RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 PRR14LQ5THK1 2151 aa9.62□□□□□ -0.87
NR4A1-215ENST00000550557 Q0VG73 95 aa9.62□□□□□ -0.87
NR4A1-215ENST00000550557 GUSBP1Q15486 140 aa9.62□□□□□ -0.87
NR4A1-215ENST00000550557 OR2K2Q8NGT1 345 aa9.62□□□□□ -0.87
NR4A1-215ENST00000550557 GAGE12BA1L429 117 aa9.62□□□□□ -0.87
NR4A1-215ENST00000550557 GAGE7O76087 117 aa9.62□□□□□ -0.87
NR4A1-215ENST00000550557 TSPAN13O95857 204 aa9.62□□□□□ -0.87
NR4A1-215ENST00000550557 GAGE12FP0CL80 117 aa9.62□□□□□ -0.87
NR4A1-215ENST00000550557 GAGE12GP0CL81 117 aa9.62□□□□□ -0.87
NR4A1-215ENST00000550557 GAGE12IP0CL82 117 aa9.62□□□□□ -0.87
NR4A1-215ENST00000550557 PIFOQ8TCI5 191 aa9.62□□□□□ -0.87
NR4A1-215ENST00000550557 C20orf144Q9BQM9 153 aa9.61□□□□□ -0.87
NR4A1-215ENST00000550557 ABCA12Q86UK0 2595 aa9.61□□□□□ -0.87
NR4A1-215ENST00000550557 CITED2Q99967 270 aaPredicted RBP9.61□□□□□ -0.87
NR4A1-215ENST00000550557 IGHV7-81A0A0B4J1V7 117 aa9.61□□□□□ -0.87
NR4A1-215ENST00000550557 SNAI2O43623 268 aa9.61□□□□□ -0.87
NR4A1-215ENST00000550557 C3orf79P0CE67 100 aa9.61□□□□□ -0.87
NR4A1-215ENST00000550557 ERCC8Q13216 396 aa9.61□□□□□ -0.87
NR4A1-215ENST00000550557 SIRPDQ9H106 197 aa9.61□□□□□ -0.87
NR4A1-215ENST00000550557 TNFRSF13BO14836 293 aaPredicted RBP9.61□□□□□ -0.87
NR4A1-215ENST00000550557 APOMO95445 188 aa9.61□□□□□ -0.87
NR4A1-215ENST00000550557 CD28P10747 220 aa9.61□□□□□ -0.87
NR4A1-215ENST00000550557 C11orf1Q9H5F2 150 aa9.61□□□□□ -0.87
NR4A1-215ENST00000550557 COL5A1P20908 1838 aaPredicted RBP9.61□□□□□ -0.87
NR4A1-215ENST00000550557 HTTP42858 3142 aa9.6□□□□□ -0.87
NR4A1-215ENST00000550557 TRAV8-1A0A0A6YYK1 113 aa9.6□□□□□ -0.87
NR4A1-215ENST00000550557 Q8N7P7 452 aa9.6□□□□□ -0.87
NR4A1-215ENST00000550557 SPAG8Q99932 426 aaPredicted RBP9.6□□□□□ -0.87
NR4A1-215ENST00000550557 SMAD5-AS1Q9Y6J3 95 aa9.6□□□□□ -0.87
NR4A1-215ENST00000550557 CDKN1BP46527 198 aa9.6□□□□□ -0.87
NR4A1-215ENST00000550557 SHISA2Q6UWI4 295 aa9.6□□□□□ -0.87
NR4A1-215ENST00000550557 ZNF114Q8NC26 417 aa9.6□□□□□ -0.87
NR4A1-215ENST00000550557 RNASE1P07998 156 aaKnown RBP9.6□□□□□ -0.87
NR4A1-215ENST00000550557 NHP2Q9NX24 153 aaKnown RBP9.6□□□□□ -0.87
NR4A1-215ENST00000550557 C22orf34Q6ZV56 151 aa9.59□□□□□ -0.87
NR4A1-215ENST00000550557 IGKCP01834 107 aa9.59□□□□□ -0.87
NR4A1-215ENST00000550557 Q6ZPA2 131 aa9.59□□□□□ -0.87
NR4A1-215ENST00000550557 KLK9Q9UKQ9 250 aa9.59□□□□□ -0.87
NR4A1-215ENST00000550557 C5orf56Q8N8D9 126 aa9.59□□□□□ -0.87
NR4A1-215ENST00000550557 PYGO2Q9BRQ0 406 aa9.59□□□□□ -0.87
NR4A1-215ENST00000550557 NDUFA3O95167 84 aa9.59□□□□□ -0.87
NR4A1-215ENST00000550557 PLNP26678 52 aa9.59□□□□□ -0.87
NR4A1-215ENST00000550557 NUP35Q8NFH5 326 aa9.59□□□□□ -0.87
NR4A1-215ENST00000550557 SORL1Q92673 2214 aa9.59□□□□□ -0.88
NR4A1-215ENST00000550557 RBMY1BA6NDE4 496 aaKnown RBP9.58□□□□□ -0.88
NR4A1-215ENST00000550557 RBMY1EA6NEQ0 496 aaKnown RBP9.58□□□□□ -0.88
NR4A1-215ENST00000550557 RBMY1DP0C7P1 496 aaKnown RBP9.58□□□□□ -0.88
NR4A1-215ENST00000550557 RBMY1A1P0DJD3 496 aaKnown RBP9.58□□□□□ -0.88
NR4A1-215ENST00000550557 RBMY1CP0DJD4 496 aa9.58□□□□□ -0.88
NR4A1-215ENST00000550557 Q6ZWC4 215 aa9.58□□□□□ -0.88
NR4A1-215ENST00000550557 RHODO00212 210 aa9.58□□□□□ -0.88
NR4A1-215ENST00000550557 POU2AF1Q16633 256 aa9.58□□□□□ -0.88
NR4A1-215ENST00000550557 COA6Q5JTJ3 125 aaKnown RBP9.58□□□□□ -0.88
NR4A1-215ENST00000550557 ATP6V0BQ99437 205 aa9.58□□□□□ -0.88
NR4A1-215ENST00000550557 SH2D1AO60880 128 aa9.58□□□□□ -0.88
NR4A1-215ENST00000550557 Q8N9W7 124 aa9.58□□□□□ -0.88
NR4A1-215ENST00000550557 USP9XQ93008 2570 aaPredicted RBP9.58□□□□□ -0.88
NR4A1-215ENST00000550557 TRAV12-2A0A075B6T6 113 aa9.58□□□□□ -0.88
NR4A1-215ENST00000550557 AZU1P20160 251 aa9.58□□□□□ -0.88
NR4A1-215ENST00000550557 NPBQ8NG41 125 aa9.58□□□□□ -0.88
NR4A1-215ENST00000550557 AJUBAQ96IF1 538 aa9.58□□□□□ -0.88
NR4A1-215ENST00000550557 IGHV1OR15-1A0A075B7D0 117 aa9.57□□□□□ -0.88
NR4A1-215ENST00000550557 VWC2Q2TAL6 325 aa9.57□□□□□ -0.88
NR4A1-215ENST00000550557 C14orf178Q8N769 122 aaPredicted RBP9.57□□□□□ -0.88
NR4A1-215ENST00000550557 COL4A2P08572 1712 aa9.57□□□□□ -0.88
NR4A1-215ENST00000550557 ZNF479Q96JC4 524 aa9.57□□□□□ -0.88
NR4A1-215ENST00000550557 A0A087WWL8 130 aa9.57□□□□□ -0.88
NR4A1-215ENST00000550557 IGLC1P0CG04 106 aa9.57□□□□□ -0.88
NR4A1-215ENST00000550557 EVI2AP22794 236 aa9.57□□□□□ -0.88
NR4A1-215ENST00000550557 PHLDA1Q8WV24 401 aaPredicted RBP9.57□□□□□ -0.88
NR4A1-215ENST00000550557 C1orf159Q96HA4 380 aa9.57□□□□□ -0.88
NR4A1-215ENST00000550557 CHTOPQ9Y3Y2 248 aaKnown RBP9.57□□□□□ -0.88
NR4A1-215ENST00000550557 V9GYV3 84 aa9.57□□□□□ -0.88
NR4A1-215ENST00000550557 GAGE12JA6NER3 117 aa9.56□□□□□ -0.88
NR4A1-215ENST00000550557 IGLV2-14P01704 120 aa9.56□□□□□ -0.88
NR4A1-215ENST00000550557 CKS1BP61024 79 aa9.56□□□□□ -0.88
NR4A1-215ENST00000550557 GAGE1Q13065 139 aa9.56□□□□□ -0.88
NR4A1-215ENST00000550557 GAGE4Q13068 117 aa9.56□□□□□ -0.88
NR4A1-215ENST00000550557 GAGE5Q13069 117 aa9.56□□□□□ -0.88
NR4A1-215ENST00000550557 GAGE13Q4V321 117 aa9.56□□□□□ -0.88
NR4A1-215ENST00000550557 SIGMAR1Q99720 223 aa9.56□□□□□ -0.88
NR4A1-215ENST00000550557 EML5Q05BV3 1969 aa9.56□□□□□ -0.88
NR4A1-215ENST00000550557 INSL3P51460 131 aa9.56□□□□□ -0.88
NR4A1-215ENST00000550557 IGHV4OR15-8A0A075B7B6 117 aa9.56□□□□□ -0.88
NR4A1-215ENST00000550557 A0A087WW49 117 aa9.56□□□□□ -0.88
NR4A1-215ENST00000550557 IGLV1-47P01700 117 aa9.56□□□□□ -0.88
NR4A1-215ENST00000550557 ARMS2P0C7Q2 107 aa9.56□□□□□ -0.88
NR4A1-215ENST00000550557 IGLC7A0M8Q6 106 aa9.55□□□□□ -0.88
NR4A1-215ENST00000550557 A8MWV9 139 aa9.55□□□□□ -0.88
NR4A1-215ENST00000550557 IGHG2P01859 326 aa9.55□□□□□ -0.88
NR4A1-215ENST00000550557 MEGF9Q9H1U4 602 aa9.55□□□□□ -0.88
NR4A1-215ENST00000550557 FLNBO75369 2602 aaKnown RBP9.55□□□□□ -0.88
NR4A1-215ENST00000550557 TRAV8-2A0A0B4J237 113 aa9.55□□□□□ -0.88
NR4A1-215ENST00000550557 PRR31Q5SQ13 230 aa9.55□□□□□ -0.88
NR4A1-215ENST00000550557 LYZL1Q6UWQ5 148 aa9.55□□□□□ -0.88
NR4A1-215ENST00000550557 FOXI2Q6ZQN5 318 aa9.55□□□□□ -0.88
NR4A1-215ENST00000550557 FNDC4Q9H6D8 234 aaPredicted RBP9.55□□□□□ -0.88
NR4A1-215ENST00000550557 ATG2AQ2TAZ0 1938 aa9.55□□□□□ -0.88
NR4A1-215ENST00000550557 TRBV7-9A0A0J9YWB2 115 aa9.55□□□□□ -0.88
NR4A1-215ENST00000550557 ZNF815PA8K554 130 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms