RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 GAGE12FP0CL80 117 aa14.4□□□□□ -0.1
VTI1B-205ENST00000555543 GAGE12GP0CL81 117 aa14.4□□□□□ -0.1
VTI1B-205ENST00000555543 GAGE12IP0CL82 117 aa14.4□□□□□ -0.1
VTI1B-205ENST00000555543 GCHFRP30047 84 aa14.4□□□□□ -0.1
VTI1B-205ENST00000555543 GNG5P63218 68 aa14.4□□□□□ -0.1
VTI1B-205ENST00000555543 ANXA2RQ3ZCQ2 193 aa14.4□□□□□ -0.1
VTI1B-205ENST00000555543 EIF4E3Q8N5X7 224 aaKnown RBP14.4□□□□□ -0.1
VTI1B-205ENST00000555543 GNPNAT1Q96EK6 184 aaPredicted RBP14.4□□□□□ -0.1
VTI1B-205ENST00000555543 TP53TG3Q9ULZ0 132 aa14.4□□□□□ -0.1
VTI1B-205ENST00000555543 DAZ2Q13117 558 aaKnown RBP14.39□□□□□ -0.11
VTI1B-205ENST00000555543 LGALSLQ3ZCW2 172 aaPredicted RBP14.39□□□□□ -0.11
VTI1B-205ENST00000555543 Q6ZTI0 123 aa14.39□□□□□ -0.11
VTI1B-205ENST00000555543 GOLT1AQ6ZVE7 132 aa14.39□□□□□ -0.11
VTI1B-205ENST00000555543 ZNF680Q8NEM1 530 aa14.39□□□□□ -0.11
VTI1B-205ENST00000555543 CMTM2Q8TAZ6 248 aa14.39□□□□□ -0.11
VTI1B-205ENST00000555543 SUN5Q8TC36 379 aa14.39□□□□□ -0.11
VTI1B-205ENST00000555543 RGS13O14921 159 aa14.38□□□□□ -0.11
VTI1B-205ENST00000555543 ZNF726P1Q15940 193 aa14.38□□□□□ -0.11
VTI1B-205ENST00000555543 FAM74A1Q5RGS3 127 aa14.38□□□□□ -0.11
VTI1B-205ENST00000555543 C15orf53Q8NAA6 179 aa14.38□□□□□ -0.11
VTI1B-205ENST00000555543 CYTL1Q9NRR1 136 aa14.38□□□□□ -0.11
VTI1B-205ENST00000555543 HECTD4Q9Y4D8 3996 aa14.37□□□□□ -0.11
VTI1B-205ENST00000555543 IGHV1OR15-1A0A075B7D0 117 aa14.37□□□□□ -0.11
VTI1B-205ENST00000555543 TRAV8-1A0A0A6YYK1 113 aa14.37□□□□□ -0.11
VTI1B-205ENST00000555543 TMED6Q8WW62 240 aa14.37□□□□□ -0.11
VTI1B-205ENST00000555543 ACTR3CQ9C0K3 210 aaPredicted RBP14.37□□□□□ -0.11
VTI1B-205ENST00000555543 KLF12Q9Y4X4 402 aa14.37□□□□□ -0.11
VTI1B-205ENST00000555543 LENEPQ9Y5L5 61 aa14.37□□□□□ -0.11
VTI1B-205ENST00000555543 HOXA5P20719 270 aa14.36□□□□□ -0.11
VTI1B-205ENST00000555543 TCL1AP56279 114 aa14.36□□□□□ -0.11
VTI1B-205ENST00000555543 UBE2DNLQ8IWF7 75 aa14.36□□□□□ -0.11
VTI1B-205ENST00000555543 ARL6IP6Q8N6S5 226 aa14.36□□□□□ -0.11
VTI1B-205ENST00000555543 TMPRSS5Q9H3S3 457 aa14.36□□□□□ -0.11
VTI1B-205ENST00000555543 BOLA1Q9Y3E2 137 aa14.36□□□□□ -0.11
VTI1B-205ENST00000555543 GGTLC3B5MD39 225 aa14.35□□□□□ -0.11
VTI1B-205ENST00000555543 CXorf1O96002 111 aa14.35□□□□□ -0.11
VTI1B-205ENST00000555543 ZNF345Q14585 488 aa14.35□□□□□ -0.11
VTI1B-205ENST00000555543 MUC21Q5SSG8 566 aa14.35□□□□□ -0.11
VTI1B-205ENST00000555543 IBA57Q5T440 356 aaKnown RBP14.35□□□□□ -0.11
VTI1B-205ENST00000555543 Q6AWC8 147 aa14.35□□□□□ -0.11
VTI1B-205ENST00000555543 TVP23CQ96ET8 276 aa14.35□□□□□ -0.11
VTI1B-205ENST00000555543 DNAH17Q9UFH2 4485 aa14.35□□□□□ -0.11
VTI1B-205ENST00000555543 A0A0D9SG52 128 aa14.34□□□□□ -0.11
VTI1B-205ENST00000555543 TAAR5O14804 337 aa14.34□□□□□ -0.11
VTI1B-205ENST00000555543 NUDT3O95989 172 aa14.34□□□□□ -0.11
VTI1B-205ENST00000555543 TMUB2Q71RG4 321 aa14.34□□□□□ -0.11
VTI1B-205ENST00000555543 KCNRGQ8N5I3 272 aa14.34□□□□□ -0.11
VTI1B-205ENST00000555543 NACAE9PAV3 2078 aa14.34□□□□□ -0.11
VTI1B-205ENST00000555543 TRGV1A0A0A0MS02 117 aa14.33□□□□□ -0.12
VTI1B-205ENST00000555543 F6UZH7 168 aa14.33□□□□□ -0.12
VTI1B-205ENST00000555543 SPINK4O60575 86 aa14.33□□□□□ -0.12
VTI1B-205ENST00000555543 OR5I1Q13606 314 aa14.33□□□□□ -0.12
VTI1B-205ENST00000555543 RNF212Q495C1 297 aa14.33□□□□□ -0.12
VTI1B-205ENST00000555543 C5orf17Q8NAS9 161 aa14.33□□□□□ -0.12
VTI1B-205ENST00000555543 SGK494Q96LW2 274 aa14.33□□□□□ -0.12
VTI1B-205ENST00000555543 ARPC5LQ9BPX5 153 aa14.33□□□□□ -0.12
VTI1B-205ENST00000555543 TMEM167BQ9NRX6 74 aa14.33□□□□□ -0.12
VTI1B-205ENST00000555543 FAT2Q9NYQ8 4349 aa14.33□□□□□ -0.12
VTI1B-205ENST00000555543 TRAV26-1A0A087WT03 109 aa14.32□□□□□ -0.12
VTI1B-205ENST00000555543 CTXND1A0A1B0GTU2 59 aa14.32□□□□□ -0.12
VTI1B-205ENST00000555543 TCRAP04437 139 aa14.32□□□□□ -0.12
VTI1B-205ENST00000555543 IQCF2Q8IXL9 164 aa14.32□□□□□ -0.12
VTI1B-205ENST00000555543 IGLV2-18A0A075B6J9 118 aa14.31□□□□□ -0.12
VTI1B-205ENST00000555543 TRGV2A0A075B6R0 118 aa14.31□□□□□ -0.12
VTI1B-205ENST00000555543 M0R2N4 97 aa14.31□□□□□ -0.12
VTI1B-205ENST00000555543 SUMO1P63165 101 aaKnown RBP14.31□□□□□ -0.12
VTI1B-205ENST00000555543 AKR1C8PQ5T2L2 129 aa14.31□□□□□ -0.12
VTI1B-205ENST00000555543 C18orf15Q96N68 181 aa14.31□□□□□ -0.12
VTI1B-205ENST00000555543 TREM1Q9NP99 234 aa14.31□□□□□ -0.12
VTI1B-205ENST00000555543 MRPL16Q9NX20 251 aaKnown RBP14.31□□□□□ -0.12
VTI1B-205ENST00000555543 MDFICQ9P1T7 246 aa14.31□□□□□ -0.12
VTI1B-205ENST00000555543 A0A0J9YY99 117 aa14.3□□□□□ -0.12
VTI1B-205ENST00000555543 FGF8P55075 233 aaPredicted RBP14.3□□□□□ -0.12
VTI1B-205ENST00000555543 ZNF415Q09FC8 603 aa14.3□□□□□ -0.12
VTI1B-205ENST00000555543 SERTM2A0A1B0GWG4 89 aa14.29□□□□□ -0.12
VTI1B-205ENST00000555543 IGLV2-11P01706 119 aa14.29□□□□□ -0.12
VTI1B-205ENST00000555543 TMEM183BQ1AE95 376 aa14.29□□□□□ -0.12
VTI1B-205ENST00000555543 TMEM183AQ8IXX5 376 aa14.29□□□□□ -0.12
VTI1B-205ENST00000555543 NAGKQ9UJ70 344 aa14.29□□□□□ -0.12
VTI1B-205ENST00000555543 EPDR1Q9UM22 224 aa14.29□□□□□ -0.12
VTI1B-205ENST00000555543 A0A1W2PRE2 83 aa14.28□□□□□ -0.12
VTI1B-205ENST00000555543 BCL2L11O43521 198 aa14.28□□□□□ -0.12
VTI1B-205ENST00000555543 UBE2G2P60604 165 aa14.28□□□□□ -0.12
VTI1B-205ENST00000555543 FAM159AQ6UWV7 190 aa14.28□□□□□ -0.12
VTI1B-205ENST00000555543 ATG101Q9BSB4 218 aa14.28□□□□□ -0.12
VTI1B-205ENST00000555543 KANTRA0A1W2PQU2 76 aa14.27□□□□□ -0.13
VTI1B-205ENST00000555543 FHITP49789 147 aa14.27□□□□□ -0.13
VTI1B-205ENST00000555543 LGALS9BQ3B8N2 356 aa14.27□□□□□ -0.13
VTI1B-205ENST00000555543 TDRG1Q3Y452 100 aa14.27□□□□□ -0.13
VTI1B-205ENST00000555543 Q6ZR54 194 aa14.27□□□□□ -0.13
VTI1B-205ENST00000555543 CYB561D1Q8N8Q1 229 aa14.27□□□□□ -0.13
VTI1B-205ENST00000555543 C8orf49Q96NF6 230 aa14.27□□□□□ -0.13
VTI1B-205ENST00000555543 PSG8Q9UQ74 426 aa14.27□□□□□ -0.13
VTI1B-205ENST00000555543 MUC4Q99102 2169 aa14.27□□□□□ -0.13
VTI1B-205ENST00000555543 TRGV11A0A075B6L2 103 aa14.26□□□□□ -0.13
VTI1B-205ENST00000555543 TRAV21A0A0B4J279 112 aa14.26□□□□□ -0.13
VTI1B-205ENST00000555543 MAP1LC3B2A6NCE7 125 aa14.26□□□□□ -0.13
VTI1B-205ENST00000555543 ZNF80P51504 273 aaPredicted RBP14.26□□□□□ -0.13
VTI1B-205ENST00000555543 VSIG2Q96IQ7 327 aa14.26□□□□□ -0.13
VTI1B-205ENST00000555543 MAP1LC3BQ9GZQ8 125 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms