RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, human

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE1B-206	ENST00000550285		M0QZ24	198 aa		10.91	□□□□□ -0.66
PDE1B-206	ENST00000550285	MAST4	O15021	2626 aa		10.91	□□□□□ -0.66
PDE1B-206	ENST00000550285	TYMS	P04818	313 aa		10.91	□□□□□ -0.66
PDE1B-206	ENST00000550285	ZNF688	P0C7X2	276 aa		10.91	□□□□□ -0.66
PDE1B-206	ENST00000550285	MRPL53	Q96EL3	112 aa	Known RBP	10.91	□□□□□ -0.66
PDE1B-206	ENST00000550285	ZFP30	Q9Y2G7	519 aa		10.91	□□□□□ -0.66
PDE1B-206	ENST00000550285	ATR	Q13535	2644 aa		10.91	□□□□□ -0.66
PDE1B-206	ENST00000550285		A0A1W2PPQ1	181 aa		10.9	□□□□□ -0.66
PDE1B-206	ENST00000550285	ZNF705G	A8MUZ8	300 aa	Predicted RBP	10.9	□□□□□ -0.66
PDE1B-206	ENST00000550285	KCNIP4	Q6PIL6	250 aa		10.9	□□□□□ -0.66
PDE1B-206	ENST00000550285	TMEM61	Q8N0U2	210 aa		10.9	□□□□□ -0.66
PDE1B-206	ENST00000550285	C19orf71	A6NCJ1	209 aa		10.9	□□□□□ -0.66
PDE1B-206	ENST00000550285		K7EQG2	157 aa		10.9	□□□□□ -0.66
PDE1B-206	ENST00000550285	OVOL1	O14753	267 aa		10.9	□□□□□ -0.66
PDE1B-206	ENST00000550285	ZNF80	P51504	273 aa	Predicted RBP	10.9	□□□□□ -0.66
PDE1B-206	ENST00000550285	FOXL1	Q12952	345 aa		10.9	□□□□□ -0.66
PDE1B-206	ENST00000550285	JOSD1	Q15040	202 aa	Predicted RBP	10.9	□□□□□ -0.66
PDE1B-206	ENST00000550285	SMIM12	Q96EX1	92 aa		10.9	□□□□□ -0.66
PDE1B-206	ENST00000550285	TCL1A	P56279	114 aa		10.89	□□□□□ -0.67
PDE1B-206	ENST00000550285	GDF5OS	Q5U4N7	250 aa		10.89	□□□□□ -0.67
PDE1B-206	ENST00000550285	FAM231D	Q6ZW35	169 aa		10.89	□□□□□ -0.67
PDE1B-206	ENST00000550285	BTF3L4	Q96K17	158 aa		10.89	□□□□□ -0.67
PDE1B-206	ENST00000550285	GOLT1B	Q9Y3E0	138 aa		10.89	□□□□□ -0.67
PDE1B-206	ENST00000550285	RBAKDN	A6NC62	111 aa		10.89	□□□□□ -0.67
PDE1B-206	ENST00000550285	IZUMO1R	A6ND01	250 aa		10.89	□□□□□ -0.67
PDE1B-206	ENST00000550285	DLEU1	O43261	78 aa		10.89	□□□□□ -0.67
PDE1B-206	ENST00000550285	DEFB114	Q30KQ6	69 aa		10.89	□□□□□ -0.67
PDE1B-206	ENST00000550285	CD300E	Q496F6	205 aa	Predicted RBP	10.89	□□□□□ -0.67
PDE1B-206	ENST00000550285	IL36B	Q9NZH7	164 aa		10.89	□□□□□ -0.67
PDE1B-206	ENST00000550285	CD33	P20138	364 aa		10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285	RPL19	P84098	196 aa	Known RBP	10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285	PSMG4	Q5JS54	123 aa		10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285	SAPCD1	Q5SSQ6	148 aa		10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285	C9orf47	Q6ZRZ4	202 aa		10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285	NDUFA11	Q86Y39	141 aa		10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285	DYNLRB2	Q8TF09	96 aa		10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285	CLEC5A	Q9NY25	188 aa		10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285	AGRN	O00468	2067 aa		10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285	FRMD6-AS1	P0C7T7	363 aa		10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285	HIST1H1A	Q02539	215 aa	Predicted RBP	10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285	TMEM78	Q5T7P6	136 aa		10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285		Q6ZQT7	251 aa		10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285	MRPL52	Q86TS9	123 aa	Known RBP	10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285	ZNF492	Q9P255	531 aa		10.88	□□□□□ -0.67
PDE1B-206	ENST00000550285	SPINK4	O60575	86 aa		10.87	□□□□□ -0.67
PDE1B-206	ENST00000550285	CT45A10	P0DMU9	189 aa		10.87	□□□□□ -0.67
PDE1B-206	ENST00000550285	GZMB	P10144	247 aa		10.87	□□□□□ -0.67
PDE1B-206	ENST00000550285	ID1	P41134	155 aa		10.87	□□□□□ -0.67
PDE1B-206	ENST00000550285	ZNF138	P52744	262 aa		10.87	□□□□□ -0.67
PDE1B-206	ENST00000550285	OR8A1	Q8NGG7	326 aa		10.87	□□□□□ -0.67
PDE1B-206	ENST00000550285		A0A1B0GUS0	222 aa		10.86	□□□□□ -0.67
PDE1B-206	ENST00000550285		P01737	135 aa		10.86	□□□□□ -0.67
PDE1B-206	ENST00000550285	G0S2	P27469	103 aa		10.86	□□□□□ -0.67
PDE1B-206	ENST00000550285	ACTL10	Q5JWF8	245 aa		10.86	□□□□□ -0.67
PDE1B-206	ENST00000550285	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.86	□□□□□ -0.67
PDE1B-206	ENST00000550285	ZNF664	Q8N3J9	261 aa		10.86	□□□□□ -0.67
PDE1B-206	ENST00000550285	SPATA3	Q8NHX4	192 aa		10.86	□□□□□ -0.67
PDE1B-206	ENST00000550285	DAZAP1	Q96EP5	407 aa	Known RBP	10.86	□□□□□ -0.67
PDE1B-206	ENST00000550285	PACRG	Q96M98	296 aa	Predicted RBP	10.86	□□□□□ -0.67
PDE1B-206	ENST00000550285		J3KRW8	73 aa		10.86	□□□□□ -0.67
PDE1B-206	ENST00000550285	ZNF25	P17030	456 aa	Predicted RBP	10.86	□□□□□ -0.67
PDE1B-206	ENST00000550285	GFI1B	Q5VTD9	330 aa		10.86	□□□□□ -0.67
PDE1B-206	ENST00000550285	RPP21	Q9H633	154 aa	Known RBP	10.86	□□□□□ -0.67
PDE1B-206	ENST00000550285	SMIM27	A0A1W2PRY6	76 aa		10.85	□□□□□ -0.67
PDE1B-206	ENST00000550285	NPIPB6	E9PJ23	425 aa		10.85	□□□□□ -0.67
PDE1B-206	ENST00000550285		M0R143	59 aa		10.85	□□□□□ -0.67
PDE1B-206	ENST00000550285	EREG	O14944	169 aa		10.85	□□□□□ -0.67
PDE1B-206	ENST00000550285	SH2D1A	O60880	128 aa		10.85	□□□□□ -0.67
PDE1B-206	ENST00000550285	FABP4	P15090	132 aa		10.85	□□□□□ -0.67
PDE1B-206	ENST00000550285	KIR3DS1	Q14943	382 aa		10.85	□□□□□ -0.67
PDE1B-206	ENST00000550285	KRTAP24-1	Q3LI83	254 aa		10.85	□□□□□ -0.67
PDE1B-206	ENST00000550285	COA6	Q5JTJ3	125 aa	Known RBP	10.85	□□□□□ -0.67
PDE1B-206	ENST00000550285	PRR9	Q5T870	116 aa		10.85	□□□□□ -0.67
PDE1B-206	ENST00000550285	COX8C	Q7Z4L0	72 aa		10.85	□□□□□ -0.67
PDE1B-206	ENST00000550285	OR10J6P	Q8NGY7	276 aa		10.85	□□□□□ -0.67
PDE1B-206	ENST00000550285	FBLL1	A6NHQ2	334 aa	Known RBP	10.85	□□□□□ -0.67
PDE1B-206	ENST00000550285	TMEM208	Q9BTX3	173 aa		10.85	□□□□□ -0.67
PDE1B-206	ENST00000550285	SNRPD3	P62318	126 aa	Known RBP	10.84	□□□□□ -0.67
PDE1B-206	ENST00000550285	PAFAH1B2	P68402	229 aa		10.84	□□□□□ -0.67
PDE1B-206	ENST00000550285	PRIMA1	Q86XR5	153 aa		10.84	□□□□□ -0.67
PDE1B-206	ENST00000550285	OR2D3	Q8NGH3	330 aa		10.84	□□□□□ -0.67
PDE1B-206	ENST00000550285	GTSF1	Q8WW33	167 aa		10.84	□□□□□ -0.67
PDE1B-206	ENST00000550285	HIST1H2BL	Q99880	126 aa		10.84	□□□□□ -0.67
PDE1B-206	ENST00000550285	NDFIP1	Q9BT67	221 aa		10.84	□□□□□ -0.67
PDE1B-206	ENST00000550285	SNHG12	Q9BXW3	62 aa		10.84	□□□□□ -0.67
PDE1B-206	ENST00000550285	TRAV9-1	A0A075B6T8	112 aa		10.84	□□□□□ -0.67
PDE1B-206	ENST00000550285	TMSB15B	A0A087X1C1	80 aa		10.84	□□□□□ -0.67
PDE1B-206	ENST00000550285	SAP30	O75446	220 aa		10.84	□□□□□ -0.67
PDE1B-206	ENST00000550285	IGKV3-20	P01619	116 aa		10.84	□□□□□ -0.67
PDE1B-206	ENST00000550285	LINC00477	Q96M19	166 aa		10.84	□□□□□ -0.67
PDE1B-206	ENST00000550285	CITED1	Q99966	193 aa		10.84	□□□□□ -0.67
PDE1B-206	ENST00000550285	FAM162B	Q5T6X4	162 aa		10.83	□□□□□ -0.68
PDE1B-206	ENST00000550285	ZNF575	Q86XF7	245 aa		10.83	□□□□□ -0.68
PDE1B-206	ENST00000550285	TRRAP	Q9Y4A5	3859 aa		10.83	□□□□□ -0.68
PDE1B-206	ENST00000550285	PF4	P02776	101 aa		10.82	□□□□□ -0.68
PDE1B-206	ENST00000550285	DEFB131A	P59861	70 aa		10.82	□□□□□ -0.68
PDE1B-206	ENST00000550285	SAMD13	Q5VXD3	122 aa		10.82	□□□□□ -0.68
PDE1B-206	ENST00000550285	ZFAND2A	Q8N6M9	145 aa		10.82	□□□□□ -0.68
PDE1B-206	ENST00000550285	NUP35	Q8NFH5	326 aa		10.82	□□□□□ -0.68
PDE1B-206	ENST00000550285	TSKU	Q8WUA8	353 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms