RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 IFNA7P01567 189 aa16.26■□□□□ 0.19
TDP1-206ENST00000553569 SLC51BQ86UW2 128 aa16.26■□□□□ 0.19
TDP1-206ENST00000553569 C2CD4CQ8TF44 421 aa16.26■□□□□ 0.19
TDP1-206ENST00000553569 DEFB131BA0A096LNP1 70 aa16.25■□□□□ 0.19
TDP1-206ENST00000553569 LYRM9A8MSI8 78 aa16.25■□□□□ 0.19
TDP1-206ENST00000553569 F6UZH7 168 aa16.25■□□□□ 0.19
TDP1-206ENST00000553569 RGS13O14921 159 aa16.25■□□□□ 0.19
TDP1-206ENST00000553569 EIF5AL1Q6IS14 154 aaKnown RBP16.25■□□□□ 0.19
TDP1-206ENST00000553569 CYB561D1Q8N8Q1 229 aa16.25■□□□□ 0.19
TDP1-206ENST00000553569 MBD3L1Q8WWY6 194 aa16.25■□□□□ 0.19
TDP1-206ENST00000553569 ATG101Q9BSB4 218 aa16.25■□□□□ 0.19
TDP1-206ENST00000553569 TENM2Q9NT68 2774 aa16.24■□□□□ 0.19
TDP1-206ENST00000553569 CBY3A6NI87 242 aa16.24■□□□□ 0.19
TDP1-206ENST00000553569 H2AFB1P0C5Y9 115 aa16.24■□□□□ 0.19
TDP1-206ENST00000553569 HTN3P15516 51 aa16.24■□□□□ 0.19
TDP1-206ENST00000553569 NOP10Q9NPE3 64 aaKnown RBP16.24■□□□□ 0.19
TDP1-206ENST00000553569 TIMM8BQ9Y5J9 83 aaPredicted RBP16.24■□□□□ 0.19
TDP1-206ENST00000553569 LCE6AA0A183 80 aa16.23■□□□□ 0.19
TDP1-206ENST00000553569 IGLL5B9A064 214 aa16.23■□□□□ 0.19
TDP1-206ENST00000553569 DEFB130BP0DP73 79 aa16.23■□□□□ 0.19
TDP1-206ENST00000553569 DEFB130AP0DP74 79 aa16.23■□□□□ 0.19
TDP1-206ENST00000553569 CST9LP1Q5W188 147 aa16.23■□□□□ 0.19
TDP1-206ENST00000553569 EIF4E3Q8N5X7 224 aaKnown RBP16.23■□□□□ 0.19
TDP1-206ENST00000553569 TVP23CQ96ET8 276 aa16.23■□□□□ 0.19
TDP1-206ENST00000553569 NDFIP1Q9BT67 221 aa16.23■□□□□ 0.19
TDP1-206ENST00000553569 TREM1Q9NP99 234 aa16.23■□□□□ 0.19
TDP1-206ENST00000553569 PSG8Q9UQ74 426 aa16.23■□□□□ 0.19
TDP1-206ENST00000553569 KMT2CQ8NEZ4 4911 aaKnown RBP16.23■□□□□ 0.19
TDP1-206ENST00000553569 IGHV1OR15-1A0A075B7D0 117 aa16.22■□□□□ 0.19
TDP1-206ENST00000553569 SNURFLB1AK76 121 aa16.22■□□□□ 0.19
TDP1-206ENST00000553569 PEX7O00628 323 aa16.22■□□□□ 0.19
TDP1-206ENST00000553569 NKX2-5P52952 324 aaPredicted RBP16.22■□□□□ 0.19
TDP1-206ENST00000553569 MUC21Q5SSG8 566 aa16.22■□□□□ 0.19
TDP1-206ENST00000553569 PRNTQ86SH4 94 aa16.22■□□□□ 0.19
TDP1-206ENST00000553569 LINC00467Q9BRT7 94 aa16.22■□□□□ 0.19
TDP1-206ENST00000553569 NKX6-2Q9C056 277 aaPredicted RBP16.22■□□□□ 0.19
TDP1-206ENST00000553569 TRAV34A0A0B4J273 112 aa16.21■□□□□ 0.19
TDP1-206ENST00000553569 FLI1Q01543 452 aaPredicted RBP16.21■□□□□ 0.19
TDP1-206ENST00000553569 Q6AWC8 147 aa16.21■□□□□ 0.19
TDP1-206ENST00000553569 TMEM75Q8N9X5 138 aa16.21■□□□□ 0.19
TDP1-206ENST00000553569 ZNF680Q8NEM1 530 aa16.21■□□□□ 0.19
TDP1-206ENST00000553569 PAGE4O60829 102 aa16.2■□□□□ 0.18
TDP1-206ENST00000553569 IGLV2-11P01706 119 aa16.2■□□□□ 0.18
TDP1-206ENST00000553569 ATP5G3P48201 142 aa16.2■□□□□ 0.18
TDP1-206ENST00000553569 SULT1A2P50226 295 aa16.2■□□□□ 0.18
TDP1-206ENST00000553569 RAB5CP51148 216 aa16.2■□□□□ 0.18
TDP1-206ENST00000553569 LINC00479Q96M42 142 aa16.2■□□□□ 0.18
TDP1-206ENST00000553569 C8orf49Q96NF6 230 aa16.2■□□□□ 0.18
TDP1-206ENST00000553569 GSN-AS1Q9NRJ2 163 aa16.2■□□□□ 0.18
TDP1-206ENST00000553569 NAGKQ9UJ70 344 aa16.2■□□□□ 0.18
TDP1-206ENST00000553569 TP53TG3Q9ULZ0 132 aa16.2■□□□□ 0.18
TDP1-206ENST00000553569 ANXA2RQ3ZCQ2 193 aa16.19■□□□□ 0.18
TDP1-206ENST00000553569 DYNC2H1Q8NCM8 4307 aaKnown RBP16.18■□□□□ 0.18
TDP1-206ENST00000553569 IGHV4-4A0A075B6R2 117 aa16.18■□□□□ 0.18
TDP1-206ENST00000553569 PPT1P50897 306 aa16.18■□□□□ 0.18
TDP1-206ENST00000553569 C11orf72Q8NBR9 251 aa16.18■□□□□ 0.18
TDP1-206ENST00000553569 HIST1H2BAQ96A08 127 aa16.18■□□□□ 0.18
TDP1-206ENST00000553569 ARL2-SNX15V9GYD0 113 aa16.18■□□□□ 0.18
TDP1-206ENST00000553569 TRAV21A0A0B4J279 112 aa16.17■□□□□ 0.18
TDP1-206ENST00000553569 FBLL1A6NHQ2 334 aaKnown RBP16.17■□□□□ 0.18
TDP1-206ENST00000553569 GAGE12BA1L429 117 aa16.16■□□□□ 0.18
TDP1-206ENST00000553569 GAGE7O76087 117 aa16.16■□□□□ 0.18
TDP1-206ENST00000553569 GAGE12FP0CL80 117 aa16.16■□□□□ 0.18
TDP1-206ENST00000553569 GAGE12GP0CL81 117 aa16.16■□□□□ 0.18
TDP1-206ENST00000553569 GAGE12IP0CL82 117 aa16.16■□□□□ 0.18
TDP1-206ENST00000553569 FAM159AQ6UWV7 190 aa16.16■□□□□ 0.18
TDP1-206ENST00000553569 Q86TA4 180 aa16.16■□□□□ 0.18
TDP1-206ENST00000553569 LINC00476Q8WZB0 136 aa16.16■□□□□ 0.18
TDP1-206ENST00000553569 KLF12Q9Y4X4 402 aa16.16■□□□□ 0.18
TDP1-206ENST00000553569 LY6G6CO95867 125 aa16.15■□□□□ 0.18
TDP1-206ENST00000553569 TCL1AP56279 114 aa16.15■□□□□ 0.18
TDP1-206ENST00000553569 ZNF415Q09FC8 603 aa16.15■□□□□ 0.18
TDP1-206ENST00000553569 IBA57Q5T440 356 aaKnown RBP16.15■□□□□ 0.18
TDP1-206ENST00000553569 APLNQ9ULZ1 77 aa16.15■□□□□ 0.18
TDP1-206ENST00000553569 GCGP01275 180 aa16.14■□□□□ 0.17
TDP1-206ENST00000553569 ZNF80P51504 273 aaPredicted RBP16.14■□□□□ 0.17
TDP1-206ENST00000553569 CCL20P78556 96 aa16.14■□□□□ 0.17
TDP1-206ENST00000553569 DAZ2Q13117 558 aaKnown RBP16.14■□□□□ 0.17
TDP1-206ENST00000553569 TMEM183BQ1AE95 376 aa16.14■□□□□ 0.17
TDP1-206ENST00000553569 SMUG1Q53HV7 270 aa16.14■□□□□ 0.17
TDP1-206ENST00000553569 Q6ZTI0 123 aa16.14■□□□□ 0.17
TDP1-206ENST00000553569 TMEM183AQ8IXX5 376 aa16.14■□□□□ 0.17
TDP1-206ENST00000553569 TCEAL7Q9BRU2 100 aa16.14■□□□□ 0.17
TDP1-206ENST00000553569 GNG13Q9P2W3 67 aa16.14■□□□□ 0.17
TDP1-206ENST00000553569 BOLA1Q9Y3E2 137 aa16.14■□□□□ 0.17
TDP1-206ENST00000553569 PLECQ15149 4684 aaKnown RBP16.14■□□□□ 0.17
TDP1-206ENST00000553569 TRAV1-1A0A0B4J248 108 aa16.13■□□□□ 0.17
TDP1-206ENST00000553569 TEX46H3BTG2 121 aa16.13■□□□□ 0.17
TDP1-206ENST00000553569 AKR1C3P42330 323 aa16.13■□□□□ 0.17
TDP1-206ENST00000553569 TCTAP57738 103 aa16.13■□□□□ 0.17
TDP1-206ENST00000553569 UBE2G1P62253 170 aa16.13■□□□□ 0.17
TDP1-206ENST00000553569 SAPCD1Q5SSQ6 148 aa16.13■□□□□ 0.17
TDP1-206ENST00000553569 ALKAL2Q6UX46 152 aa16.13■□□□□ 0.17
TDP1-206ENST00000553569 LINC00612Q8N6U2 182 aa16.13■□□□□ 0.17
TDP1-206ENST00000553569 ALMS1Q8TCU4 4167 aa16.13■□□□□ 0.17
TDP1-206ENST00000553569 TRGV11A0A075B6L2 103 aa16.12■□□□□ 0.17
TDP1-206ENST00000553569 TRGV1A0A0A0MS02 117 aa16.12■□□□□ 0.17
TDP1-206ENST00000553569 SCO2A0A1W2PP80 73 aa16.12■□□□□ 0.17
TDP1-206ENST00000553569 F5H768 121 aa16.12■□□□□ 0.17
TDP1-206ENST00000553569 ATP5G1P05496 136 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms