RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 KRTAP29-1A8MX34 341 aaPredicted RBP6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 L7N2F9 121 aa6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 NOL3O60936 208 aaKnown RBP6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 CRYGDP07320 174 aa6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 SRIP30626 198 aa6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 S100A11P31949 105 aa6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 VAMP2P63027 116 aa6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 SUMO1P63165 101 aaKnown RBP6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 TMEM78Q5T7P6 136 aa6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 PRR9Q5T870 116 aa6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 Q6ZQT7 251 aa6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 ARPC5LQ9BPX5 153 aa6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 SRRQ9GZT4 340 aa6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 AAMDCQ9H7C9 122 aa6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 UQCC1Q9NVA1 299 aa6.61□□□□□ -1.35
TRAFD1-207ENST00000550051 CST7O76096 145 aa6.6□□□□□ -1.35
TRAFD1-207ENST00000550051 GYPEP15421 78 aa6.6□□□□□ -1.35
TRAFD1-207ENST00000550051 ZNF138P52744 262 aa6.6□□□□□ -1.35
TRAFD1-207ENST00000550051 TIRAPP58753 221 aa6.6□□□□□ -1.35
TRAFD1-207ENST00000550051 BAK1Q16611 211 aa6.6□□□□□ -1.35
TRAFD1-207ENST00000550051 C21orf62-AS1Q17RA5 79 aa6.6□□□□□ -1.35
TRAFD1-207ENST00000550051 SH2D6Q7Z4S9 175 aa6.6□□□□□ -1.35
TRAFD1-207ENST00000550051 ZNF479Q96JC4 524 aa6.6□□□□□ -1.35
TRAFD1-207ENST00000550051 TXNDC17Q9BRA2 123 aa6.6□□□□□ -1.35
TRAFD1-207ENST00000550051 SPXQ9BT56 116 aa6.6□□□□□ -1.35
TRAFD1-207ENST00000550051 IGKV2-40A0A087WW87 121 aaPredicted RBP6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 IGHV3-38A0A0C4DH36 116 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 FAM24AA6NFZ4 105 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 IBA57-AS1B1ANH7 110 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 C9JCJ5 164 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 IGKV2D-40P01614 121 aaPredicted RBP6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 NBEAP1P0C6P0 100 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 PYYP10082 97 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 INPP1P49441 399 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 BCAP31P51572 246 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 CAV2P51636 162 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 HAMPP81172 84 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 ZNF266Q14584 549 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 ATP6V1FQ16864 119 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 SPANXN2Q5MJ10 180 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 Q8N814 137 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 BLNKQ8WV28 456 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 PCNPQ8WW12 178 aaKnown RBP6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 FAM167A-AS1Q96KT0 104 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 FAM30AQ9NZY2 134 aa6.59□□□□□ -1.35
TRAFD1-207ENST00000550051 RBAKDNA6NC62 111 aa6.58□□□□□ -1.36
TRAFD1-207ENST00000550051 CENPXA8MT69 81 aa6.58□□□□□ -1.36
TRAFD1-207ENST00000550051 PSCAO43653 123 aa6.58□□□□□ -1.36
TRAFD1-207ENST00000550051 PLA2G1BP04054 148 aaKnown RBP6.58□□□□□ -1.36
TRAFD1-207ENST00000550051 SFTA3P0C7M3 94 aa6.58□□□□□ -1.36
TRAFD1-207ENST00000550051 BTCP35070 178 aa6.58□□□□□ -1.36
TRAFD1-207ENST00000550051 SULT1A1P50225 295 aa6.58□□□□□ -1.36
TRAFD1-207ENST00000550051 ZNF846Q147U1 533 aa6.58□□□□□ -1.36
TRAFD1-207ENST00000550051 LINC01556Q5JQF7 62 aa6.58□□□□□ -1.36
TRAFD1-207ENST00000550051 FAM122CQ6P4D5 195 aa6.58□□□□□ -1.36
TRAFD1-207ENST00000550051 SLC25A2Q9BXI2 301 aa6.58□□□□□ -1.36
TRAFD1-207ENST00000550051 GPN1Q9HCN4 374 aaPredicted RBP6.58□□□□□ -1.36
TRAFD1-207ENST00000550051 LSM5Q9Y4Y9 91 aaKnown RBP6.58□□□□□ -1.36
TRAFD1-207ENST00000550051 LENEPQ9Y5L5 61 aa6.58□□□□□ -1.36
TRAFD1-207ENST00000550051 TRAV4A0A0B4J268 109 aa6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 PVALBP20472 110 aaPredicted RBP6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 HBG1P69891 147 aa6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 HBG2P69892 147 aa6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 BAXQ07812 192 aa6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 IL15RAQ13261 267 aa6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 TDRG1Q3Y452 100 aa6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 SERTAD4-AS1Q5TG53 156 aa6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 TRIQKQ629K1 86 aa6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 Q6AWC8 147 aa6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 Q6ZSA8 131 aa6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 TMEM252Q8N6L7 170 aa6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 DEFB104AQ8WTQ1 72 aa6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 C2orf50Q96LR7 162 aa6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 SDHCQ99643 169 aaPredicted RBP6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 OR51M1Q9H341 326 aa6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 LYRM2Q9NU23 88 aaPredicted RBP6.57□□□□□ -1.36
TRAFD1-207ENST00000550051 UBE2L5PA0A1B0GUS4 154 aa6.56□□□□□ -1.36
TRAFD1-207ENST00000550051 IGSF23A1L1A6 192 aa6.56□□□□□ -1.36
TRAFD1-207ENST00000550051 CCSO14618 274 aa6.56□□□□□ -1.36
TRAFD1-207ENST00000550051 FGF7P21781 194 aa6.56□□□□□ -1.36
TRAFD1-207ENST00000550051 GCSAMLQ5JQS6 135 aa6.56□□□□□ -1.36
TRAFD1-207ENST00000550051 MUC21Q5SSG8 566 aa6.56□□□□□ -1.36
TRAFD1-207ENST00000550051 FAM159AQ6UWV7 190 aa6.56□□□□□ -1.36
TRAFD1-207ENST00000550051 OR4C5Q8NGB2 326 aa6.56□□□□□ -1.36
TRAFD1-207ENST00000550051 FXYD5Q96DB9 178 aa6.56□□□□□ -1.36
TRAFD1-207ENST00000550051 SLC25A31Q9H0C2 315 aa6.56□□□□□ -1.36
TRAFD1-207ENST00000550051 TRGV11A0A075B6L2 103 aa6.55□□□□□ -1.36
TRAFD1-207ENST00000550051 TRAV8-6A0A0B4J262 113 aa6.55□□□□□ -1.36
TRAFD1-207ENST00000550051 LOC100131303A0A0U1RQF7 123 aa6.55□□□□□ -1.36
TRAFD1-207ENST00000550051 SCO2A0A1W2PP80 73 aa6.55□□□□□ -1.36
TRAFD1-207ENST00000550051 C5orf51A6NDU8 294 aa6.55□□□□□ -1.36
TRAFD1-207ENST00000550051 M0R2P5 195 aa6.55□□□□□ -1.36
TRAFD1-207ENST00000550051 CIDEAO60543 219 aa6.55□□□□□ -1.36
TRAFD1-207ENST00000550051 PFN1P07737 140 aaKnown RBP6.55□□□□□ -1.36
TRAFD1-207ENST00000550051 GATA1P15976 413 aaPredicted RBP6.55□□□□□ -1.36
TRAFD1-207ENST00000550051 CSN1S1P47710 185 aa6.55□□□□□ -1.36
TRAFD1-207ENST00000550051 TMEM183BQ1AE95 376 aa6.55□□□□□ -1.36
TRAFD1-207ENST00000550051 MIR17HGQ75NE6 70 aa6.55□□□□□ -1.36
TRAFD1-207ENST00000550051 STX12Q86Y82 276 aa6.55□□□□□ -1.36
TRAFD1-207ENST00000550051 TMEM183AQ8IXX5 376 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms