RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 CARHSP1Q9Y2V2 147 aaKnown RBP3.76□□□□□ -1.81
VTI1B-202ENST00000553619 KLF12Q9Y4X4 402 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 LENEPQ9Y5L5 61 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 HIVEP1P15822 2718 aa3.76□□□□□ -1.81
VTI1B-202ENST00000553619 WNK1Q9H4A3 2382 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 TRBV7-9A0A0J9YWB2 115 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 GGTLC3B5MD39 225 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 M0R036 132 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 PPP1R2P9O14990 202 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 IGLV1-51P01701 117 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 MT-ND4LP03901 98 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 LINC00614P0C842 121 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 TSPOP30536 169 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 RPL35P42766 123 aaKnown RBP3.75□□□□□ -1.81
VTI1B-202ENST00000553619 TFPI2P48307 235 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 GNG4P50150 75 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 GUCA2BQ16661 112 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 C9orf47Q6ZRZ4 202 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 GOLT1AQ6ZVE7 132 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 SMIM15Q7Z3B0 74 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 C2CD4CQ8TF44 421 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 DCANP1Q8TF63 244 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 FAM110AQ9BQ89 295 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 PSG8Q9UQ74 426 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 CSMD2Q7Z408 3487 aa3.75□□□□□ -1.81
VTI1B-202ENST00000553619 MAP1AP78559 2803 aaPredicted RBP3.75□□□□□ -1.81
VTI1B-202ENST00000553619 CSMD1Q96PZ7 3565 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 TRAV8-2A0A0B4J237 113 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 ZNF705FA8MVS1 300 aaPredicted RBP3.74□□□□□ -1.81
VTI1B-202ENST00000553619 OR11H12B2RN74 326 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 C9JQL5 133 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 M0R3E3 92 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 SLC17A3O00476 420 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 SOCS3O14543 225 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 CT45A10P0DMU9 189 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 ZNF138P52744 262 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 NUTF2P61970 127 aaKnown RBP3.74□□□□□ -1.81
VTI1B-202ENST00000553619 GNG5P63218 68 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 RPL19P84098 196 aaKnown RBP3.74□□□□□ -1.81
VTI1B-202ENST00000553619 RHEBQ15382 184 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 PSMG4Q5JS54 123 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 ADAMTSL5Q6ZMM2 481 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 FOXI2Q6ZQN5 318 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 PRNTQ86SH4 94 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 TMEM183AQ8IXX5 376 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 TMEM61Q8N0U2 210 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 C15orf54Q8N8G6 183 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 OR8A1Q8NGG7 326 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 OCC1Q8TAD7 63 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 ASCL2Q99929 193 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 C2orf88Q9BSF0 95 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 C1orf43Q9BWL3 253 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 CTDSP1Q9GZU7 261 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 FBN3Q75N90 2809 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 ZANQ9Y493 2812 aa3.74□□□□□ -1.81
VTI1B-202ENST00000553619 A0A087WWC5 75 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 TRAV34A0A0B4J273 112 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 XKRY2A2RUG3 117 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 FABP5P3A8MUU1 101 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 TCAPO15273 167 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 GCGP01275 180 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 LTAP01374 205 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 AMBPP02760 352 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 NPSP0C0P6 89 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 ZNF688P0C7X2 276 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 MGST1P10620 155 aaKnown RBP3.73□□□□□ -1.81
VTI1B-202ENST00000553619 EDN2P20800 178 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 HLA-DMBP28068 263 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 LEPP41159 167 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 DEFB131AP59861 70 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 RPL23P62829 140 aaKnown RBP3.73□□□□□ -1.81
VTI1B-202ENST00000553619 HIST1H1AQ02539 215 aaPredicted RBP3.73□□□□□ -1.81
VTI1B-202ENST00000553619 GAGE1Q13065 139 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 BTN1A1Q13410 526 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 ADIRFQ15847 76 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 CENPWQ5EE01 88 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 HIST2H2BDQ6DRA6 164 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 GTSCR1Q86UQ5 136 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 STHQ8IWL8 128 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 RNF182Q8N6D2 247 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 BTF3L4Q96K17 158 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 ODF3Q96PU9 254 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 PRR25Q96S07 402 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 AGPAT4-IT1Q9H0P7 198 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 RPS10P5Q9NQ39 176 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 OSTCQ9NRP0 149 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 TMEM242Q9NWH2 141 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 ZNF492Q9P255 531 aa3.73□□□□□ -1.81
VTI1B-202ENST00000553619 IGKV2-40A0A087WW87 121 aaPredicted RBP3.72□□□□□ -1.81
VTI1B-202ENST00000553619 A0A0J9YX75 114 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 A0A1W2PPQ1 181 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 C7orf77A4D0Y5 90 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 CXorf65A6NEN9 183 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 IGKV2D-40P01614 121 aaPredicted RBP3.72□□□□□ -1.81
VTI1B-202ENST00000553619 GPX1P07203 203 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 ADCYAP1P18509 176 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 ERVFC1-1P60608 527 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 RPS20P60866 119 aaKnown RBP3.72□□□□□ -1.81
VTI1B-202ENST00000553619 RAB5BP61020 215 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 ERCC8Q13216 396 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms