RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 FBLL1A6NHQ2 334 aaKnown RBP10.3□□□□□ -0.76
EFCAB11-212ENST00000556639 SNRPD3P62318 126 aaKnown RBP10.3□□□□□ -0.76
EFCAB11-212ENST00000556639 PAFAH1B2P68402 229 aa10.3□□□□□ -0.76
EFCAB11-212ENST00000556639 A0A1B0GUS0 222 aa10.29□□□□□ -0.76
EFCAB11-212ENST00000556639 DEFB131AP59861 70 aa10.29□□□□□ -0.76
EFCAB11-212ENST00000556639 KRTAP24-1Q3LI83 254 aa10.29□□□□□ -0.76
EFCAB11-212ENST00000556639 ZFAND2AQ8N6M9 145 aa10.29□□□□□ -0.76
EFCAB11-212ENST00000556639 PGLYRP4Q96LB8 373 aa10.29□□□□□ -0.76
EFCAB11-212ENST00000556639 LINC00477Q96M19 166 aa10.29□□□□□ -0.76
EFCAB11-212ENST00000556639 KNCNA6PVL3 124 aa10.29□□□□□ -0.76
EFCAB11-212ENST00000556639 SAP30O75446 220 aa10.29□□□□□ -0.76
EFCAB11-212ENST00000556639 BTF3L4Q96K17 158 aa10.29□□□□□ -0.76
EFCAB11-212ENST00000556639 SRD5A3Q9H8P0 318 aa10.29□□□□□ -0.76
EFCAB11-212ENST00000556639 A8MWL6 223 aa10.28□□□□□ -0.76
EFCAB11-212ENST00000556639 C1orf196B1AJZ1 125 aa10.28□□□□□ -0.76
EFCAB11-212ENST00000556639 PHOX2AO14813 284 aa10.28□□□□□ -0.76
EFCAB11-212ENST00000556639 TYMSP04818 313 aa10.28□□□□□ -0.76
EFCAB11-212ENST00000556639 PRIMA1Q86XR5 153 aa10.28□□□□□ -0.76
EFCAB11-212ENST00000556639 FAM19A4Q96LR4 140 aa10.28□□□□□ -0.76
EFCAB11-212ENST00000556639 PPP1R14DQ9NXH3 145 aa10.28□□□□□ -0.76
EFCAB11-212ENST00000556639 ZNF256Q9Y2P7 627 aaPredicted RBP10.28□□□□□ -0.76
EFCAB11-212ENST00000556639 A0A0J9YX75 114 aa10.28□□□□□ -0.76
EFCAB11-212ENST00000556639 SSTP61278 116 aa10.28□□□□□ -0.76
EFCAB11-212ENST00000556639 OR4B1Q8NGF8 309 aa10.28□□□□□ -0.76
EFCAB11-212ENST00000556639 FRZBQ92765 325 aa10.28□□□□□ -0.76
EFCAB11-212ENST00000556639 MUC21A0A0G2JKD1 596 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 MUC21A0A140T8X8 626 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 GRIFINA4D1Z8 144 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 TMEM189A5PLL7 270 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 FABP5P3A8MUU1 101 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 ORM1P02763 201 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 PF4P02776 101 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 MUC21Q5SSG8 566 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 SAMD13Q5VXD3 122 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 APRG1Q8IVJ8 170 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 CITED1Q99966 193 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 NAT8BQ9UHF3 227 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 IGKV3D-20A0A0C4DH25 116 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 FABP9Q0Z7S8 132 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 CT83Q5H943 113 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 LINC00482Q8N8I6 264 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 TPPP3Q9BW30 176 aa10.27□□□□□ -0.77
EFCAB11-212ENST00000556639 NOTCH3Q9UM47 2321 aa10.26□□□□□ -0.77
EFCAB11-212ENST00000556639 RNASE4P34096 147 aaKnown RBP10.26□□□□□ -0.77
EFCAB11-212ENST00000556639 ACTL10Q5JWF8 245 aa10.26□□□□□ -0.77
EFCAB11-212ENST00000556639 MAP6D1Q9H9H5 199 aa10.26□□□□□ -0.77
EFCAB11-212ENST00000556639 SIGLEC8Q9NYZ4 499 aa10.26□□□□□ -0.77
EFCAB11-212ENST00000556639 M0R2Z0 102 aa10.25□□□□□ -0.77
EFCAB11-212ENST00000556639 GPX1P07203 203 aa10.25□□□□□ -0.77
EFCAB11-212ENST00000556639 SAV1Q9H4B6 383 aaPredicted RBP10.25□□□□□ -0.77
EFCAB11-212ENST00000556639 TRAV12-2A0A075B6T6 113 aa10.25□□□□□ -0.77
EFCAB11-212ENST00000556639 FXYD7P58549 80 aa10.25□□□□□ -0.77
EFCAB11-212ENST00000556639 EBLN2Q6P2I7 272 aa10.25□□□□□ -0.77
EFCAB11-212ENST00000556639 TRAV9-1A0A075B6T8 112 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 TRGC1P0CF51 173 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 CAMPP49913 170 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 RAB5BP61020 215 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 ODF3L2Q3SX64 289 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 SPAG8Q99932 426 aaPredicted RBP10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 LENEPQ9Y5L5 61 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 TRAPPC1Q9Y5R8 145 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 SNURFLB1AK76 121 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 HIST1H2BKO60814 126 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 IGLV1-51P01701 117 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 HIST1H2BJP06899 126 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 HIST1H2BOP23527 126 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 HIST1H2BBP33778 126 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 HIST1H2BDP58876 126 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 HIST1H2BCP62807 126 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 HIST2H2BEQ16778 126 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 FOXI2Q6ZQN5 318 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 TMEM136Q6ZRR5 245 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 HIST1H2BHQ93079 126 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 HIST1H2BNQ99877 126 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 HIST1H2BMQ99879 126 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 NAGKQ9UJ70 344 aa10.24□□□□□ -0.77
EFCAB11-212ENST00000556639 RBMY1BA6NDE4 496 aaKnown RBP10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 RBMY1EA6NEQ0 496 aaKnown RBP10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 RBMY1DP0C7P1 496 aaKnown RBP10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 ARMS2P0C7Q2 107 aa10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 CRISP2P16562 243 aa10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 RAB4BP61018 213 aa10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 SPINK13Q1W4C9 94 aa10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 SSBP4Q9BWG4 385 aaPredicted RBP10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 GFRA4Q9GZZ7 299 aa10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 TRAV2A0A0B4J234 112 aa10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 OR4C46A6NHA9 309 aa10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 SPRY2O43597 315 aa10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 FOXA3P55318 350 aaPredicted RBP10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 LINC01559Q495D7 138 aa10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 LYZL1Q6UWQ5 148 aa10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 AMTNQ6UX39 209 aa10.23□□□□□ -0.77
EFCAB11-212ENST00000556639 TRAV25A0A0B4J276 109 aa10.22□□□□□ -0.77
EFCAB11-212ENST00000556639 KLLNB2CW77 178 aa10.22□□□□□ -0.77
EFCAB11-212ENST00000556639 KIAA1644Q3SXP7 199 aa10.22□□□□□ -0.77
EFCAB11-212ENST00000556639 MRPL18Q9H0U6 180 aaKnown RBP10.22□□□□□ -0.77
EFCAB11-212ENST00000556639 WFDC10AQ9H1F0 79 aa10.22□□□□□ -0.77
EFCAB11-212ENST00000556639 STAB1Q9NY15 2570 aa10.22□□□□□ -0.77
EFCAB11-212ENST00000556639 TRAV12-3A0A0B4J271 114 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms