RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 RPH3ALQ9UNE2 315 aa7.41□□□□□ -1.22
TRAFD1-208ENST00000552890 TRGV11A0A075B6L2 103 aa7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 TRAV12-3A0A0B4J271 114 aa7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 TRBV6-1A0A0K0K1D8 114 aa7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 PEX7O00628 323 aa7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 HTN1P15515 57 aa7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 DAD1P61803 113 aa7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 DAZ2Q13117 558 aaKnown RBP7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 ERCC8Q13216 396 aa7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 ZNF726P1Q15940 193 aa7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 Q6AWC8 147 aa7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 C2CD4CQ8TF44 421 aa7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 PHLDA1Q8WV24 401 aaPredicted RBP7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 SPXQ9BT56 116 aa7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 BIN3Q9NQY0 253 aa7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 DKK2Q9UBU2 259 aa7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 PSG8Q9UQ74 426 aa7.4□□□□□ -1.22
TRAFD1-208ENST00000552890 IGHV1OR15-1A0A075B7D0 117 aa7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 CBY3A6NI87 242 aa7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 GGTLC3B5MD39 225 aa7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 ZNF324O75467 553 aaPredicted RBP7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 RBMY1A1P0DJD3 496 aaKnown RBP7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 RBMY1CP0DJD4 496 aa7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 EMP1P54849 157 aa7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 FGF8P55075 233 aaPredicted RBP7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 ZNF415Q09FC8 603 aa7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 RBMY1FQ15415 496 aaKnown RBP7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 LGALS9BQ3B8N2 356 aa7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 TDRG1Q3Y452 100 aa7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 ZFAND2AQ8N6M9 145 aa7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 NDUFAF3Q9BU61 184 aa7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 TMPRSS5Q9H3S3 457 aa7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 TP53TG3Q9ULZ0 132 aa7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 KLF12Q9Y4X4 402 aa7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 YTHDF2Q9Y5A9 579 aaKnown RBP7.39□□□□□ -1.23
TRAFD1-208ENST00000552890 ZNF705GA8MUZ8 300 aaPredicted RBP7.38□□□□□ -1.23
TRAFD1-208ENST00000552890 CIDEAO60543 219 aa7.38□□□□□ -1.23
TRAFD1-208ENST00000552890 PAGE4O60829 102 aa7.38□□□□□ -1.23
TRAFD1-208ENST00000552890 NDUFS6O75380 124 aaKnown RBP7.38□□□□□ -1.23
TRAFD1-208ENST00000552890 PFN1P07737 140 aaKnown RBP7.38□□□□□ -1.23
TRAFD1-208ENST00000552890 AKR1C3P42330 323 aa7.38□□□□□ -1.23
TRAFD1-208ENST00000552890 UBE2G2P60604 165 aa7.38□□□□□ -1.23
TRAFD1-208ENST00000552890 SLAQ13239 276 aa7.38□□□□□ -1.23
TRAFD1-208ENST00000552890 FAM222AQ5U5X8 452 aa7.38□□□□□ -1.23
TRAFD1-208ENST00000552890 DMRTA1Q5VZB9 504 aa7.38□□□□□ -1.23
TRAFD1-208ENST00000552890 RNASE8Q8TDE3 154 aaKnown RBP7.38□□□□□ -1.23
TRAFD1-208ENST00000552890 SMIM12Q96EX1 92 aa7.38□□□□□ -1.23
TRAFD1-208ENST00000552890 SDF2L1Q9HCN8 221 aa7.38□□□□□ -1.23
TRAFD1-208ENST00000552890 FABP5P3A8MUU1 101 aa7.37□□□□□ -1.23
TRAFD1-208ENST00000552890 J3KRW8 73 aa7.37□□□□□ -1.23
TRAFD1-208ENST00000552890 ATP5G1P05496 136 aa7.37□□□□□ -1.23
TRAFD1-208ENST00000552890 ATP5G3P48201 142 aa7.37□□□□□ -1.23
TRAFD1-208ENST00000552890 TMEM183BQ1AE95 376 aa7.37□□□□□ -1.23
TRAFD1-208ENST00000552890 SSX7Q7RTT5 188 aa7.37□□□□□ -1.23
TRAFD1-208ENST00000552890 COX8CQ7Z4L0 72 aa7.37□□□□□ -1.23
TRAFD1-208ENST00000552890 PRNTQ86SH4 94 aa7.37□□□□□ -1.23
TRAFD1-208ENST00000552890 GNG13Q9P2W3 67 aa7.37□□□□□ -1.23
TRAFD1-208ENST00000552890 VAX2Q9UIW0 290 aa7.37□□□□□ -1.23
TRAFD1-208ENST00000552890 DNAH9Q9NYC9 4486 aa7.37□□□□□ -1.23
TRAFD1-208ENST00000552890 DEFB131BA0A096LNP1 70 aa7.36□□□□□ -1.23
TRAFD1-208ENST00000552890 DEFB4AO15263 64 aa7.36□□□□□ -1.23
TRAFD1-208ENST00000552890 NANOS2P60321 138 aaKnown RBP7.36□□□□□ -1.23
TRAFD1-208ENST00000552890 MEF2BQ02080 365 aaPredicted RBP7.36□□□□□ -1.23
TRAFD1-208ENST00000552890 CD300CQ08708 224 aa7.36□□□□□ -1.23
TRAFD1-208ENST00000552890 BTN1A1Q13410 526 aa7.36□□□□□ -1.23
TRAFD1-208ENST00000552890 FAM162BQ5T6X4 162 aa7.36□□□□□ -1.23
TRAFD1-208ENST00000552890 C15orf53Q8NAA6 179 aa7.36□□□□□ -1.23
TRAFD1-208ENST00000552890 Q8TAT8 98 aa7.36□□□□□ -1.23
TRAFD1-208ENST00000552890 C18orf15Q96N68 181 aa7.36□□□□□ -1.23
TRAFD1-208ENST00000552890 A0A1B0GVG6 124 aa7.35□□□□□ -1.23
TRAFD1-208ENST00000552890 GCGP01275 180 aa7.35□□□□□ -1.23
TRAFD1-208ENST00000552890 TCL1AP56279 114 aa7.35□□□□□ -1.23
TRAFD1-208ENST00000552890 GNG5P63218 68 aa7.35□□□□□ -1.23
TRAFD1-208ENST00000552890 C12orf74Q32Q52 190 aa7.35□□□□□ -1.23
TRAFD1-208ENST00000552890 PIK3CD-AS1Q5SR53 167 aa7.35□□□□□ -1.23
TRAFD1-208ENST00000552890 ZFAND6Q6FIF0 208 aa7.35□□□□□ -1.23
TRAFD1-208ENST00000552890 NOP10Q9NPE3 64 aaKnown RBP7.35□□□□□ -1.23
TRAFD1-208ENST00000552890 TRGV2A0A075B6R0 118 aa7.34□□□□□ -1.23
TRAFD1-208ENST00000552890 TRAV8-1A0A0A6YYK1 113 aa7.34□□□□□ -1.23
TRAFD1-208ENST00000552890 XKRY2A2RUG3 117 aa7.34□□□□□ -1.23
TRAFD1-208ENST00000552890 TMEM250H0YL14 139 aa7.34□□□□□ -1.23
TRAFD1-208ENST00000552890 EIF3GO75821 320 aaKnown RBP eCLIP7.34□□□□□ -1.23
TRAFD1-208ENST00000552890 LTAP01374 205 aa7.34□□□□□ -1.23
TRAFD1-208ENST00000552890 BCL2P10415 239 aa7.34□□□□□ -1.23
TRAFD1-208ENST00000552890 ALKAL2Q6UX46 152 aa7.34□□□□□ -1.23
TRAFD1-208ENST00000552890 Q6ZTC4 211 aa7.34□□□□□ -1.23
TRAFD1-208ENST00000552890 Q86TA4 180 aa7.34□□□□□ -1.23
TRAFD1-208ENST00000552890 TMEM183AQ8IXX5 376 aa7.34□□□□□ -1.23
TRAFD1-208ENST00000552890 C11orf52Q96A22 123 aa7.34□□□□□ -1.23
TRAFD1-208ENST00000552890 SMDT1Q9H4I9 107 aa7.34□□□□□ -1.23
TRAFD1-208ENST00000552890 H3BNG1 76 aa7.33□□□□□ -1.24
TRAFD1-208ENST00000552890 M0R2P5 195 aa7.33□□□□□ -1.24
TRAFD1-208ENST00000552890 IGLV2-11P01706 119 aa7.33□□□□□ -1.24
TRAFD1-208ENST00000552890 DEFB130BP0DP73 79 aa7.33□□□□□ -1.24
TRAFD1-208ENST00000552890 DEFB130AP0DP74 79 aa7.33□□□□□ -1.24
TRAFD1-208ENST00000552890 S100A4P26447 101 aaKnown RBP7.33□□□□□ -1.24
TRAFD1-208ENST00000552890 RAB14P61106 215 aa7.33□□□□□ -1.24
TRAFD1-208ENST00000552890 BAGE2Q86Y30 109 aa7.33□□□□□ -1.24
TRAFD1-208ENST00000552890 LYPD6BQ8NI32 183 aa7.33□□□□□ -1.24
TRAFD1-208ENST00000552890 DAZAP1Q96EP5 407 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms