RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 RAB5CP51148 216 aa12.39□□□□□ -0.43
CDK4-208ENST00000551706 BTN1A1Q13410 526 aa12.39□□□□□ -0.43
CDK4-208ENST00000551706 FAM222AQ5U5X8 452 aa12.39□□□□□ -0.43
CDK4-208ENST00000551706 C9orf62Q8N4C0 152 aa12.39□□□□□ -0.43
CDK4-208ENST00000551706 SFT2D1Q8WV19 159 aa12.39□□□□□ -0.43
CDK4-208ENST00000551706 MBD3L1Q8WWY6 194 aa12.39□□□□□ -0.43
CDK4-208ENST00000551706 LINC00476Q8WZB0 136 aa12.39□□□□□ -0.43
CDK4-208ENST00000551706 TMPRSS5Q9H3S3 457 aa12.39□□□□□ -0.43
CDK4-208ENST00000551706 EPDR1Q9UM22 224 aa12.39□□□□□ -0.43
CDK4-208ENST00000551706 TRAV10A0A0B4J240 114 aa12.38□□□□□ -0.43
CDK4-208ENST00000551706 FBLL1A6NHQ2 334 aaKnown RBP12.38□□□□□ -0.43
CDK4-208ENST00000551706 LYRM9A8MSI8 78 aa12.38□□□□□ -0.43
CDK4-208ENST00000551706 ZNF324O75467 553 aaPredicted RBP12.38□□□□□ -0.43
CDK4-208ENST00000551706 PRM2P04554 102 aa12.38□□□□□ -0.43
CDK4-208ENST00000551706 AZU1P20160 251 aa12.38□□□□□ -0.43
CDK4-208ENST00000551706 GNG5P63218 68 aa12.38□□□□□ -0.43
CDK4-208ENST00000551706 C12orf74Q32Q52 190 aa12.38□□□□□ -0.43
CDK4-208ENST00000551706 Q6ZTC4 211 aa12.38□□□□□ -0.43
CDK4-208ENST00000551706 CYB561D1Q8N8Q1 229 aa12.38□□□□□ -0.43
CDK4-208ENST00000551706 RNASE8Q8TDE3 154 aaKnown RBP12.38□□□□□ -0.43
CDK4-208ENST00000551706 LINC00467Q9BRT7 94 aa12.38□□□□□ -0.43
CDK4-208ENST00000551706 ARL2-SNX15V9GYD0 113 aa12.38□□□□□ -0.43
CDK4-208ENST00000551706 FAM74A7A6NL05 159 aa12.37□□□□□ -0.43
CDK4-208ENST00000551706 IFNA7P01567 189 aa12.37□□□□□ -0.43
CDK4-208ENST00000551706 H2AFB1P0C5Y9 115 aa12.37□□□□□ -0.43
CDK4-208ENST00000551706 UBE2G2P60604 165 aa12.37□□□□□ -0.43
CDK4-208ENST00000551706 ATG101Q9BSB4 218 aa12.37□□□□□ -0.43
CDK4-208ENST00000551706 NDFIP1Q9BT67 221 aa12.37□□□□□ -0.43
CDK4-208ENST00000551706 TIMM8BQ9Y5J9 83 aaPredicted RBP12.37□□□□□ -0.43
CDK4-208ENST00000551706 KIAA1109Q2LD37 5005 aa12.36□□□□□ -0.43
CDK4-208ENST00000551706 TRAV8-1A0A0A6YYK1 113 aa12.36□□□□□ -0.43
CDK4-208ENST00000551706 LY6G6CO95867 125 aa12.36□□□□□ -0.43
CDK4-208ENST00000551706 PRR9Q5T870 116 aa12.36□□□□□ -0.43
CDK4-208ENST00000551706 ZNF680Q8NEM1 530 aa12.36□□□□□ -0.43
CDK4-208ENST00000551706 C2CD4CQ8TF44 421 aa12.36□□□□□ -0.43
CDK4-208ENST00000551706 HIST1H2BAQ96A08 127 aa12.36□□□□□ -0.43
CDK4-208ENST00000551706 TCEAL7Q9BRU2 100 aa12.36□□□□□ -0.43
CDK4-208ENST00000551706 KMT2AQ03164 3969 aa12.36□□□□□ -0.43
CDK4-208ENST00000551706 PLAC8L1A1L4L8 177 aa12.35□□□□□ -0.43
CDK4-208ENST00000551706 PPT1P50897 306 aa12.35□□□□□ -0.43
CDK4-208ENST00000551706 DAD1P61803 113 aa12.35□□□□□ -0.43
CDK4-208ENST00000551706 ZNF767PQ75MW2 155 aa12.35□□□□□ -0.43
CDK4-208ENST00000551706 EIF4E3Q8N5X7 224 aaKnown RBP12.35□□□□□ -0.43
CDK4-208ENST00000551706 TMEM75Q8N9X5 138 aa12.35□□□□□ -0.43
CDK4-208ENST00000551706 TREM1Q9NP99 234 aa12.35□□□□□ -0.43
CDK4-208ENST00000551706 TEX46H3BTG2 121 aa12.34□□□□□ -0.43
CDK4-208ENST00000551706 RGS13O14921 159 aa12.34□□□□□ -0.43
CDK4-208ENST00000551706 SULT1A2P50226 295 aa12.34□□□□□ -0.43
CDK4-208ENST00000551706 TCTAP57738 103 aa12.34□□□□□ -0.43
CDK4-208ENST00000551706 FLI1Q01543 452 aaPredicted RBP12.34□□□□□ -0.43
CDK4-208ENST00000551706 ANXA2RQ3ZCQ2 193 aa12.34□□□□□ -0.43
CDK4-208ENST00000551706 Q6AWC8 147 aa12.34□□□□□ -0.43
CDK4-208ENST00000551706 PSG8Q9UQ74 426 aa12.34□□□□□ -0.43
CDK4-208ENST00000551706 IGHV1OR15-1A0A075B7D0 117 aa12.33□□□□□ -0.44
CDK4-208ENST00000551706 DEFB131BA0A096LNP1 70 aa12.33□□□□□ -0.44
CDK4-208ENST00000551706 CBY3A6NI87 242 aa12.33□□□□□ -0.44
CDK4-208ENST00000551706 SNURFLB1AK76 121 aa12.33□□□□□ -0.44
CDK4-208ENST00000551706 F6UZH7 168 aa12.33□□□□□ -0.44
CDK4-208ENST00000551706 PEX7O00628 323 aa12.33□□□□□ -0.44
CDK4-208ENST00000551706 CST9LP1Q5W188 147 aa12.33□□□□□ -0.44
CDK4-208ENST00000551706 DNAH10Q8IVF4 4471 aa12.33□□□□□ -0.44
CDK4-208ENST00000551706 TRAV1-1A0A0B4J248 108 aa12.32□□□□□ -0.44
CDK4-208ENST00000551706 SAPCD1Q5SSQ6 148 aa12.32□□□□□ -0.44
CDK4-208ENST00000551706 TVP23CQ96ET8 276 aa12.32□□□□□ -0.44
CDK4-208ENST00000551706 SGK494Q96LW2 274 aa12.32□□□□□ -0.44
CDK4-208ENST00000551706 NOP10Q9NPE3 64 aaKnown RBP12.32□□□□□ -0.44
CDK4-208ENST00000551706 TRAV21A0A0B4J279 112 aa12.31□□□□□ -0.44
CDK4-208ENST00000551706 A0A1B0GV50 99 aa12.31□□□□□ -0.44
CDK4-208ENST00000551706 PAGE4O60829 102 aa12.31□□□□□ -0.44
CDK4-208ENST00000551706 IGLV2-11P01706 119 aa12.31□□□□□ -0.44
CDK4-208ENST00000551706 DAZ2Q13117 558 aaKnown RBP12.31□□□□□ -0.44
CDK4-208ENST00000551706 IBA57Q5T440 356 aaKnown RBP12.31□□□□□ -0.44
CDK4-208ENST00000551706 FAM159AQ6UWV7 190 aa12.31□□□□□ -0.44
CDK4-208ENST00000551706 PRNTQ86SH4 94 aa12.31□□□□□ -0.44
CDK4-208ENST00000551706 BOLA1Q9Y3E2 137 aa12.31□□□□□ -0.44
CDK4-208ENST00000551706 IGLL5B9A064 214 aa12.3□□□□□ -0.44
CDK4-208ENST00000551706 DEFB130BP0DP73 79 aa12.3□□□□□ -0.44
CDK4-208ENST00000551706 DEFB130AP0DP74 79 aa12.3□□□□□ -0.44
CDK4-208ENST00000551706 MANBALQ9NQG1 85 aa12.3□□□□□ -0.44
CDK4-208ENST00000551706 SMUG1Q53HV7 270 aa12.29□□□□□ -0.44
CDK4-208ENST00000551706 C11orf72Q8NBR9 251 aa12.29□□□□□ -0.44
CDK4-208ENST00000551706 FAM210BQ96KR6 192 aa12.29□□□□□ -0.44
CDK4-208ENST00000551706 GSN-AS1Q9NRJ2 163 aa12.29□□□□□ -0.44
CDK4-208ENST00000551706 TRAV34A0A0B4J273 112 aa12.28□□□□□ -0.44
CDK4-208ENST00000551706 ATP5G3P48201 142 aa12.28□□□□□ -0.44
CDK4-208ENST00000551706 TCL1AP56279 114 aa12.28□□□□□ -0.44
CDK4-208ENST00000551706 ZNF415Q09FC8 603 aa12.28□□□□□ -0.44
CDK4-208ENST00000551706 TDRG1Q3Y452 100 aa12.28□□□□□ -0.44
CDK4-208ENST00000551706 MUC21Q5SSG8 566 aa12.28□□□□□ -0.44
CDK4-208ENST00000551706 Q6ZQT7 251 aa12.28□□□□□ -0.44
CDK4-208ENST00000551706 LINC00612Q8N6U2 182 aa12.28□□□□□ -0.44
CDK4-208ENST00000551706 FMC1Q96HJ9 113 aa12.28□□□□□ -0.44
CDK4-208ENST00000551706 LINC00479Q96M42 142 aa12.28□□□□□ -0.44
CDK4-208ENST00000551706 TRGV11A0A075B6L2 103 aa12.27□□□□□ -0.45
CDK4-208ENST00000551706 IGHV4-4A0A075B6R2 117 aa12.27□□□□□ -0.45
CDK4-208ENST00000551706 GCGP01275 180 aa12.27□□□□□ -0.45
CDK4-208ENST00000551706 ATP5G1P05496 136 aa12.27□□□□□ -0.45
CDK4-208ENST00000551706 HTN3P15516 51 aa12.27□□□□□ -0.45
CDK4-208ENST00000551706 UBE2G1P62253 170 aa12.27□□□□□ -0.45
CDK4-208ENST00000551706 KCNS1Q96KK3 526 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms