 SPXQ9BT56 116 aa8.33□□□□□ -1.08
SYNE2-226ENST00000557084 SDF2L1Q9HCN8 221 aa8.33□□□□□ -1.08
SYNE2-226ENST00000557084 MDFICQ9P1T7 246 aa8.33□□□□□ -1.08
SYNE2-226ENST00000557084 EPDR1Q9UM22 224 aa8.33□□□□□ -1.08
SYNE2-226ENST00000557084 A0A1W2PRE2 83 aa8.32□□□□□ -1.08
SYNE2-226ENST00000557084 FBLL1A6NHQ2 334 aaKnown RBP8.32□□□□□ -1.08
SYNE2-226ENST00000557084 GGTLC3B5MD39 225 aa8.32□□□□□ -1.08
SYNE2-226ENST00000557084 PAX4O43316 350 aa8.32□□□□□ -1.08
SYNE2-226ENST00000557084 PPT1P50897 306 aa8.32□□□□□ -1.08
SYNE2-226ENST00000557084 FGF8P55075 233 aaPredicted RBP8.32□□□□□ -1.08
SYNE2-226ENST00000557084 SLAQ13239 276 aa8.32□□□□□ -1.08
SYNE2-226ENST00000557084 PRNTQ86SH4 94 aa8.32□□□□□ -1.08
SYNE2-226ENST00000557084 NKX6-2Q9C056 277 aaPredicted RBP8.32□□□□□ -1.08
SYNE2-226ENST00000557084 PSG8Q9UQ74 426 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms