RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 K7EPK0 472 aa3.78□□□□□ -1.8
CHPT1-209ENST00000552329 RLN2P04090 185 aa3.78□□□□□ -1.8
CHPT1-209ENST00000552329 RBMY1DP0C7P1 496 aaKnown RBP3.78□□□□□ -1.8
CHPT1-209ENST00000552329 ZNF688P0C7X2 276 aa3.78□□□□□ -1.8
CHPT1-209ENST00000552329 PRB4P10163 310 aaPredicted RBP3.78□□□□□ -1.8
CHPT1-209ENST00000552329 APOC4P55056 127 aa3.78□□□□□ -1.8
CHPT1-209ENST00000552329 ATP5IP56385 69 aaPredicted RBP3.78□□□□□ -1.8
CHPT1-209ENST00000552329 DEFB131AP59861 70 aa3.78□□□□□ -1.8
CHPT1-209ENST00000552329 YPEL3P61236 119 aaPredicted RBP3.78□□□□□ -1.8
CHPT1-209ENST00000552329 SLC38A11Q08AI6 406 aa3.78□□□□□ -1.8
CHPT1-209ENST00000552329 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
CHPT1-209ENST00000552329 OR8I2Q8N0Y5 310 aa3.78□□□□□ -1.8
CHPT1-209ENST00000552329 BPIFCQ8NFQ6 507 aa3.78□□□□□ -1.8
CHPT1-209ENST00000552329 RPUSD4Q96CM3 377 aaKnown RBP3.78□□□□□ -1.8
CHPT1-209ENST00000552329 C2orf50Q96LR7 162 aa3.78□□□□□ -1.8
CHPT1-209ENST00000552329 LINC00052Q96N35 136 aa3.78□□□□□ -1.8
CHPT1-209ENST00000552329 MS4A6AQ9H2W1 248 aa3.78□□□□□ -1.8
CHPT1-209ENST00000552329 PPDPFQ9H3Y8 114 aa3.78□□□□□ -1.8
CHPT1-209ENST00000552329 IGKV1D-37A0A075B6S9 117 aa3.77□□□□□ -1.81
CHPT1-209ENST00000552329 IGKV1OR2-108A0A075B7D4 117 aa3.77□□□□□ -1.81
CHPT1-209ENST00000552329 LOC102724200A0A096LPH7 203 aaPredicted RBP3.77□□□□□ -1.81
CHPT1-209ENST00000552329 XKRY2A2RUG3 117 aa3.77□□□□□ -1.81
CHPT1-209ENST00000552329 KNCNA6PVL3 124 aa3.77□□□□□ -1.81
CHPT1-209ENST00000552329 TAGLN2P37802 199 aaKnown RBP3.77□□□□□ -1.81
CHPT1-209ENST00000552329 CTRLP40313 264 aa3.77□□□□□ -1.81
CHPT1-209ENST00000552329 EIF2B2P49770 351 aaKnown RBP3.77□□□□□ -1.81
CHPT1-209ENST00000552329 PSMG4Q5JS54 123 aa3.77□□□□□ -1.81
CHPT1-209ENST00000552329 ZFAND6Q6FIF0 208 aa3.77□□□□□ -1.81
CHPT1-209ENST00000552329 FAM24BQ8N5W8 94 aa3.77□□□□□ -1.81
CHPT1-209ENST00000552329 TMEM147Q9BVK8 224 aa3.77□□□□□ -1.81
CHPT1-209ENST00000552329 GGTLC1Q9BX51 225 aa3.77□□□□□ -1.81
CHPT1-209ENST00000552329 UBE2L5PA0A1B0GUS4 154 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 IGSF23A1L1A6 192 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 HELTA6NFD8 242 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 HYPMO75409 117 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 LINC00869P0C866 280 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 CRYBB3P26998 211 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 AP2S1P53680 142 aaPredicted RBP3.76□□□□□ -1.81
CHPT1-209ENST00000552329 CMC4P56277 68 aaPredicted RBP3.76□□□□□ -1.81
CHPT1-209ENST00000552329 FXYD7P58549 80 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 DEFB1P60022 68 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 BAXQ07812 192 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 CLINT1Q14677 625 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 DEFB135Q30KP9 77 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 ACTL10Q5JWF8 245 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 TMEM14EPQ6UXP3 125 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 CYP2G1PQ6ZSU1 146 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 TMEM144Q7Z5S9 345 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 STX12Q86Y82 276 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 LRRC20Q8TCA0 184 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 TRGV9Q99603 122 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 MARVELD1Q9BSK0 173 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 RSG1Q9BU20 258 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 SMIM3Q9BZL3 60 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 ARL6Q9H0F7 186 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 MED28Q9H204 178 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 VSIRQ9H7M9 311 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 NPVFQ9HCQ7 196 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 OR5AC2Q9NZP5 309 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 ALG5Q9Y673 324 aa3.76□□□□□ -1.81
CHPT1-209ENST00000552329 AGPAT2O15120 278 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 COX7A2P2O60397 106 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 CD5P06127 495 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 FGF7P21781 194 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 GALR1P47211 349 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 SULT1A1P50225 295 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 TAS2R30P59541 319 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 SNRPD3P62318 126 aaKnown RBP3.75□□□□□ -1.81
CHPT1-209ENST00000552329 HBG1P69891 147 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 HBG2P69892 147 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 RAB31Q13636 194 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 MIC13Q5XKP0 118 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 OR4B1Q8NGF8 309 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 PPP1R1CQ8WVI7 109 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 SCRT1Q9BWW7 348 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 SLC25A31Q9H0C2 315 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 UQCC1Q9NVA1 299 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 HIGD1AQ9Y241 93 aa3.75□□□□□ -1.81
CHPT1-209ENST00000552329 TRAV5A0A0B4J249 113 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 ZNF98A6NK75 572 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 F6UB75 175 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 DEFB4AO15263 64 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 DEDDO75618 318 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 PTTG1O95997 202 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 CFDP00746 253 aaPredicted RBP3.74□□□□□ -1.81
CHPT1-209ENST00000552329 CA1P00915 261 aaPredicted RBP3.74□□□□□ -1.81
CHPT1-209ENST00000552329 INSP01308 110 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 ZNF705DP0CH99 300 aaPredicted RBP3.74□□□□□ -1.81
CHPT1-209ENST00000552329 ZNF705BP0CI00 300 aaPredicted RBP3.74□□□□□ -1.81
CHPT1-209ENST00000552329 CXCL3P19876 107 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 S100A7P31151 101 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 S100A11P31949 105 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 NUP62P37198 522 aaPredicted RBP3.74□□□□□ -1.81
CHPT1-209ENST00000552329 H2BFSP57053 126 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 EWSR1Q01844 656 aaKnown RBP eCLIP3.74□□□□□ -1.81
CHPT1-209ENST00000552329 LAGE3Q14657 143 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 RGS21Q2M5E4 152 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 C10orf113Q5VZT2 155 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 LINC00305Q7Z4B0 112 aa3.74□□□□□ -1.81
CHPT1-209ENST00000552329 ZNF546Q86UE3 836 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms