RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 GDF5OSQ5U4N7 250 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 EBLN2Q6P2I7 272 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 H2BFWTQ7Z2G1 175 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 ZNF546Q86UE3 836 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 IQCF2Q8IXL9 164 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 ARRDC1Q8N5I2 433 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 Q8NBF4 154 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 OR1S2Q8NGQ3 325 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 MITD1Q8WV92 249 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 IGF2BP2-AS1Q96M15 143 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 NMES1Q9C002 83 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 SLC35B3Q9H1N7 401 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 ZNF586Q9NXT0 402 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 TNFSF18Q9UNG2 199 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 FLVCR2Q9UPI3 526 aa3.31□□□□□ -1.88
ATXN3-233ENST00000555816 FXYD6-FXYD2A0A087WZ82 144 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 ZNF705GA8MUZ8 300 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-233ENST00000555816 GPR31O00270 319 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 SOCS3O14543 225 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 GOSR2O14653 212 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 ARPC5O15511 151 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 CD3DP04234 171 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 FCER2P06734 321 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 TPT1P13693 172 aaKnown RBP3.3□□□□□ -1.88
ATXN3-233ENST00000555816 TSPOP30536 169 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 FUSP35637 526 aaKnown RBP eCLIP3.3□□□□□ -1.88
ATXN3-233ENST00000555816 OPRK1P41145 380 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 PSMB3P49720 205 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 LINC00315P59091 139 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 DEFB1P60022 68 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 YPEL3P61236 119 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-233ENST00000555816 RNASE10Q5GAN6 216 aaKnown RBP3.3□□□□□ -1.88
ATXN3-233ENST00000555816 FAM78BQ5VT40 261 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 Q6ZRN7 208 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-233ENST00000555816 SVBPQ8N300 66 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 INO80EQ8NBZ0 244 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-233ENST00000555816 OR51S1Q8NGJ8 323 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 OR1S1Q8NH92 325 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 RXFP4Q8TDU9 374 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 DEFB104AQ8WTQ1 72 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 GNPNAT1Q96EK6 184 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-233ENST00000555816 SEC22AQ96IW7 307 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 FXYD6Q9H0Q3 95 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 MRPL36Q9P0J6 103 aaKnown RBP3.3□□□□□ -1.88
ATXN3-233ENST00000555816 MBD2Q9UBB5 411 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 ANAPC10Q9UM13 185 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 MRPS16Q9Y3D3 137 aaKnown RBP3.3□□□□□ -1.88
ATXN3-233ENST00000555816 SRRM2Q9UQ35 2752 aaKnown RBP3.3□□□□□ -1.88
ATXN3-233ENST00000555816 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
ATXN3-233ENST00000555816 TRAV26-1A0A087WT03 109 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 A0A087WTM6 91 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 PIGBOS1A0A0B4J2F0 54 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 A0A0J9YX75 114 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 A0A0U1RRA0 63 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 C9orf170A2RU37 121 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 H3BNG1 76 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 PRM2P04554 102 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 IL4P05112 153 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 IGLC1P0CG04 106 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 RD3LP0DJH9 198 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 RNASE2P10153 161 aaKnown RBP3.29□□□□□ -1.88
ATXN3-233ENST00000555816 S100GP29377 79 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 S100A12P80511 92 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 OR5I1Q13606 314 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 TMEM128Q5BJH2 165 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 SPINK9Q5DT21 86 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 C10orf91Q5T1B1 145 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 SAMD13Q5VXD3 122 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 PRSS54Q6PEW0 395 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 ALKAL2Q6UX46 152 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 SLC35G3Q8N808 338 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 TERB2Q8NHR7 220 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 COQ8AQ8NI60 647 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 ZNF2Q9BSG1 426 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-233ENST00000555816 TMEM70Q9BUB7 260 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 PDCD10Q9BUL8 212 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 ENY2Q9NPA8 101 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 IFT46Q9NQC8 304 aa3.29□□□□□ -1.88
ATXN3-233ENST00000555816 CARHSP1Q9Y2V2 147 aaKnown RBP3.29□□□□□ -1.88
ATXN3-233ENST00000555816 VPS13BQ7Z7G8 4022 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 NACAE9PAV3 2078 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 PLAC8L1A1L4L8 177 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 TMEM218A2RU14 115 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 A8MTW9 85 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 F6UB75 175 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 ISLRO14498 428 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 SIVA1O15304 175 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 ADAP1O75689 374 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 ATG12O94817 140 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 DUSP14O95147 198 aaKnown RBP3.28□□□□□ -1.88
ATXN3-233ENST00000555816 SNAPINO95295 136 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 SFT2D2O95562 160 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 INSP01308 110 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 IGKV1-39P01597 117 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 IGKV1D-39P04432 117 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 OR10J1P30954 320 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 RND2P52198 227 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 TAS2R46P59540 309 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 BTN1A1Q13410 526 aa3.28□□□□□ -1.88
ATXN3-233ENST00000555816 GAMTQ14353 236 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms