RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 SCO2A0A1W2PP80 73 aa9.63□□□□□ -0.87
NUP188-211ENST00000550219 RAB19A4D1S5 217 aa9.63□□□□□ -0.87
NUP188-211ENST00000550219 LINC00862A6NCI5 91 aa9.63□□□□□ -0.87
NUP188-211ENST00000550219 FBLL1A6NHQ2 334 aaKnown RBP9.63□□□□□ -0.87
NUP188-211ENST00000550219 ZNF705DP0CH99 300 aaPredicted RBP9.63□□□□□ -0.87
NUP188-211ENST00000550219 ZNF705BP0CI00 300 aaPredicted RBP9.63□□□□□ -0.87
NUP188-211ENST00000550219 CNN1P51911 297 aaKnown RBP9.63□□□□□ -0.87
NUP188-211ENST00000550219 EMP1P54849 157 aa9.63□□□□□ -0.87
NUP188-211ENST00000550219 HIST1H1AQ02539 215 aaPredicted RBP9.63□□□□□ -0.87
NUP188-211ENST00000550219 ERCC8Q13216 396 aa9.63□□□□□ -0.87
NUP188-211ENST00000550219 AMTNQ6UX39 209 aa9.63□□□□□ -0.87
NUP188-211ENST00000550219 FAM19A4Q96LR4 140 aa9.63□□□□□ -0.87
NUP188-211ENST00000550219 EIF5A2Q9GZV4 153 aaKnown RBP9.63□□□□□ -0.87
NUP188-211ENST00000550219 SMDT1Q9H4I9 107 aa9.63□□□□□ -0.87
NUP188-211ENST00000550219 TRBV6-1A0A0K0K1D8 114 aa9.62□□□□□ -0.87
NUP188-211ENST00000550219 IGLV2-11P01706 119 aa9.62□□□□□ -0.87
NUP188-211ENST00000550219 CT45A10P0DMU9 189 aa9.62□□□□□ -0.87
NUP188-211ENST00000550219 SRSF3P84103 164 aaKnown RBP9.62□□□□□ -0.87
NUP188-211ENST00000550219 C12orf74Q32Q52 190 aa9.62□□□□□ -0.87
NUP188-211ENST00000550219 TMEM75Q8N9X5 138 aa9.62□□□□□ -0.87
NUP188-211ENST00000550219 OR4B1Q8NGF8 309 aa9.62□□□□□ -0.87
NUP188-211ENST00000550219 ODF3Q96PU9 254 aa9.62□□□□□ -0.87
NUP188-211ENST00000550219 RPH3ALQ9UNE2 315 aa9.62□□□□□ -0.87
NUP188-211ENST00000550219 TRAV8-1A0A0A6YYK1 113 aa9.61□□□□□ -0.87
NUP188-211ENST00000550219 TRBV7-9A0A0J9YWB2 115 aa9.61□□□□□ -0.87
NUP188-211ENST00000550219 C9JQL5 133 aa9.61□□□□□ -0.87
NUP188-211ENST00000550219 TMEM250H0YL14 139 aa9.61□□□□□ -0.87
NUP188-211ENST00000550219 K7EQM0 130 aa9.61□□□□□ -0.87
NUP188-211ENST00000550219 AMBPP02760 352 aa9.61□□□□□ -0.87
NUP188-211ENST00000550219 SRP19P09132 144 aaKnown RBP9.61□□□□□ -0.87
NUP188-211ENST00000550219 ZNF138P52744 262 aa9.61□□□□□ -0.87
NUP188-211ENST00000550219 PEA15Q15121 130 aa9.61□□□□□ -0.87
NUP188-211ENST00000550219 TMEM183BQ1AE95 376 aa9.61□□□□□ -0.87
NUP188-211ENST00000550219 LINC00479Q96M42 142 aa9.61□□□□□ -0.87
NUP188-211ENST00000550219 ZNF492Q9P255 531 aa9.61□□□□□ -0.87
NUP188-211ENST00000550219 LENEPQ9Y5L5 61 aa9.61□□□□□ -0.87
NUP188-211ENST00000550219 DNAH10Q8IVF4 4471 aa9.6□□□□□ -0.87
NUP188-211ENST00000550219 TRAV34A0A0B4J273 112 aa9.6□□□□□ -0.87
NUP188-211ENST00000550219 S100A9P06702 114 aaKnown RBP9.6□□□□□ -0.87
NUP188-211ENST00000550219 AKR1C3P42330 323 aa9.6□□□□□ -0.87
NUP188-211ENST00000550219 TMEM78Q5T7P6 136 aa9.6□□□□□ -0.87
NUP188-211ENST00000550219 EIF4E3Q8N5X7 224 aaKnown RBP9.6□□□□□ -0.87
NUP188-211ENST00000550219 FMC1Q96HJ9 113 aa9.6□□□□□ -0.87
NUP188-211ENST00000550219 PSG8Q9UQ74 426 aa9.6□□□□□ -0.87
NUP188-211ENST00000550219 VPS13DQ5THJ4 4388 aa9.59□□□□□ -0.87
NUP188-211ENST00000550219 CRISP2P16562 243 aa9.59□□□□□ -0.87
NUP188-211ENST00000550219 TAS2R60P59551 318 aa9.59□□□□□ -0.87
NUP188-211ENST00000550219 FLI1Q01543 452 aaPredicted RBP9.59□□□□□ -0.87
NUP188-211ENST00000550219 TVP23CQ96ET8 276 aa9.59□□□□□ -0.87
NUP188-211ENST00000550219 NDUFAF3Q9BU61 184 aa9.59□□□□□ -0.87
NUP188-211ENST00000550219 SLC35B3Q9H1N7 401 aa9.59□□□□□ -0.87
NUP188-211ENST00000550219 SPART-AS1P0CW21 52 aa9.58□□□□□ -0.88
NUP188-211ENST00000550219 RPL35P42766 123 aaKnown RBP9.58□□□□□ -0.88
NUP188-211ENST00000550219 UQCC3Q6UW78 93 aa9.58□□□□□ -0.88
NUP188-211ENST00000550219 ZNF705AQ6ZN79 300 aaPredicted RBP9.58□□□□□ -0.88
NUP188-211ENST00000550219 COX8CQ7Z4L0 72 aa9.58□□□□□ -0.88
NUP188-211ENST00000550219 ZFAND2AQ8N6M9 145 aa9.58□□□□□ -0.88
NUP188-211ENST00000550219 Q8TAT8 98 aa9.58□□□□□ -0.88
NUP188-211ENST00000550219 SGK494Q96LW2 274 aa9.58□□□□□ -0.88
NUP188-211ENST00000550219 DERL1Q9BUN8 251 aa9.58□□□□□ -0.88
NUP188-211ENST00000550219 TMEM189A5PLL7 270 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 KLLNB2CW77 178 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 M0R2N4 97 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 LTAP01374 205 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 P0DMU3 169 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 FAM231AP0DMU4 169 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 FAM231CP0DMU5 169 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 HTN3P15516 51 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 TSPOP30536 169 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 LEPP41159 167 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 SAPCD1Q5SSQ6 148 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 PRNTQ86SH4 94 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 Q86TA4 180 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 COMMD7Q86VX2 200 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 UBE2DNLQ8IWF7 75 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 IGF2BP2-AS1Q96M15 143 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 KRTAP17-1Q9BYP8 105 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 PARLQ9H300 379 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 ZFP30Q9Y2G7 519 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 GOLT1BQ9Y3E0 138 aa9.57□□□□□ -0.88
NUP188-211ENST00000550219 CRXO43186 299 aaPredicted RBP9.56□□□□□ -0.88
NUP188-211ENST00000550219 CDKN1BP46527 198 aa9.56□□□□□ -0.88
NUP188-211ENST00000550219 UBE2G1P62253 170 aa9.56□□□□□ -0.88
NUP188-211ENST00000550219 SPINK13Q1W4C9 94 aa9.56□□□□□ -0.88
NUP188-211ENST00000550219 FAM222AQ5U5X8 452 aa9.56□□□□□ -0.88
NUP188-211ENST00000550219 NEU1Q99519 415 aa9.56□□□□□ -0.88
NUP188-211ENST00000550219 MLST8Q9BVC4 326 aa9.56□□□□□ -0.88
NUP188-211ENST00000550219 DNAH6Q9C0G6 4158 aa9.55□□□□□ -0.88
NUP188-211ENST00000550219 TRBV20OR9-2A0A075B6H5 130 aa9.55□□□□□ -0.88
NUP188-211ENST00000550219 SMIM9A6NGZ8 99 aa9.55□□□□□ -0.88
NUP188-211ENST00000550219 C9JCJ5 164 aa9.55□□□□□ -0.88
NUP188-211ENST00000550219 M0R2Z0 102 aa9.55□□□□□ -0.88
NUP188-211ENST00000550219 KIR3DS1Q14943 382 aa9.55□□□□□ -0.88
NUP188-211ENST00000550219 LCE2DQ5TA82 110 aaPredicted RBP9.55□□□□□ -0.88
NUP188-211ENST00000550219 BAGE2Q86Y30 109 aa9.55□□□□□ -0.88
NUP188-211ENST00000550219 TMEM183AQ8IXX5 376 aa9.55□□□□□ -0.88
NUP188-211ENST00000550219 POM121L12Q8N7R1 296 aa9.55□□□□□ -0.88
NUP188-211ENST00000550219 SMIM12Q96EX1 92 aa9.55□□□□□ -0.88
NUP188-211ENST00000550219 NDFIP1Q9BT67 221 aa9.55□□□□□ -0.88
NUP188-211ENST00000550219 TREM1Q9NP99 234 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms