RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SLC35B3Q9H1N7 401 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 ZNF586Q9NXT0 402 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 EHFQ9NZC4 300 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 TNFSF18Q9UNG2 199 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 FLVCR2Q9UPI3 526 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 FXYD6-FXYD2A0A087WZ82 144 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 ZNF705GA8MUZ8 300 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-228ENST00000554592 GPR31O00270 319 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 SOCS3O14543 225 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 GOSR2O14653 212 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 ARPC5O15511 151 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 TPT1P13693 172 aaKnown RBP3.3□□□□□ -1.88
ATXN3-228ENST00000554592 PGAM2P15259 253 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 TSPOP30536 169 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 FUSP35637 526 aaKnown RBP eCLIP3.3□□□□□ -1.88
ATXN3-228ENST00000554592 OPRK1P41145 380 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 PSMB3P49720 205 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 LINC00315P59091 139 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 DEFB1P60022 68 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 YPEL3P61236 119 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-228ENST00000554592 FAM78BQ5VT40 261 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 Q6ZRN7 208 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-228ENST00000554592 TMED4Q7Z7H5 227 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 KRTAP7-1Q8IUC3 87 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 SVBPQ8N300 66 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 INO80EQ8NBZ0 244 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-228ENST00000554592 OR1S1Q8NH92 325 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 RXFP4Q8TDU9 374 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 DEFB104AQ8WTQ1 72 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 GNPNAT1Q96EK6 184 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-228ENST00000554592 SEC22AQ96IW7 307 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 FXYD6Q9H0Q3 95 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 MRPL36Q9P0J6 103 aaKnown RBP3.3□□□□□ -1.88
ATXN3-228ENST00000554592 MBD2Q9UBB5 411 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 C14orf166Q9Y224 244 aaKnown RBP3.3□□□□□ -1.88
ATXN3-228ENST00000554592 MRPS16Q9Y3D3 137 aaKnown RBP3.3□□□□□ -1.88
ATXN3-228ENST00000554592 SRRM2Q9UQ35 2752 aaKnown RBP3.3□□□□□ -1.88
ATXN3-228ENST00000554592 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
ATXN3-228ENST00000554592 TRAV26-1A0A087WT03 109 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 A0A087WTM6 91 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 PIGBOS1A0A0B4J2F0 54 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 A0A0J9YX75 114 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 A0A0U1RRA0 63 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 C9orf170A2RU37 121 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 H3BNG1 76 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 H7C423 109 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 PMP2P02689 132 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 PRM2P04554 102 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 IL4P05112 153 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 IGLC1P0CG04 106 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 RD3LP0DJH9 198 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 RNASE2P10153 161 aaKnown RBP3.29□□□□□ -1.88
ATXN3-228ENST00000554592 S100GP29377 79 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 S100A12P80511 92 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 OR5I1Q13606 314 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 TMEM128Q5BJH2 165 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 SPINK9Q5DT21 86 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 C10orf91Q5T1B1 145 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 SAMD13Q5VXD3 122 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 PRSS54Q6PEW0 395 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 ALKAL2Q6UX46 152 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 SLC35G3Q8N808 338 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 CCDC71LQ8N9Z2 235 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 OR13C8Q8NGS7 320 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 TERB2Q8NHR7 220 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 COQ8AQ8NI60 647 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 ZNF2Q9BSG1 426 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-228ENST00000554592 TMEM70Q9BUB7 260 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 PDCD10Q9BUL8 212 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 ENY2Q9NPA8 101 aa3.29□□□□□ -1.88
ATXN3-228ENST00000554592 CARHSP1Q9Y2V2 147 aaKnown RBP3.29□□□□□ -1.88
ATXN3-228ENST00000554592 VPS13BQ7Z7G8 4022 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 NACAE9PAV3 2078 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 PLAC8L1A1L4L8 177 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 TMEM218A2RU14 115 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 A8MTW9 85 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 F6UB75 175 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 ISLRO14498 428 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 SIVA1O15304 175 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 ADAP1O75689 374 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 ATG12O94817 140 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 DUSP14O95147 198 aaKnown RBP3.28□□□□□ -1.88
ATXN3-228ENST00000554592 SNAPINO95295 136 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 SFT2D2O95562 160 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 INSP01308 110 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 IGKV1-39P01597 117 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 IGKV1D-39P04432 117 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 AZU1P20160 251 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 OR10J1P30954 320 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 RND2P52198 227 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 SRPXP78539 464 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 BTN1A1Q13410 526 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 PPP1R1AQ13522 171 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 GAMTQ14353 236 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 C1orf194Q5T5A4 169 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 AMTNQ6UX39 209 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 Q6ZRG5 221 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 LHFPL1Q86WI0 220 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 BAP18Q8IXM2 172 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms