RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 DLX4Q92988 240 aaPredicted RBP8.32□□□□□ -1.08
CHGA-205ENST00000556098 C16orf92Q96LL3 132 aa8.32□□□□□ -1.08
CHGA-205ENST00000556098 C17orf77Q96MU5 243 aa8.32□□□□□ -1.08
CHGA-205ENST00000556098 RHPN1-AS1Q9BWJ2 59 aa8.32□□□□□ -1.08
CHGA-205ENST00000556098 EDA2RQ9HAV5 297 aa8.32□□□□□ -1.08
CHGA-205ENST00000556098 TGIF2-C20orf24A0A0A6YYL0 155 aa8.31□□□□□ -1.08
CHGA-205ENST00000556098 TRAV2A0A0B4J234 112 aa8.31□□□□□ -1.08
CHGA-205ENST00000556098 CXCL1P09341 107 aa8.31□□□□□ -1.08
CHGA-205ENST00000556098 OR5I1Q13606 314 aa8.31□□□□□ -1.08
CHGA-205ENST00000556098 C9orf47Q6ZRZ4 202 aa8.31□□□□□ -1.08
CHGA-205ENST00000556098 PRNTQ86SH4 94 aa8.31□□□□□ -1.08
CHGA-205ENST00000556098 TSKUQ8WUA8 353 aa8.31□□□□□ -1.08
CHGA-205ENST00000556098 LINC00479Q96M42 142 aa8.31□□□□□ -1.08
CHGA-205ENST00000556098 SPATA25Q9BR10 227 aa8.31□□□□□ -1.08
CHGA-205ENST00000556098 TM2D3Q9BRN9 247 aa8.31□□□□□ -1.08
CHGA-205ENST00000556098 RPP21Q9H633 154 aaKnown RBP8.31□□□□□ -1.08
CHGA-205ENST00000556098 RETNQ9HD89 108 aa8.31□□□□□ -1.08
CHGA-205ENST00000556098 NAT8BQ9UHF3 227 aa8.31□□□□□ -1.08
CHGA-205ENST00000556098 IGHV3OR16-8A0A075B7F1 116 aa8.3□□□□□ -1.08
CHGA-205ENST00000556098 TMEM213A2RRL7 107 aa8.3□□□□□ -1.08
CHGA-205ENST00000556098 M0R3E3 92 aa8.3□□□□□ -1.08
CHGA-205ENST00000556098 SOCS3O14543 225 aa8.3□□□□□ -1.08
CHGA-205ENST00000556098 APOHP02749 345 aaPredicted RBP8.3□□□□□ -1.08
CHGA-205ENST00000556098 S100A6P06703 90 aa8.3□□□□□ -1.08
CHGA-205ENST00000556098 RPS20P60866 119 aaKnown RBP8.3□□□□□ -1.08
CHGA-205ENST00000556098 KLF5Q13887 457 aaPredicted RBP8.3□□□□□ -1.08
CHGA-205ENST00000556098 TMEM78Q5T7P6 136 aa8.3□□□□□ -1.08
CHGA-205ENST00000556098 NUDT10Q8NFP7 164 aa8.3□□□□□ -1.08
CHGA-205ENST00000556098 NUDT11Q96G61 164 aa8.3□□□□□ -1.08
CHGA-205ENST00000556098 FAM110AQ9BQ89 295 aa8.3□□□□□ -1.08
CHGA-205ENST00000556098 RNASE7Q9H1E1 156 aaKnown RBP8.3□□□□□ -1.08
CHGA-205ENST00000556098 IGHV4OR15-8A0A075B7B6 117 aa8.29□□□□□ -1.08
CHGA-205ENST00000556098 A0A087WW49 117 aa8.29□□□□□ -1.08
CHGA-205ENST00000556098 A0A1B0GW15 77 aa8.29□□□□□ -1.08
CHGA-205ENST00000556098 IZUMO1RA6ND01 250 aa8.29□□□□□ -1.08
CHGA-205ENST00000556098 ZNF207O43670 478 aaKnown RBP8.29□□□□□ -1.08
CHGA-205ENST00000556098 SNRPCP09234 159 aaKnown RBP8.29□□□□□ -1.08
CHGA-205ENST00000556098 PAFAH1B2P68402 229 aa8.29□□□□□ -1.08
CHGA-205ENST00000556098 SMUG1Q53HV7 270 aa8.29□□□□□ -1.08
CHGA-205ENST00000556098 FAM162BQ5T6X4 162 aa8.29□□□□□ -1.08
CHGA-205ENST00000556098 LINC00477Q96M19 166 aa8.29□□□□□ -1.08
CHGA-205ENST00000556098 GNB1LQ9BYB4 327 aa8.29□□□□□ -1.08
CHGA-205ENST00000556098 TRAV8-1A0A0A6YYK1 113 aa8.28□□□□□ -1.08
CHGA-205ENST00000556098 TRAV8-2A0A0B4J237 113 aa8.28□□□□□ -1.08
CHGA-205ENST00000556098 HLA-DQA1P01909 254 aa8.28□□□□□ -1.08
CHGA-205ENST00000556098 S100A8P05109 93 aa8.28□□□□□ -1.08
CHGA-205ENST00000556098 ZNF138P52744 262 aa8.28□□□□□ -1.08
CHGA-205ENST00000556098 FOXA3P55318 350 aaPredicted RBP8.28□□□□□ -1.08
CHGA-205ENST00000556098 SNRPD3P62318 126 aaKnown RBP8.28□□□□□ -1.08
CHGA-205ENST00000556098 TM4SF20Q53R12 229 aa8.28□□□□□ -1.08
CHGA-205ENST00000556098 ACTL10Q5JWF8 245 aa8.28□□□□□ -1.08
CHGA-205ENST00000556098 PRR27Q6MZM9 219 aa8.28□□□□□ -1.08
CHGA-205ENST00000556098 TCF24Q7RTU0 167 aa8.28□□□□□ -1.08
CHGA-205ENST00000556098 OR10J6PQ8NGY7 276 aa8.28□□□□□ -1.08
CHGA-205ENST00000556098 C2orf70A6NJV1 201 aa8.27□□□□□ -1.09
CHGA-205ENST00000556098 LY6G6CO95867 125 aa8.27□□□□□ -1.09
CHGA-205ENST00000556098 HIST1H1AQ02539 215 aaPredicted RBP8.27□□□□□ -1.09
CHGA-205ENST00000556098 RBPMS2Q6ZRY4 209 aaKnown RBP8.27□□□□□ -1.09
CHGA-205ENST00000556098 NHLRC2Q8NBF2 726 aa8.27□□□□□ -1.09
CHGA-205ENST00000556098 ZNF738Q8NE65 137 aa8.27□□□□□ -1.09
CHGA-205ENST00000556098 ZC2HC1AQ96GY0 325 aa8.27□□□□□ -1.09
CHGA-205ENST00000556098 ODF3Q96PU9 254 aa8.27□□□□□ -1.09
CHGA-205ENST00000556098 SIGLEC8Q9NYZ4 499 aa8.27□□□□□ -1.09
CHGA-205ENST00000556098 ALMS1Q8TCU4 4167 aa8.27□□□□□ -1.09
CHGA-205ENST00000556098 IGHV3OR16-13A0A075B7E8 117 aa8.26□□□□□ -1.09
CHGA-205ENST00000556098 IGKV2-40A0A087WW87 121 aaPredicted RBP8.26□□□□□ -1.09
CHGA-205ENST00000556098 IGHV3-49A0A0A0MS15 119 aa8.26□□□□□ -1.09
CHGA-205ENST00000556098 IGHV3-74A0A0B4J1X5 117 aa8.26□□□□□ -1.09
CHGA-205ENST00000556098 TRAV25A0A0B4J276 109 aa8.26□□□□□ -1.09
CHGA-205ENST00000556098 IGHV3-66A0A0C4DH42 116 aa8.26□□□□□ -1.09
CHGA-205ENST00000556098 FABP5P3A8MUU1 101 aa8.26□□□□□ -1.09
CHGA-205ENST00000556098 IGKV2D-40P01614 121 aaPredicted RBP8.26□□□□□ -1.09
CHGA-205ENST00000556098 CBLN1P23435 193 aa8.26□□□□□ -1.09
CHGA-205ENST00000556098 SYNJ2BPP57105 145 aa8.26□□□□□ -1.09
CHGA-205ENST00000556098 RPL11P62913 178 aaKnown RBP8.26□□□□□ -1.09
CHGA-205ENST00000556098 OR9G4Q8NGQ1 327 aa8.26□□□□□ -1.09
CHGA-205ENST00000556098 BORCS7Q96B45 105 aa8.26□□□□□ -1.09
CHGA-205ENST00000556098 HIGD1CA8MV81 97 aa8.25□□□□□ -1.09
CHGA-205ENST00000556098 TRGC2P03986 189 aa8.25□□□□□ -1.09
CHGA-205ENST00000556098 PLECQ15149 4684 aaKnown RBP8.25□□□□□ -1.09
CHGA-205ENST00000556098 OR2D3Q8NGH3 330 aa8.25□□□□□ -1.09
CHGA-205ENST00000556098 DCANP1Q8TF63 244 aa8.25□□□□□ -1.09
CHGA-205ENST00000556098 NEU1Q99519 415 aa8.25□□□□□ -1.09
CHGA-205ENST00000556098 TRAPPC1Q9Y5R8 145 aa8.25□□□□□ -1.09
CHGA-205ENST00000556098 LOC105371267A0A1B0GV96 52 aa8.24□□□□□ -1.09
CHGA-205ENST00000556098 K7EQG2 157 aa8.24□□□□□ -1.09
CHGA-205ENST00000556098 PHOX2AO14813 284 aa8.24□□□□□ -1.09
CHGA-205ENST00000556098 LINC01559Q495D7 138 aa8.24□□□□□ -1.09
CHGA-205ENST00000556098 Q8N1Y9 231 aa8.24□□□□□ -1.09
CHGA-205ENST00000556098 RNF182Q8N6D2 247 aa8.24□□□□□ -1.09
CHGA-205ENST00000556098 NUP35Q8NFH5 326 aa8.24□□□□□ -1.09
CHGA-205ENST00000556098 OR8A1Q8NGG7 326 aa8.24□□□□□ -1.09
CHGA-205ENST00000556098 IL17DQ8TAD2 202 aa8.24□□□□□ -1.09
CHGA-205ENST00000556098 SGK494Q96LW2 274 aa8.24□□□□□ -1.09
CHGA-205ENST00000556098 VGLL1Q99990 258 aa8.24□□□□□ -1.09
CHGA-205ENST00000556098 C19orf73Q9NVV2 129 aa8.24□□□□□ -1.09
CHGA-205ENST00000556098 TMEM189A5PLL7 270 aa8.23□□□□□ -1.09
CHGA-205ENST00000556098 C5orf52A6NGY3 159 aa8.23□□□□□ -1.09
CHGA-205ENST00000556098 ZNF705FA8MVS1 300 aaPredicted RBP8.23□□□□□ -1.09
CHGA-205ENST00000556098 UBE2CO00762 179 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms