RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 UBE2G2P60604 165 aa7.62□□□□□ -1.19
PTCH1-225ENST00000551845 GNG5P63218 68 aa7.62□□□□□ -1.19
PTCH1-225ENST00000551845 CEMP1Q6PRD7 247 aaPredicted RBP7.62□□□□□ -1.19
PTCH1-225ENST00000551845 C9orf62Q8N4C0 152 aa7.62□□□□□ -1.19
PTCH1-225ENST00000551845 PHLDA1Q8WV24 401 aaPredicted RBP7.62□□□□□ -1.19
PTCH1-225ENST00000551845 PYGO2Q9BRQ0 406 aa7.62□□□□□ -1.19
PTCH1-225ENST00000551845 KLK5Q9Y337 293 aaPredicted RBP7.62□□□□□ -1.19
PTCH1-225ENST00000551845 YTHDF2Q9Y5A9 579 aaKnown RBP7.62□□□□□ -1.19
PTCH1-225ENST00000551845 FBLL1A6NHQ2 334 aaKnown RBP7.61□□□□□ -1.19
PTCH1-225ENST00000551845 FAM74A7A6NL05 159 aa7.61□□□□□ -1.19
PTCH1-225ENST00000551845 F6UZH7 168 aa7.61□□□□□ -1.19
PTCH1-225ENST00000551845 TEX46H3BTG2 121 aa7.61□□□□□ -1.19
PTCH1-225ENST00000551845 ZNF324O75467 553 aaPredicted RBP7.61□□□□□ -1.19
PTCH1-225ENST00000551845 BTN1A1Q13410 526 aa7.61□□□□□ -1.19
PTCH1-225ENST00000551845 C12orf74Q32Q52 190 aa7.61□□□□□ -1.19
PTCH1-225ENST00000551845 FAM222AQ5U5X8 452 aa7.61□□□□□ -1.19
PTCH1-225ENST00000551845 ZFAND2AQ8N6M9 145 aa7.61□□□□□ -1.19
PTCH1-225ENST00000551845 Q8TAT8 98 aa7.61□□□□□ -1.19
PTCH1-225ENST00000551845 C16orf74Q96GX8 76 aa7.61□□□□□ -1.19
PTCH1-225ENST00000551845 SGK494Q96LW2 274 aa7.61□□□□□ -1.19
PTCH1-225ENST00000551845 NDFIP1Q9BT67 221 aa7.61□□□□□ -1.19
PTCH1-225ENST00000551845 DKK2Q9UBU2 259 aa7.61□□□□□ -1.19
PTCH1-225ENST00000551845 GGTLC3B5MD39 225 aa7.6□□□□□ -1.19
PTCH1-225ENST00000551845 RGS13O14921 159 aa7.6□□□□□ -1.19
PTCH1-225ENST00000551845 SULT1A2P50226 295 aa7.6□□□□□ -1.19
PTCH1-225ENST00000551845 PPT1P50897 306 aa7.6□□□□□ -1.19
PTCH1-225ENST00000551845 CST9LP1Q5W188 147 aa7.6□□□□□ -1.19
PTCH1-225ENST00000551845 CYB561D1Q8N8Q1 229 aa7.6□□□□□ -1.19
PTCH1-225ENST00000551845 TMEM263Q8WUH6 116 aaKnown RBP7.6□□□□□ -1.19
PTCH1-225ENST00000551845 HIST1H2BAQ96A08 127 aa7.6□□□□□ -1.19
PTCH1-225ENST00000551845 ATG101Q9BSB4 218 aa7.6□□□□□ -1.19
PTCH1-225ENST00000551845 TREM1Q9NP99 234 aa7.6□□□□□ -1.19
PTCH1-225ENST00000551845 CELA1Q9UNI1 258 aa7.6□□□□□ -1.19
PTCH1-225ENST00000551845 PSG8Q9UQ74 426 aa7.6□□□□□ -1.19
PTCH1-225ENST00000551845 TIMM8BQ9Y5J9 83 aaPredicted RBP7.6□□□□□ -1.19
PTCH1-225ENST00000551845 CSMD3Q7Z407 3707 aa7.6□□□□□ -1.19
PTCH1-225ENST00000551845 TRAV8-1A0A0A6YYK1 113 aa7.59□□□□□ -1.19
PTCH1-225ENST00000551845 TRAV10A0A0B4J240 114 aa7.59□□□□□ -1.19
PTCH1-225ENST00000551845 A0A1B0GV50 99 aa7.59□□□□□ -1.19
PTCH1-225ENST00000551845 CBY3A6NI87 242 aa7.59□□□□□ -1.19
PTCH1-225ENST00000551845 LYRM9A8MSI8 78 aa7.59□□□□□ -1.19
PTCH1-225ENST00000551845 PAGE4O60829 102 aa7.59□□□□□ -1.19
PTCH1-225ENST00000551845 FLI1Q01543 452 aaPredicted RBP7.59□□□□□ -1.19
PTCH1-225ENST00000551845 SAPCD1Q5SSQ6 148 aa7.59□□□□□ -1.19
PTCH1-225ENST00000551845 EIF4E3Q8N5X7 224 aaKnown RBP7.59□□□□□ -1.19
PTCH1-225ENST00000551845 C2CD4CQ8TF44 421 aa7.59□□□□□ -1.19
PTCH1-225ENST00000551845 LINC00467Q9BRT7 94 aa7.59□□□□□ -1.19
PTCH1-225ENST00000551845 ARL2-SNX15V9GYD0 113 aa7.59□□□□□ -1.19
PTCH1-225ENST00000551845 IGHV1OR15-1A0A075B7D0 117 aa7.58□□□□□ -1.2
PTCH1-225ENST00000551845 TRAV1-1A0A0B4J248 108 aa7.58□□□□□ -1.2
PTCH1-225ENST00000551845 SNURFLB1AK76 121 aa7.58□□□□□ -1.2
PTCH1-225ENST00000551845 DAD1P61803 113 aa7.58□□□□□ -1.2
PTCH1-225ENST00000551845 ANXA2RQ3ZCQ2 193 aa7.58□□□□□ -1.2
PTCH1-225ENST00000551845 FAM159AQ6UWV7 190 aa7.58□□□□□ -1.2
PTCH1-225ENST00000551845 Q6ZTC4 211 aa7.58□□□□□ -1.2
PTCH1-225ENST00000551845 ZNF767PQ75MW2 155 aa7.58□□□□□ -1.2
PTCH1-225ENST00000551845 PRNTQ86SH4 94 aa7.58□□□□□ -1.2
PTCH1-225ENST00000551845 TMEM75Q8N9X5 138 aa7.58□□□□□ -1.2
PTCH1-225ENST00000551845 RNASE8Q8TDE3 154 aaKnown RBP7.58□□□□□ -1.2
PTCH1-225ENST00000551845 TCEAL7Q9BRU2 100 aa7.58□□□□□ -1.2
PTCH1-225ENST00000551845 NOP10Q9NPE3 64 aaKnown RBP7.58□□□□□ -1.2
PTCH1-225ENST00000551845 DEFB131BA0A096LNP1 70 aa7.57□□□□□ -1.2
PTCH1-225ENST00000551845 TRAV21A0A0B4J279 112 aa7.57□□□□□ -1.2
PTCH1-225ENST00000551845 PLAC8L1A1L4L8 177 aa7.57□□□□□ -1.2
PTCH1-225ENST00000551845 PEX7O00628 323 aa7.57□□□□□ -1.2
PTCH1-225ENST00000551845 IGLV2-11P01706 119 aa7.57□□□□□ -1.2
PTCH1-225ENST00000551845 DEFB130BP0DP73 79 aa7.57□□□□□ -1.2
PTCH1-225ENST00000551845 DEFB130AP0DP74 79 aa7.57□□□□□ -1.2
PTCH1-225ENST00000551845 NKX2-5P52952 324 aaPredicted RBP7.57□□□□□ -1.2
PTCH1-225ENST00000551845 PRR9Q5T870 116 aa7.57□□□□□ -1.2
PTCH1-225ENST00000551845 Q6AWC8 147 aa7.57□□□□□ -1.2
PTCH1-225ENST00000551845 ZNF680Q8NEM1 530 aa7.57□□□□□ -1.2
PTCH1-225ENST00000551845 TVP23CQ96ET8 276 aa7.57□□□□□ -1.2
PTCH1-225ENST00000551845 LINC00479Q96M42 142 aa7.57□□□□□ -1.2
PTCH1-225ENST00000551845 ALMS1Q8TCU4 4167 aa7.56□□□□□ -1.2
PTCH1-225ENST00000551845 TRAV34A0A0B4J273 112 aa7.56□□□□□ -1.2
PTCH1-225ENST00000551845 A6NJY4 79 aa7.56□□□□□ -1.2
PTCH1-225ENST00000551845 IGLL5B9A064 214 aa7.56□□□□□ -1.2
PTCH1-225ENST00000551845 TCTAP57738 103 aa7.56□□□□□ -1.2
PTCH1-225ENST00000551845 UBE2G1P62253 170 aa7.56□□□□□ -1.2
PTCH1-225ENST00000551845 CCL20P78556 96 aa7.56□□□□□ -1.2
PTCH1-225ENST00000551845 DAZ2Q13117 558 aaKnown RBP7.56□□□□□ -1.2
PTCH1-225ENST00000551845 SMUG1Q53HV7 270 aa7.56□□□□□ -1.2
PTCH1-225ENST00000551845 MUC21Q5SSG8 566 aa7.56□□□□□ -1.2
PTCH1-225ENST00000551845 Q6ZQT7 251 aa7.56□□□□□ -1.2
PTCH1-225ENST00000551845 ZFP30Q9Y2G7 519 aa7.56□□□□□ -1.2
PTCH1-225ENST00000551845 S100A9P06702 114 aaKnown RBP7.55□□□□□ -1.2
PTCH1-225ENST00000551845 ATP5G3P48201 142 aa7.55□□□□□ -1.2
PTCH1-225ENST00000551845 BLOC1S1P78537 153 aa7.55□□□□□ -1.2
PTCH1-225ENST00000551845 IBA57Q5T440 356 aaKnown RBP7.55□□□□□ -1.2
PTCH1-225ENST00000551845 ALKAL2Q6UX46 152 aa7.55□□□□□ -1.2
PTCH1-225ENST00000551845 FMC1Q96HJ9 113 aa7.55□□□□□ -1.2
PTCH1-225ENST00000551845 KCNS1Q96KK3 526 aa7.55□□□□□ -1.2
PTCH1-225ENST00000551845 TXNDC17Q9BRA2 123 aa7.55□□□□□ -1.2
PTCH1-225ENST00000551845 MANBALQ9NQG1 85 aa7.55□□□□□ -1.2
PTCH1-225ENST00000551845 GSN-AS1Q9NRJ2 163 aa7.55□□□□□ -1.2
PTCH1-225ENST00000551845 GNG13Q9P2W3 67 aa7.55□□□□□ -1.2
PTCH1-225ENST00000551845 TRGV11A0A075B6L2 103 aa7.54□□□□□ -1.2
PTCH1-225ENST00000551845 FABP5P3A8MUU1 101 aa7.54□□□□□ -1.2
PTCH1-225ENST00000551845 GCGP01275 180 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms