RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 SBF1O95248 1867 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 MYO5AQ9Y4I1 1855 aaKnown RBP2.35□□□□□ -2.03
SCFD1-211ENST00000554437 SCN8AQ9UQD0 1980 aa2.34□□□□□ -2.03
SCFD1-211ENST00000554437 SLIT2O94813 1529 aa2.34□□□□□ -2.03
SCFD1-211ENST00000554437 A0A087WSZ3 146 aa2.34□□□□□ -2.03
SCFD1-211ENST00000554437 TRAV12-1A0A0B4J245 112 aa2.34□□□□□ -2.03
SCFD1-211ENST00000554437 EDF1O60869 148 aaKnown RBP2.34□□□□□ -2.03
SCFD1-211ENST00000554437 PITX3O75364 302 aa2.34□□□□□ -2.03
SCFD1-211ENST00000554437 KLF7O75840 302 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-211ENST00000554437 PKIAP61925 76 aa2.34□□□□□ -2.03
SCFD1-211ENST00000554437 DEFB113Q30KQ7 82 aa2.34□□□□□ -2.03
SCFD1-211ENST00000554437 Q56UQ5 140 aa2.34□□□□□ -2.03
SCFD1-211ENST00000554437 LINC00269Q8N2A0 174 aa2.34□□□□□ -2.03
SCFD1-211ENST00000554437 FAM19A2Q8N3H0 131 aa2.34□□□□□ -2.03
SCFD1-211ENST00000554437 NOP16Q9Y3C1 178 aaKnown RBP2.34□□□□□ -2.03
SCFD1-211ENST00000554437 SCN9AQ15858 1988 aa2.34□□□□□ -2.04
SCFD1-211ENST00000554437 A2ML1A8K2U0 1454 aa2.33□□□□□ -2.04
SCFD1-211ENST00000554437 TRAV10A0A0B4J240 114 aa2.33□□□□□ -2.04
SCFD1-211ENST00000554437 A0A1W2PNN7 141 aa2.33□□□□□ -2.04
SCFD1-211ENST00000554437 ERC2-IT1O76042 136 aa2.33□□□□□ -2.04
SCFD1-211ENST00000554437 HSD52Q0P140 79 aa2.33□□□□□ -2.04
SCFD1-211ENST00000554437 CATR1Q13166 79 aa2.33□□□□□ -2.04
SCFD1-211ENST00000554437 MRPL54Q6P161 138 aaKnown RBP2.33□□□□□ -2.04
SCFD1-211ENST00000554437 C2orf82Q6UX34 121 aa2.33□□□□□ -2.04
SCFD1-211ENST00000554437 CASC2Q6XLA1 102 aa2.33□□□□□ -2.04
SCFD1-211ENST00000554437 SFT2D1Q8WV19 159 aa2.33□□□□□ -2.04
SCFD1-211ENST00000554437 RPRMQ9NS64 109 aa2.33□□□□□ -2.04
SCFD1-211ENST00000554437 TAS2R8Q9NYW2 309 aa2.33□□□□□ -2.04
SCFD1-211ENST00000554437 CHCHD2Q9Y6H1 151 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-211ENST00000554437 SDK2Q58EX2 2172 aa2.33□□□□□ -2.04
SCFD1-211ENST00000554437 PZPP20742 1482 aa2.33□□□□□ -2.04
SCFD1-211ENST00000554437 FANCMQ8IYD8 2048 aa2.32□□□□□ -2.04
SCFD1-211ENST00000554437 SMARCA4P51532 1647 aa2.32□□□□□ -2.04
SCFD1-211ENST00000554437 J3QLW9 94 aa2.32□□□□□ -2.04
SCFD1-211ENST00000554437 APOC4-APOC2K7ER74 178 aa2.32□□□□□ -2.04
SCFD1-211ENST00000554437 GEMIN2O14893 280 aaKnown RBP2.32□□□□□ -2.04
SCFD1-211ENST00000554437 APOC2P02655 101 aa2.32□□□□□ -2.04
SCFD1-211ENST00000554437 NCMAPQ5T1S8 102 aa2.32□□□□□ -2.04
SCFD1-211ENST00000554437 GKN2Q86XP6 184 aa2.32□□□□□ -2.04
SCFD1-211ENST00000554437 CLECL1Q8IZS7 167 aa2.32□□□□□ -2.04
SCFD1-211ENST00000554437 TIMM21Q9BVV7 248 aa2.32□□□□□ -2.04
SCFD1-211ENST00000554437 SERP1Q9Y6X1 66 aa2.32□□□□□ -2.04
SCFD1-211ENST00000554437 KTN1Q86UP2 1357 aaKnown RBP2.32□□□□□ -2.04
SCFD1-211ENST00000554437 CFTRP13569 1480 aa2.32□□□□□ -2.04
SCFD1-211ENST00000554437 PVALEFA0A1B0GWK0 134 aa2.31□□□□□ -2.04
SCFD1-211ENST00000554437 E7EQL1 145 aa2.31□□□□□ -2.04
SCFD1-211ENST00000554437 ELOBQ15370 118 aa2.31□□□□□ -2.04
SCFD1-211ENST00000554437 OR2T2Q6IF00 324 aa2.31□□□□□ -2.04
SCFD1-211ENST00000554437 VSTM2AQ8TAG5 236 aa2.31□□□□□ -2.04
SCFD1-211ENST00000554437 PRR14LQ5THK1 2151 aa2.31□□□□□ -2.04
SCFD1-211ENST00000554437 MALRD1Q5VYJ5 2156 aa2.31□□□□□ -2.04
SCFD1-211ENST00000554437 ZNF609O15014 1411 aa2.31□□□□□ -2.04
SCFD1-211ENST00000554437 ADGRB1O14514 1584 aa2.31□□□□□ -2.04
SCFD1-211ENST00000554437 CPAMD8Q8IZJ3 1885 aa2.31□□□□□ -2.04
SCFD1-211ENST00000554437 TRPM6Q9BX84 2022 aa2.3□□□□□ -2.04
SCFD1-211ENST00000554437 POLEQ07864 2286 aa2.3□□□□□ -2.04
SCFD1-211ENST00000554437 A0A0G2JQZ4 141 aa2.3□□□□□ -2.04
SCFD1-211ENST00000554437 C2orf70A6NJV1 201 aa2.3□□□□□ -2.04
SCFD1-211ENST00000554437 MCRIP1C9JLW8 97 aa2.3□□□□□ -2.04
SCFD1-211ENST00000554437 CXCL8P10145 99 aa2.3□□□□□ -2.04
SCFD1-211ENST00000554437 SVBPQ8N300 66 aa2.3□□□□□ -2.04
SCFD1-211ENST00000554437 PLPP5Q8NEB5 264 aa2.3□□□□□ -2.04
SCFD1-211ENST00000554437 ZNF431Q8TF32 576 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-211ENST00000554437 HEATR5AQ86XA9 2040 aa2.3□□□□□ -2.04
SCFD1-211ENST00000554437 MYH7P12883 1935 aa2.29□□□□□ -2.04
SCFD1-211ENST00000554437 ANAPC1Q9H1A4 1944 aa2.29□□□□□ -2.04
SCFD1-211ENST00000554437 IL5P05113 134 aa2.29□□□□□ -2.04
SCFD1-211ENST00000554437 IFITM1P13164 125 aa2.29□□□□□ -2.04
SCFD1-211ENST00000554437 MIR22HGQ0VDD5 57 aa2.29□□□□□ -2.04
SCFD1-211ENST00000554437 PDE6HQ13956 83 aa2.29□□□□□ -2.04
SCFD1-211ENST00000554437 C9orf153Q5TBE3 101 aa2.29□□□□□ -2.04
SCFD1-211ENST00000554437 Q6AWC8 147 aa2.29□□□□□ -2.04
SCFD1-211ENST00000554437 FOXI2Q6ZQN5 318 aa2.29□□□□□ -2.04
SCFD1-211ENST00000554437 SLC25A26Q70HW3 274 aa2.29□□□□□ -2.04
SCFD1-211ENST00000554437 Q8TAT8 98 aa2.29□□□□□ -2.04
SCFD1-211ENST00000554437 SPTSSAQ969W0 71 aa2.29□□□□□ -2.04
SCFD1-211ENST00000554437 GLI3P10071 1580 aa2.28□□□□□ -2.04
SCFD1-211ENST00000554437 ZFYVE16Q7Z3T8 1539 aa2.28□□□□□ -2.04
SCFD1-211ENST00000554437 SPINK8P0C7L1 97 aa2.28□□□□□ -2.04
SCFD1-211ENST00000554437 BRS3P32247 399 aa2.28□□□□□ -2.04
SCFD1-211ENST00000554437 S100A10P60903 97 aa2.28□□□□□ -2.04
SCFD1-211ENST00000554437 ZNF833PQ6ZTB9 187 aa2.28□□□□□ -2.04
SCFD1-211ENST00000554437 DYNLRB2Q8TF09 96 aa2.28□□□□□ -2.04
SCFD1-211ENST00000554437 LSM10Q969L4 123 aaKnown RBP2.28□□□□□ -2.04
SCFD1-211ENST00000554437 LINC00526Q96FQ7 95 aa2.28□□□□□ -2.04
SCFD1-211ENST00000554437 TMEM242Q9NWH2 141 aa2.28□□□□□ -2.04
SCFD1-211ENST00000554437 MYO16Q9Y6X6 1858 aa2.28□□□□□ -2.04
SCFD1-211ENST00000554437 ABCC10Q5T3U5 1492 aa2.27□□□□□ -2.05
SCFD1-211ENST00000554437 RTEL1-TNFRSF6BF6WH68 1400 aa2.27□□□□□ -2.05
SCFD1-211ENST00000554437 TRAV14DV4A0A0A6YYC5 116 aa2.27□□□□□ -2.05
SCFD1-211ENST00000554437 SDHAF1A6NFY7 115 aa2.27□□□□□ -2.05
SCFD1-211ENST00000554437 SNCGO76070 127 aa2.27□□□□□ -2.05
SCFD1-211ENST00000554437 NDUFB6O95139 128 aa2.27□□□□□ -2.05
SCFD1-211ENST00000554437 ADCYAP1P18509 176 aa2.27□□□□□ -2.05
SCFD1-211ENST00000554437 KRTAP12-3P60328 96 aa2.27□□□□□ -2.05
SCFD1-211ENST00000554437 TPRXLQ17RH7 258 aa2.27□□□□□ -2.05
SCFD1-211ENST00000554437 Q1T7F1 81 aa2.27□□□□□ -2.05
SCFD1-211ENST00000554437 COL5A1-AS1Q5SY13 56 aa2.27□□□□□ -2.05
SCFD1-211ENST00000554437 Q6ZS92 163 aa2.27□□□□□ -2.05
SCFD1-211ENST00000554437 ZCCHC23Q6ZST2 131 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms