RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 FAM74A7A6NL05 159 aa8.47□□□□□ -1.05
TMEM253-202ENST00000553744 LYRM9A8MSI8 78 aa8.47□□□□□ -1.05
TMEM253-202ENST00000553744 UBE2G2P60604 165 aa8.47□□□□□ -1.05
TMEM253-202ENST00000553744 ZFP69Q49AA0 526 aa8.47□□□□□ -1.05
TMEM253-202ENST00000553744 SLC51BQ86UW2 128 aa8.47□□□□□ -1.05
TMEM253-202ENST00000553744 CCDC28AQ8IWP9 274 aa8.47□□□□□ -1.05
TMEM253-202ENST00000553744 C9orf62Q8N4C0 152 aa8.47□□□□□ -1.05
TMEM253-202ENST00000553744 MBD3L1Q8WWY6 194 aa8.47□□□□□ -1.05
TMEM253-202ENST00000553744 LINC00467Q9BRT7 94 aa8.47□□□□□ -1.05
TMEM253-202ENST00000553744 EPDR1Q9UM22 224 aa8.47□□□□□ -1.05
TMEM253-202ENST00000553744 K7EQM0 130 aa8.46□□□□□ -1.06
TMEM253-202ENST00000553744 EIF5AL1Q6IS14 154 aaKnown RBP8.46□□□□□ -1.06
TMEM253-202ENST00000553744 CYB561D1Q8N8Q1 229 aa8.46□□□□□ -1.06
TMEM253-202ENST00000553744 C2CD4CQ8TF44 421 aa8.46□□□□□ -1.06
TMEM253-202ENST00000553744 SFT2D1Q8WV19 159 aa8.46□□□□□ -1.06
TMEM253-202ENST00000553744 ATG101Q9BSB4 218 aa8.46□□□□□ -1.06
TMEM253-202ENST00000553744 NKX6-2Q9C056 277 aaPredicted RBP8.46□□□□□ -1.06
TMEM253-202ENST00000553744 TIMM8BQ9Y5J9 83 aaPredicted RBP8.46□□□□□ -1.06
TMEM253-202ENST00000553744 ALMS1Q8TCU4 4167 aa8.45□□□□□ -1.06
TMEM253-202ENST00000553744 DEFB131BA0A096LNP1 70 aa8.45□□□□□ -1.06
TMEM253-202ENST00000553744 LCE6AA0A183 80 aa8.45□□□□□ -1.06
TMEM253-202ENST00000553744 H2AFB1P0C5Y9 115 aa8.45□□□□□ -1.06
TMEM253-202ENST00000553744 RAB5CP51148 216 aa8.45□□□□□ -1.06
TMEM253-202ENST00000553744 DAD1P61803 113 aa8.45□□□□□ -1.06
TMEM253-202ENST00000553744 Q6AWC8 147 aa8.45□□□□□ -1.06
TMEM253-202ENST00000553744 Q6ZQT7 251 aa8.45□□□□□ -1.06
TMEM253-202ENST00000553744 EIF4E3Q8N5X7 224 aaKnown RBP8.45□□□□□ -1.06
TMEM253-202ENST00000553744 TMEM75Q8N9X5 138 aa8.45□□□□□ -1.06
TMEM253-202ENST00000553744 ZNF680Q8NEM1 530 aa8.45□□□□□ -1.06
TMEM253-202ENST00000553744 TVP23CQ96ET8 276 aa8.45□□□□□ -1.06
TMEM253-202ENST00000553744 ARL2-SNX15V9GYD0 113 aa8.45□□□□□ -1.06
TMEM253-202ENST00000553744 IGHV1OR15-1A0A075B7D0 117 aa8.44□□□□□ -1.06
TMEM253-202ENST00000553744 A0A1B0GV50 99 aa8.44□□□□□ -1.06
TMEM253-202ENST00000553744 FBLL1A6NHQ2 334 aaKnown RBP8.44□□□□□ -1.06
TMEM253-202ENST00000553744 CBY3A6NI87 242 aa8.44□□□□□ -1.06
TMEM253-202ENST00000553744 SNURFLB1AK76 121 aa8.44□□□□□ -1.06
TMEM253-202ENST00000553744 F6UZH7 168 aa8.44□□□□□ -1.06
TMEM253-202ENST00000553744 RGS13O14921 159 aa8.44□□□□□ -1.06
TMEM253-202ENST00000553744 IFNA7P01567 189 aa8.44□□□□□ -1.06
TMEM253-202ENST00000553744 IGLV2-11P01706 119 aa8.44□□□□□ -1.06
TMEM253-202ENST00000553744 SULT1A2P50226 295 aa8.44□□□□□ -1.06
TMEM253-202ENST00000553744 FLI1Q01543 452 aaPredicted RBP8.44□□□□□ -1.06
TMEM253-202ENST00000553744 ANXA2RQ3ZCQ2 193 aa8.44□□□□□ -1.06
TMEM253-202ENST00000553744 SGK494Q96LW2 274 aa8.44□□□□□ -1.06
TMEM253-202ENST00000553744 NDFIP1Q9BT67 221 aa8.44□□□□□ -1.06
TMEM253-202ENST00000553744 TREM1Q9NP99 234 aa8.44□□□□□ -1.06
TMEM253-202ENST00000553744 NOP10Q9NPE3 64 aaKnown RBP8.44□□□□□ -1.06
TMEM253-202ENST00000553744 PSG8Q9UQ74 426 aa8.44□□□□□ -1.06
TMEM253-202ENST00000553744 IGLL5B9A064 214 aa8.43□□□□□ -1.06
TMEM253-202ENST00000553744 PEX7O00628 323 aa8.43□□□□□ -1.06
TMEM253-202ENST00000553744 DEFB130BP0DP73 79 aa8.43□□□□□ -1.06
TMEM253-202ENST00000553744 DEFB130AP0DP74 79 aa8.43□□□□□ -1.06
TMEM253-202ENST00000553744 TCTAP57738 103 aa8.43□□□□□ -1.06
TMEM253-202ENST00000553744 CST9LP1Q5W188 147 aa8.43□□□□□ -1.06
TMEM253-202ENST00000553744 C11orf72Q8NBR9 251 aa8.43□□□□□ -1.06
TMEM253-202ENST00000553744 HIST1H2BAQ96A08 127 aa8.43□□□□□ -1.06
TMEM253-202ENST00000553744 TCEAL7Q9BRU2 100 aa8.43□□□□□ -1.06
TMEM253-202ENST00000553744 TRAV21A0A0B4J279 112 aa8.42□□□□□ -1.06
TMEM253-202ENST00000553744 PAGE4O60829 102 aa8.42□□□□□ -1.06
TMEM253-202ENST00000553744 ATP5G3P48201 142 aa8.42□□□□□ -1.06
TMEM253-202ENST00000553744 PPT1P50897 306 aa8.42□□□□□ -1.06
TMEM253-202ENST00000553744 NKX2-5P52952 324 aaPredicted RBP8.42□□□□□ -1.06
TMEM253-202ENST00000553744 DAZ2Q13117 558 aaKnown RBP8.42□□□□□ -1.06
TMEM253-202ENST00000553744 IBA57Q5T440 356 aaKnown RBP8.42□□□□□ -1.06
TMEM253-202ENST00000553744 PRNTQ86SH4 94 aa8.42□□□□□ -1.06
TMEM253-202ENST00000553744 LINC00479Q96M42 142 aa8.42□□□□□ -1.06
TMEM253-202ENST00000553744 GSN-AS1Q9NRJ2 163 aa8.42□□□□□ -1.06
TMEM253-202ENST00000553744 TP53TG3Q9ULZ0 132 aa8.42□□□□□ -1.06
TMEM253-202ENST00000553744 IGHV4-4A0A075B6R2 117 aa8.41□□□□□ -1.06
TMEM253-202ENST00000553744 TRAV1-1A0A0B4J248 108 aa8.41□□□□□ -1.06
TMEM253-202ENST00000553744 TRAV34A0A0B4J273 112 aa8.41□□□□□ -1.06
TMEM253-202ENST00000553744 HTN3P15516 51 aa8.41□□□□□ -1.06
TMEM253-202ENST00000553744 TCL1AP56279 114 aa8.41□□□□□ -1.06
TMEM253-202ENST00000553744 MUC21Q5SSG8 566 aa8.41□□□□□ -1.06
TMEM253-202ENST00000553744 FAM159AQ6UWV7 190 aa8.41□□□□□ -1.06
TMEM253-202ENST00000553744 Q86TA4 180 aa8.41□□□□□ -1.06
TMEM253-202ENST00000553744 LINC00612Q8N6U2 182 aa8.41□□□□□ -1.06
TMEM253-202ENST00000553744 LINC00476Q8WZB0 136 aa8.41□□□□□ -1.06
TMEM253-202ENST00000553744 C8orf49Q96NF6 230 aa8.41□□□□□ -1.06
TMEM253-202ENST00000553744 APLNQ9ULZ1 77 aa8.41□□□□□ -1.06
TMEM253-202ENST00000553744 TEX46H3BTG2 121 aa8.4□□□□□ -1.06
TMEM253-202ENST00000553744 GCGP01275 180 aa8.4□□□□□ -1.06
TMEM253-202ENST00000553744 ZNF415Q09FC8 603 aa8.4□□□□□ -1.06
TMEM253-202ENST00000553744 TDRG1Q3Y452 100 aa8.4□□□□□ -1.06
TMEM253-202ENST00000553744 SMUG1Q53HV7 270 aa8.4□□□□□ -1.06
TMEM253-202ENST00000553744 SAPCD1Q5SSQ6 148 aa8.4□□□□□ -1.06
TMEM253-202ENST00000553744 FMC1Q96HJ9 113 aa8.4□□□□□ -1.06
TMEM253-202ENST00000553744 FAM210BQ96KR6 192 aa8.4□□□□□ -1.06
TMEM253-202ENST00000553744 MANBALQ9NQG1 85 aa8.4□□□□□ -1.06
TMEM253-202ENST00000553744 NAGKQ9UJ70 344 aa8.4□□□□□ -1.06
TMEM253-202ENST00000553744 KLF12Q9Y4X4 402 aa8.4□□□□□ -1.06
TMEM253-202ENST00000553744 TRGV11A0A075B6L2 103 aa8.39□□□□□ -1.07
TMEM253-202ENST00000553744 ATP5G1P05496 136 aa8.39□□□□□ -1.07
TMEM253-202ENST00000553744 PFN1P07737 140 aaKnown RBP8.39□□□□□ -1.07
TMEM253-202ENST00000553744 ZNF80P51504 273 aaPredicted RBP8.39□□□□□ -1.07
TMEM253-202ENST00000553744 CCL20P78556 96 aa8.39□□□□□ -1.07
TMEM253-202ENST00000553744 Q6ZTI0 123 aa8.39□□□□□ -1.07
TMEM253-202ENST00000553744 GNG13Q9P2W3 67 aa8.39□□□□□ -1.07
TMEM253-202ENST00000553744 TRGV1A0A0A0MS02 117 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 TRBV6-1A0A0K0K1D8 114 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms