RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 TP53TG3Q9ULZ0 132 aa12.86□□□□□ -0.35
NEDD1-208ENST00000555806 KLF12Q9Y4X4 402 aa12.86□□□□□ -0.35
NEDD1-208ENST00000555806 CDC34P49427 236 aaPredicted RBP12.85□□□□□ -0.35
NEDD1-208ENST00000555806 Q5BKY6 102 aa12.85□□□□□ -0.35
NEDD1-208ENST00000555806 IBA57Q5T440 356 aaKnown RBP12.85□□□□□ -0.35
NEDD1-208ENST00000555806 ASB13Q8WXK3 278 aa12.85□□□□□ -0.35
NEDD1-208ENST00000555806 DNAH17Q9UFH2 4485 aa12.85□□□□□ -0.35
NEDD1-208ENST00000555806 ATP6V0CP27449 155 aa12.84□□□□□ -0.35
NEDD1-208ENST00000555806 SOHLH1Q5JUK2 328 aa12.84□□□□□ -0.35
NEDD1-208ENST00000555806 MUC21Q5SSG8 566 aa12.84□□□□□ -0.35
NEDD1-208ENST00000555806 INO80EQ8NBZ0 244 aaPredicted RBP12.84□□□□□ -0.35
NEDD1-208ENST00000555806 OR2G3Q8NGZ4 309 aa12.84□□□□□ -0.35
NEDD1-208ENST00000555806 PSMG3Q9BT73 122 aaPredicted RBP12.84□□□□□ -0.35
NEDD1-208ENST00000555806 LINC00588Q9Y4M8 146 aa12.84□□□□□ -0.35
NEDD1-208ENST00000555806 LENEPQ9Y5L5 61 aa12.84□□□□□ -0.35
NEDD1-208ENST00000555806 FXYD6-FXYD2A0A087WZ82 144 aa12.83□□□□□ -0.36
NEDD1-208ENST00000555806 SPINK4O60575 86 aa12.83□□□□□ -0.36
NEDD1-208ENST00000555806 ARL14EPLP0DKL9 152 aa12.83□□□□□ -0.36
NEDD1-208ENST00000555806 ZNF415Q09FC8 603 aa12.83□□□□□ -0.36
NEDD1-208ENST00000555806 GOLT1AQ6ZVE7 132 aa12.83□□□□□ -0.36
NEDD1-208ENST00000555806 SSX7Q7RTT5 188 aa12.83□□□□□ -0.36
NEDD1-208ENST00000555806 ZNRF2Q8NHG8 242 aa12.83□□□□□ -0.36
NEDD1-208ENST00000555806 MRPL16Q9NX20 251 aaKnown RBP12.83□□□□□ -0.36
NEDD1-208ENST00000555806 FAT2Q9NYQ8 4349 aa12.83□□□□□ -0.36
NEDD1-208ENST00000555806 MBP02144 154 aa12.82□□□□□ -0.36
NEDD1-208ENST00000555806 RGS21Q2M5E4 152 aa12.82□□□□□ -0.36
NEDD1-208ENST00000555806 C1orf134Q5TEV5 83 aa12.82□□□□□ -0.36
NEDD1-208ENST00000555806 C18orf15Q96N68 181 aa12.82□□□□□ -0.36
NEDD1-208ENST00000555806 STAG3L2P0CL84 134 aa12.81□□□□□ -0.36
NEDD1-208ENST00000555806 STAG3L3P0CL85 134 aa12.81□□□□□ -0.36
NEDD1-208ENST00000555806 GNG5P63218 68 aa12.81□□□□□ -0.36
NEDD1-208ENST00000555806 SERF2P84101 59 aa12.81□□□□□ -0.36
NEDD1-208ENST00000555806 Q6AWC8 147 aa12.81□□□□□ -0.36
NEDD1-208ENST00000555806 OR2T35Q8NGX2 323 aa12.81□□□□□ -0.36
NEDD1-208ENST00000555806 TMED6Q8WW62 240 aa12.81□□□□□ -0.36
NEDD1-208ENST00000555806 RAB24Q969Q5 203 aa12.81□□□□□ -0.36
NEDD1-208ENST00000555806 SH3BGRL3Q9H299 93 aa12.81□□□□□ -0.36
NEDD1-208ENST00000555806 NAGKQ9UJ70 344 aa12.81□□□□□ -0.36
NEDD1-208ENST00000555806 NBDYA0A0U1RRE5 68 aa12.8□□□□□ -0.36
NEDD1-208ENST00000555806 A0A1B0GVY2 172 aa12.8□□□□□ -0.36
NEDD1-208ENST00000555806 H3BNG1 76 aa12.8□□□□□ -0.36
NEDD1-208ENST00000555806 IGHV3-53P01767 116 aa12.8□□□□□ -0.36
NEDD1-208ENST00000555806 FAM159AQ6UWV7 190 aa12.8□□□□□ -0.36
NEDD1-208ENST00000555806 ARL6IP6Q8N6S5 226 aa12.8□□□□□ -0.36
NEDD1-208ENST00000555806 TRAV8-1A0A0A6YYK1 113 aa12.79□□□□□ -0.36
NEDD1-208ENST00000555806 BORCS7-ASMTA0A0B4J1R7 106 aa12.79□□□□□ -0.36
NEDD1-208ENST00000555806 RNF222A6NCQ9 220 aa12.79□□□□□ -0.36
NEDD1-208ENST00000555806 GCHFRP30047 84 aa12.79□□□□□ -0.36
NEDD1-208ENST00000555806 TMEM183BQ1AE95 376 aa12.79□□□□□ -0.36
NEDD1-208ENST00000555806 RPL7L1Q6DKI1 246 aaKnown RBP12.79□□□□□ -0.36
NEDD1-208ENST00000555806 TMEM183AQ8IXX5 376 aa12.79□□□□□ -0.36
NEDD1-208ENST00000555806 ST6GAL2Q96JF0 529 aa12.79□□□□□ -0.36
NEDD1-208ENST00000555806 ACTR3CQ9C0K3 210 aaPredicted RBP12.79□□□□□ -0.36
NEDD1-208ENST00000555806 TNFSF18Q9UNG2 199 aa12.79□□□□□ -0.36
NEDD1-208ENST00000555806 TRGV11A0A075B6L2 103 aa12.78□□□□□ -0.36
NEDD1-208ENST00000555806 F6UZH7 168 aa12.78□□□□□ -0.36
NEDD1-208ENST00000555806 IQCF2Q8IXL9 164 aa12.78□□□□□ -0.36
NEDD1-208ENST00000555806 VSIG2Q96IQ7 327 aa12.78□□□□□ -0.36
NEDD1-208ENST00000555806 TREM1Q9NP99 234 aa12.78□□□□□ -0.36
NEDD1-208ENST00000555806 MDFICQ9P1T7 246 aa12.78□□□□□ -0.36
NEDD1-208ENST00000555806 CXorf1O96002 111 aa12.77□□□□□ -0.37
NEDD1-208ENST00000555806 ESRGQ1W209 222 aa12.77□□□□□ -0.37
NEDD1-208ENST00000555806 C5orf17Q8NAS9 161 aa12.77□□□□□ -0.37
NEDD1-208ENST00000555806 SGK494Q96LW2 274 aa12.77□□□□□ -0.37
NEDD1-208ENST00000555806 NDFIP1Q9BT67 221 aa12.77□□□□□ -0.37
NEDD1-208ENST00000555806 A0A096LPF7 62 aa12.76□□□□□ -0.37
NEDD1-208ENST00000555806 TRAV21A0A0B4J279 112 aa12.76□□□□□ -0.37
NEDD1-208ENST00000555806 PAX4O43316 350 aa12.76□□□□□ -0.37
NEDD1-208ENST00000555806 Q9H8V8 135 aa12.76□□□□□ -0.37
NEDD1-208ENST00000555806 TMEM167BQ9NRX6 74 aa12.76□□□□□ -0.37
NEDD1-208ENST00000555806 SERTM2A0A1B0GWG4 89 aa12.75□□□□□ -0.37
NEDD1-208ENST00000555806 K7EQM0 130 aa12.75□□□□□ -0.37
NEDD1-208ENST00000555806 C6orf223Q8N319 242 aa12.75□□□□□ -0.37
NEDD1-208ENST00000555806 SUN5Q8TC36 379 aa12.75□□□□□ -0.37
NEDD1-208ENST00000555806 TVP23CQ96ET8 276 aa12.75□□□□□ -0.37
NEDD1-208ENST00000555806 SPXQ9BT56 116 aa12.75□□□□□ -0.37
NEDD1-208ENST00000555806 ARPC5O15511 151 aa12.74□□□□□ -0.37
NEDD1-208ENST00000555806 TCRAP04437 139 aa12.74□□□□□ -0.37
NEDD1-208ENST00000555806 C8orf49Q96NF6 230 aa12.74□□□□□ -0.37
NEDD1-208ENST00000555806 PRO0255Q9UI72 69 aa12.74□□□□□ -0.37
NEDD1-208ENST00000555806 MRPS16Q9Y3D3 137 aaKnown RBP12.74□□□□□ -0.37
NEDD1-208ENST00000555806 ICOSQ9Y6W8 199 aa12.74□□□□□ -0.37
NEDD1-208ENST00000555806 MUC4Q99102 2169 aa12.74□□□□□ -0.37
NEDD1-208ENST00000555806 TRGV4A0A0C4DH28 118 aa12.73□□□□□ -0.37
NEDD1-208ENST00000555806 SUMO1P63165 101 aaKnown RBP12.73□□□□□ -0.37
NEDD1-208ENST00000555806 SLAQ13239 276 aa12.73□□□□□ -0.37
NEDD1-208ENST00000555806 TDRG1Q3Y452 100 aa12.73□□□□□ -0.37
NEDD1-208ENST00000555806 UPK3BQ9BT76 320 aa12.73□□□□□ -0.37
NEDD1-208ENST00000555806 SDF2L1Q9HCN8 221 aa12.73□□□□□ -0.37
NEDD1-208ENST00000555806 CTXND1A0A1B0GTU2 59 aa12.72□□□□□ -0.37
NEDD1-208ENST00000555806 GGTLC3B5MD39 225 aa12.72□□□□□ -0.37
NEDD1-208ENST00000555806 G3V3Q6 166 aa12.72□□□□□ -0.37
NEDD1-208ENST00000555806 GNRH2O43555 120 aa12.72□□□□□ -0.37
NEDD1-208ENST00000555806 SFTA3P0C7M3 94 aa12.72□□□□□ -0.37
NEDD1-208ENST00000555806 FHL2Q14192 279 aa12.72□□□□□ -0.37
NEDD1-208ENST00000555806 TTC32Q5I0X7 151 aa12.72□□□□□ -0.37
NEDD1-208ENST00000555806 AKR1C8PQ5T2L2 129 aa12.72□□□□□ -0.37
NEDD1-208ENST00000555806 PSG8Q9UQ74 426 aa12.72□□□□□ -0.37
NEDD1-208ENST00000555806 HHLA3Q9XRX5 114 aa12.72□□□□□ -0.37
NEDD1-208ENST00000555806 IGHV3-16A0A0C4DH30 117 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms