RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 MORN5Q5VZ52 161 aa9.44□□□□□ -0.9
SHMT2-211ENST00000554310 LINC01551Q86U37 167 aa9.44□□□□□ -0.9
SHMT2-211ENST00000554310 SLC50A1Q9BRV3 221 aa9.44□□□□□ -0.9
SHMT2-211ENST00000554310 PAXXQ9BUH6 204 aa9.44□□□□□ -0.9
SHMT2-211ENST00000554310 OR51M1Q9H341 326 aa9.44□□□□□ -0.9
SHMT2-211ENST00000554310 PLECQ15149 4684 aaKnown RBP9.44□□□□□ -0.9
SHMT2-211ENST00000554310 TRBV24-1A0A075B6N3 115 aa9.43□□□□□ -0.9
SHMT2-211ENST00000554310 TRAV5A0A0B4J249 113 aa9.43□□□□□ -0.9
SHMT2-211ENST00000554310 SMIM9A6NGZ8 99 aa9.43□□□□□ -0.9
SHMT2-211ENST00000554310 PPP1R2P9O14990 202 aa9.43□□□□□ -0.9
SHMT2-211ENST00000554310 AMBPP02760 352 aa9.43□□□□□ -0.9
SHMT2-211ENST00000554310 CNN1P51911 297 aaKnown RBP9.43□□□□□ -0.9
SHMT2-211ENST00000554310 FXYD7P58549 80 aa9.43□□□□□ -0.9
SHMT2-211ENST00000554310 AMTNQ6UX39 209 aa9.43□□□□□ -0.9
SHMT2-211ENST00000554310 LINC00476Q8WZB0 136 aa9.43□□□□□ -0.9
SHMT2-211ENST00000554310 TCEAL7Q9BRU2 100 aa9.43□□□□□ -0.9
SHMT2-211ENST00000554310 GOLT1BQ9Y3E0 138 aa9.43□□□□□ -0.9
SHMT2-211ENST00000554310 H7BYZ3 331 aa9.42□□□□□ -0.9
SHMT2-211ENST00000554310 CXCL1P09341 107 aa9.42□□□□□ -0.9
SHMT2-211ENST00000554310 OR10J4P0C629 311 aa9.42□□□□□ -0.9
SHMT2-211ENST00000554310 IGLC2P0DOY2 106 aa9.42□□□□□ -0.9
SHMT2-211ENST00000554310 PSG3Q16557 428 aa9.42□□□□□ -0.9
SHMT2-211ENST00000554310 IGFL4Q6B9Z1 124 aa9.42□□□□□ -0.9
SHMT2-211ENST00000554310 OR8A1Q8NGG7 326 aa9.42□□□□□ -0.9
SHMT2-211ENST00000554310 FXYD5Q96DB9 178 aa9.42□□□□□ -0.9
SHMT2-211ENST00000554310 PYGO2Q9BRQ0 406 aa9.42□□□□□ -0.9
SHMT2-211ENST00000554310 DERL1Q9BUN8 251 aa9.42□□□□□ -0.9
SHMT2-211ENST00000554310 ZNF331Q9NQX6 463 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-211ENST00000554310 BIN3Q9NQY0 253 aa9.42□□□□□ -0.9
SHMT2-211ENST00000554310 TRBV20OR9-2A0A075B6H5 130 aa9.41□□□□□ -0.9
SHMT2-211ENST00000554310 TGIF2-C20orf24A0A0A6YYL0 155 aa9.41□□□□□ -0.9
SHMT2-211ENST00000554310 TMEM189A5PLL7 270 aa9.41□□□□□ -0.9
SHMT2-211ENST00000554310 GGTLC3B5MD39 225 aa9.41□□□□□ -0.9
SHMT2-211ENST00000554310 INSP01308 110 aa9.41□□□□□ -0.9
SHMT2-211ENST00000554310 PFN1P07737 140 aaKnown RBP9.41□□□□□ -0.9
SHMT2-211ENST00000554310 S100PP25815 95 aa9.41□□□□□ -0.9
SHMT2-211ENST00000554310 HIST1H1AQ02539 215 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-211ENST00000554310 C2CD4CQ8TF44 421 aa9.41□□□□□ -0.9
SHMT2-211ENST00000554310 IGF2BP2-AS1Q96M15 143 aa9.41□□□□□ -0.9
SHMT2-211ENST00000554310 IGHV3OR16-12A0A075B7B8 117 aa9.4□□□□□ -0.9
SHMT2-211ENST00000554310 TEX48A0A1B0GUV7 120 aa9.4□□□□□ -0.9
SHMT2-211ENST00000554310 SLC17A3O00476 420 aa9.4□□□□□ -0.9
SHMT2-211ENST00000554310 PYYP10082 97 aa9.4□□□□□ -0.9
SHMT2-211ENST00000554310 HLA-DMBP28068 263 aa9.4□□□□□ -0.9
SHMT2-211ENST00000554310 RPS10P46783 165 aaKnown RBP9.4□□□□□ -0.9
SHMT2-211ENST00000554310 TCTAP57738 103 aa9.4□□□□□ -0.9
SHMT2-211ENST00000554310 SUMO1P63165 101 aaKnown RBP9.4□□□□□ -0.9
SHMT2-211ENST00000554310 FAM210BQ96KR6 192 aa9.4□□□□□ -0.9
SHMT2-211ENST00000554310 IMMP2LQ96T52 175 aa9.4□□□□□ -0.9
SHMT2-211ENST00000554310 TMEM14CQ9P0S9 112 aa9.4□□□□□ -0.9
SHMT2-211ENST00000554310 URGCP-MRPS24S4R325 110 aa9.4□□□□□ -0.9
SHMT2-211ENST00000554310 ZNF253O75346 499 aa9.39□□□□□ -0.91
SHMT2-211ENST00000554310 RPL35P42766 123 aaKnown RBP9.39□□□□□ -0.91
SHMT2-211ENST00000554310 SPINK13Q1W4C9 94 aa9.39□□□□□ -0.91
SHMT2-211ENST00000554310 ZFP82Q8N141 532 aa9.39□□□□□ -0.91
SHMT2-211ENST00000554310 C1orf158Q8N1D5 194 aa9.39□□□□□ -0.91
SHMT2-211ENST00000554310 OCC1Q8TAD7 63 aa9.39□□□□□ -0.91
SHMT2-211ENST00000554310 BTF3L4Q96K17 158 aa9.39□□□□□ -0.91
SHMT2-211ENST00000554310 CELA1Q9UNI1 258 aa9.39□□□□□ -0.91
SHMT2-211ENST00000554310 TRAV10A0A0B4J240 114 aa9.38□□□□□ -0.91
SHMT2-211ENST00000554310 M0R2Z0 102 aa9.38□□□□□ -0.91
SHMT2-211ENST00000554310 SNRPCP09234 159 aaKnown RBP9.38□□□□□ -0.91
SHMT2-211ENST00000554310 TAS2R60P59551 318 aa9.38□□□□□ -0.91
SHMT2-211ENST00000554310 KCNIP4Q6PIL6 250 aa9.38□□□□□ -0.91
SHMT2-211ENST00000554310 Q6ZTC4 211 aa9.38□□□□□ -0.91
SHMT2-211ENST00000554310 SFRP2Q96HF1 295 aa9.38□□□□□ -0.91
SHMT2-211ENST00000554310 TMEM208Q9BTX3 173 aa9.38□□□□□ -0.91
SHMT2-211ENST00000554310 PPP1R14DQ9NXH3 145 aa9.38□□□□□ -0.91
SHMT2-211ENST00000554310 PGPEP1LA6NFU8 196 aa9.37□□□□□ -0.91
SHMT2-211ENST00000554310 H3BTX0 84 aa9.37□□□□□ -0.91
SHMT2-211ENST00000554310 CRXO43186 299 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-211ENST00000554310 LY6G6CO95867 125 aa9.37□□□□□ -0.91
SHMT2-211ENST00000554310 NBEAP1P0C6P0 100 aa9.37□□□□□ -0.91
SHMT2-211ENST00000554310 SPART-AS1P0CW21 52 aa9.37□□□□□ -0.91
SHMT2-211ENST00000554310 GNG4P50150 75 aa9.37□□□□□ -0.91
SHMT2-211ENST00000554310 PDE6HQ13956 83 aa9.37□□□□□ -0.91
SHMT2-211ENST00000554310 RRN3P1Q2M238 152 aa9.37□□□□□ -0.91
SHMT2-211ENST00000554310 CENPWQ5EE01 88 aa9.37□□□□□ -0.91
SHMT2-211ENST00000554310 OR10G8Q8NGN5 311 aa9.37□□□□□ -0.91
SHMT2-211ENST00000554310 OR10J6PQ8NGY7 276 aa9.37□□□□□ -0.91
SHMT2-211ENST00000554310 ZNF586Q9NXT0 402 aa9.37□□□□□ -0.91
SHMT2-211ENST00000554310 TRBV19A0A075B6N1 114 aa9.36□□□□□ -0.91
SHMT2-211ENST00000554310 C5orf52A6NGY3 159 aa9.36□□□□□ -0.91
SHMT2-211ENST00000554310 K7EN84 100 aa9.36□□□□□ -0.91
SHMT2-211ENST00000554310 PEX7O00628 323 aa9.36□□□□□ -0.91
SHMT2-211ENST00000554310 TYMSP04818 313 aa9.36□□□□□ -0.91
SHMT2-211ENST00000554310 S100A6P06703 90 aa9.36□□□□□ -0.91
SHMT2-211ENST00000554310 HIST1H1EP10412 219 aaKnown RBP9.36□□□□□ -0.91
SHMT2-211ENST00000554310 CDKN1BP46527 198 aa9.36□□□□□ -0.91
SHMT2-211ENST00000554310 EMP1P54849 157 aa9.36□□□□□ -0.91
SHMT2-211ENST00000554310 C12orf74Q32Q52 190 aa9.36□□□□□ -0.91
SHMT2-211ENST00000554310 TMEM256Q8N2U0 113 aa9.36□□□□□ -0.91
SHMT2-211ENST00000554310 MRPL53Q96EL3 112 aaKnown RBP9.36□□□□□ -0.91
SHMT2-211ENST00000554310 TRAV9-1A0A075B6T8 112 aa9.35□□□□□ -0.91
SHMT2-211ENST00000554310 GCGP01275 180 aa9.35□□□□□ -0.91
SHMT2-211ENST00000554310 S100A9P06702 114 aaKnown RBP9.35□□□□□ -0.91
SHMT2-211ENST00000554310 TSPOP30536 169 aa9.35□□□□□ -0.91
SHMT2-211ENST00000554310 OSTCQ9NRP0 149 aa9.35□□□□□ -0.91
SHMT2-211ENST00000554310 DKK2Q9UBU2 259 aa9.35□□□□□ -0.91
SHMT2-211ENST00000554310 EPDR1Q9UM22 224 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms