RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 HIST1H2BJP06899 126 aa14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 HIST1H2BOP23527 126 aa14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 HIST1H2BBP33778 126 aa14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 FOXA3P55318 350 aaPredicted RBP14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 HIST1H2BDP58876 126 aa14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 HIST1H2BCP62807 126 aa14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 HIST2H2BEQ16778 126 aa14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 DEFB114Q30KQ6 69 aa14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 PSMG4Q5JS54 123 aa14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 HIST1H2BHQ93079 126 aa14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 FAM19A4Q96LR4 140 aa14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 HIST1H2BNQ99877 126 aa14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 HIST1H2BMQ99879 126 aa14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 PAFAH1B2P68402 229 aa14.63□□□□□ -0.07
RBFOX1-215ENST00000553186 FABP9Q0Z7S8 132 aa14.63□□□□□ -0.07
RBFOX1-215ENST00000553186 MRPL54Q6P161 138 aaKnown RBP14.63□□□□□ -0.07
RBFOX1-215ENST00000553186 ZNF575Q86XF7 245 aa14.63□□□□□ -0.07
RBFOX1-215ENST00000553186 A0A1B0GUS0 222 aa14.63□□□□□ -0.07
RBFOX1-215ENST00000553186 FABP5P3A8MUU1 101 aa14.63□□□□□ -0.07
RBFOX1-215ENST00000553186 WNK1Q9H4A3 2382 aa14.62□□□□□ -0.07
RBFOX1-215ENST00000553186 TRGC1P0CF51 173 aa14.62□□□□□ -0.07
RBFOX1-215ENST00000553186 SMIM6P0DI80 62 aa14.62□□□□□ -0.07
RBFOX1-215ENST00000553186 NSUN5P1Q3KNT7 163 aa14.62□□□□□ -0.07
RBFOX1-215ENST00000553186 GDF5OSQ5U4N7 250 aa14.62□□□□□ -0.07
RBFOX1-215ENST00000553186 ZFAND2AQ8N6M9 145 aa14.62□□□□□ -0.07
RBFOX1-215ENST00000553186 DYNLRB2Q8TF09 96 aa14.62□□□□□ -0.07
RBFOX1-215ENST00000553186 SIGLEC8Q9NYZ4 499 aa14.62□□□□□ -0.07
RBFOX1-215ENST00000553186 TRAPPC1Q9Y5R8 145 aa14.62□□□□□ -0.07
RBFOX1-215ENST00000553186 S100A8P05109 93 aa14.61□□□□□ -0.07
RBFOX1-215ENST00000553186 PRR9Q5T870 116 aa14.61□□□□□ -0.07
RBFOX1-215ENST00000553186 RBPMS2Q6ZRY4 209 aaKnown RBP14.61□□□□□ -0.07
RBFOX1-215ENST00000553186 NDUFA11Q86Y39 141 aa14.61□□□□□ -0.07
RBFOX1-215ENST00000553186 TRAV2A0A0B4J234 112 aa14.61□□□□□ -0.07
RBFOX1-215ENST00000553186 TMEM189A5PLL7 270 aa14.61□□□□□ -0.07
RBFOX1-215ENST00000553186 PGLYRP4Q96LB8 373 aa14.61□□□□□ -0.07
RBFOX1-215ENST00000553186 GNB1LQ9BYB4 327 aa14.61□□□□□ -0.07
RBFOX1-215ENST00000553186 CD300EQ496F6 205 aaPredicted RBP14.6□□□□□ -0.07
RBFOX1-215ENST00000553186 JMJD1CQ15652 2540 aa14.6□□□□□ -0.07
RBFOX1-215ENST00000553186 TRBV7-9A0A0J9YWB2 115 aa14.6□□□□□ -0.07
RBFOX1-215ENST00000553186 A0A1B0GXF2 115 aa14.6□□□□□ -0.07
RBFOX1-215ENST00000553186 RASL11AQ6T310 242 aa14.6□□□□□ -0.07
RBFOX1-215ENST00000553186 TMEM136Q6ZRR5 245 aa14.6□□□□□ -0.07
RBFOX1-215ENST00000553186 TMSB15BA0A087X1C1 80 aa14.59□□□□□ -0.07
RBFOX1-215ENST00000553186 SNURFLB1AK76 121 aa14.59□□□□□ -0.07
RBFOX1-215ENST00000553186 Q6ZQT7 251 aa14.59□□□□□ -0.07
RBFOX1-215ENST00000553186 ATP5L2Q7Z4Y8 100 aa14.59□□□□□ -0.07
RBFOX1-215ENST00000553186 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.59□□□□□ -0.07
RBFOX1-215ENST00000553186 C11orf21Q9P2W6 132 aa14.59□□□□□ -0.07
RBFOX1-215ENST00000553186 A0A0J9YX75 114 aa14.58□□□□□ -0.07
RBFOX1-215ENST00000553186 CRISP2P16562 243 aa14.58□□□□□ -0.07
RBFOX1-215ENST00000553186 LINC01559Q495D7 138 aa14.58□□□□□ -0.07
RBFOX1-215ENST00000553186 APRG1Q8IVJ8 170 aa14.58□□□□□ -0.07
RBFOX1-215ENST00000553186 CD33P20138 364 aa14.58□□□□□ -0.08
RBFOX1-215ENST00000553186 COX19Q49B96 90 aa14.58□□□□□ -0.08
RBFOX1-215ENST00000553186 WDR73Q6P4I2 378 aa14.58□□□□□ -0.08
RBFOX1-215ENST00000553186 ORM1P02763 201 aa14.57□□□□□ -0.08
RBFOX1-215ENST00000553186 MRPL18Q9H0U6 180 aaKnown RBP14.57□□□□□ -0.08
RBFOX1-215ENST00000553186 SORL1Q92673 2214 aa14.57□□□□□ -0.08
RBFOX1-215ENST00000553186 IGKV3D-20A0A0C4DH25 116 aa14.57□□□□□ -0.08
RBFOX1-215ENST00000553186 XKRY2A2RUG3 117 aa14.57□□□□□ -0.08
RBFOX1-215ENST00000553186 MT-ND6P03923 174 aa14.56□□□□□ -0.08
RBFOX1-215ENST00000553186 RPS20P60866 119 aaKnown RBP14.56□□□□□ -0.08
RBFOX1-215ENST00000553186 KIR3DS1Q14943 382 aa14.56□□□□□ -0.08
RBFOX1-215ENST00000553186 Q6AWC8 147 aa14.56□□□□□ -0.08
RBFOX1-215ENST00000553186 SPAG8Q99932 426 aaPredicted RBP14.56□□□□□ -0.08
RBFOX1-215ENST00000553186 ZNF256Q9Y2P7 627 aaPredicted RBP14.56□□□□□ -0.08
RBFOX1-215ENST00000553186 TRAV25A0A0B4J276 109 aa14.56□□□□□ -0.08
RBFOX1-215ENST00000553186 LINC00587B1AMM8 73 aa14.56□□□□□ -0.08
RBFOX1-215ENST00000553186 J3KRW8 73 aa14.56□□□□□ -0.08
RBFOX1-215ENST00000553186 GSN-AS1Q9NRJ2 163 aa14.56□□□□□ -0.08
RBFOX1-215ENST00000553186 KLLNB2CW77 178 aa14.55□□□□□ -0.08
RBFOX1-215ENST00000553186 EBLN2Q6P2I7 272 aa14.55□□□□□ -0.08
RBFOX1-215ENST00000553186 FOXI2Q6ZQN5 318 aa14.55□□□□□ -0.08
RBFOX1-215ENST00000553186 NIT2Q9NQR4 276 aa14.55□□□□□ -0.08
RBFOX1-215ENST00000553186 HLA-DQA1P01909 254 aa14.54□□□□□ -0.08
RBFOX1-215ENST00000553186 GPX1P07203 203 aa14.54□□□□□ -0.08
RBFOX1-215ENST00000553186 CAMPP49913 170 aa14.54□□□□□ -0.08
RBFOX1-215ENST00000553186 DEFB131AP59861 70 aa14.54□□□□□ -0.08
RBFOX1-215ENST00000553186 RAB4BP61018 213 aa14.54□□□□□ -0.08
RBFOX1-215ENST00000553186 HBBP68871 147 aa14.54□□□□□ -0.08
RBFOX1-215ENST00000553186 ODF3Q96PU9 254 aa14.54□□□□□ -0.08
RBFOX1-215ENST00000553186 A0A1B0GUT8 65 aa14.54□□□□□ -0.08
RBFOX1-215ENST00000553186 ARMS2P0C7Q2 107 aa14.54□□□□□ -0.08
RBFOX1-215ENST00000553186 IGLC6P0CF74 106 aa14.54□□□□□ -0.08
RBFOX1-215ENST00000553186 NDUFA6P56556 154 aa14.53□□□□□ -0.08
RBFOX1-215ENST00000553186 LYZL1Q6UWQ5 148 aa14.53□□□□□ -0.08
RBFOX1-215ENST00000553186 TENM1Q9UKZ4 2725 aa14.53□□□□□ -0.08
RBFOX1-215ENST00000553186 TPPP3Q9BW30 176 aa14.53□□□□□ -0.08
RBFOX1-215ENST00000553186 TEP1Q99973 2627 aaKnown RBP14.52□□□□□ -0.08
RBFOX1-215ENST00000553186 TRAV21A0A0B4J279 112 aa14.52□□□□□ -0.08
RBFOX1-215ENST00000553186 GRIFINA4D1Z8 144 aa14.52□□□□□ -0.08
RBFOX1-215ENST00000553186 OR4C46A6NHA9 309 aa14.52□□□□□ -0.08
RBFOX1-215ENST00000553186 RNASE4P34096 147 aaKnown RBP14.52□□□□□ -0.08
RBFOX1-215ENST00000553186 CTRLP40313 264 aa14.52□□□□□ -0.08
RBFOX1-215ENST00000553186 SLAQ13239 276 aa14.52□□□□□ -0.08
RBFOX1-215ENST00000553186 MAP6D1Q9H9H5 199 aa14.52□□□□□ -0.08
RBFOX1-215ENST00000553186 SAP30O75446 220 aa14.51□□□□□ -0.09
RBFOX1-215ENST00000553186 DUSP14O95147 198 aaKnown RBP14.51□□□□□ -0.09
RBFOX1-215ENST00000553186 FER1L6-AS1Q8NA97 138 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms