RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 OSTCQ9NRP0 149 aa12.84□□□□□ -0.35
LETMD1-220ENST00000549686 AURKAIP1Q9NWT8 199 aaPredicted RBP12.84□□□□□ -0.35
LETMD1-220ENST00000549686 SORL1Q92673 2214 aa12.83□□□□□ -0.36
LETMD1-220ENST00000549686 IGKV3-20P01619 116 aa12.83□□□□□ -0.36
LETMD1-220ENST00000549686 GPX1P07203 203 aa12.83□□□□□ -0.36
LETMD1-220ENST00000549686 MORN3Q6PF18 240 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-220ENST00000549686 Q8N1Y9 231 aa12.83□□□□□ -0.36
LETMD1-220ENST00000549686 ANAPC16Q96DE5 110 aa12.83□□□□□ -0.36
LETMD1-220ENST00000549686 SFRP2Q96HF1 295 aa12.83□□□□□ -0.36
LETMD1-220ENST00000549686 A0A087WWC5 75 aa12.82□□□□□ -0.36
LETMD1-220ENST00000549686 TRAV21A0A0B4J279 112 aa12.82□□□□□ -0.36
LETMD1-220ENST00000549686 FABP5P3A8MUU1 101 aa12.82□□□□□ -0.36
LETMD1-220ENST00000549686 PFN1P07737 140 aaKnown RBP12.82□□□□□ -0.36
LETMD1-220ENST00000549686 ERVFC1-1P60608 527 aa12.82□□□□□ -0.36
LETMD1-220ENST00000549686 OR5I1Q13606 314 aa12.82□□□□□ -0.36
LETMD1-220ENST00000549686 IBA57Q5T440 356 aaKnown RBP12.82□□□□□ -0.36
LETMD1-220ENST00000549686 PRR27Q6MZM9 219 aa12.82□□□□□ -0.36
LETMD1-220ENST00000549686 DEFB125Q8N687 156 aa12.82□□□□□ -0.36
LETMD1-220ENST00000549686 CTDSP1Q9GZU7 261 aa12.82□□□□□ -0.36
LETMD1-220ENST00000549686 C7orf77A4D0Y5 90 aa12.81□□□□□ -0.36
LETMD1-220ENST00000549686 C19orf71A6NCJ1 209 aa12.81□□□□□ -0.36
LETMD1-220ENST00000549686 G3V4G9 280 aa12.81□□□□□ -0.36
LETMD1-220ENST00000549686 P01737 135 aa12.81□□□□□ -0.36
LETMD1-220ENST00000549686 Q6AWC8 147 aa12.81□□□□□ -0.36
LETMD1-220ENST00000549686 OR10G8Q8NGN5 311 aa12.81□□□□□ -0.36
LETMD1-220ENST00000549686 WFDC10AQ9H1F0 79 aa12.81□□□□□ -0.36
LETMD1-220ENST00000549686 SRD5A3Q9H8P0 318 aa12.81□□□□□ -0.36
LETMD1-220ENST00000549686 C7orf71A4D174 169 aa12.8□□□□□ -0.36
LETMD1-220ENST00000549686 RBMY1BA6NDE4 496 aaKnown RBP12.8□□□□□ -0.36
LETMD1-220ENST00000549686 RBMY1EA6NEQ0 496 aaKnown RBP12.8□□□□□ -0.36
LETMD1-220ENST00000549686 RBMY1DP0C7P1 496 aaKnown RBP12.8□□□□□ -0.36
LETMD1-220ENST00000549686 KRTAP10-11P60412 298 aa12.8□□□□□ -0.36
LETMD1-220ENST00000549686 SPINK13Q1W4C9 94 aa12.8□□□□□ -0.36
LETMD1-220ENST00000549686 C20orf144Q9BQM9 153 aa12.8□□□□□ -0.36
LETMD1-220ENST00000549686 C1QTNF4Q9BXJ3 329 aa12.8□□□□□ -0.36
LETMD1-220ENST00000549686 TMEM242Q9NWH2 141 aa12.8□□□□□ -0.36
LETMD1-220ENST00000549686 SH2D1AO60880 128 aa12.79□□□□□ -0.36
LETMD1-220ENST00000549686 RNASE4P34096 147 aaKnown RBP12.79□□□□□ -0.36
LETMD1-220ENST00000549686 CRIP1P50238 77 aa12.79□□□□□ -0.36
LETMD1-220ENST00000549686 ZNF80P51504 273 aaPredicted RBP12.79□□□□□ -0.36
LETMD1-220ENST00000549686 RNF212Q495C1 297 aa12.79□□□□□ -0.36
LETMD1-220ENST00000549686 CT83Q5H943 113 aa12.79□□□□□ -0.36
LETMD1-220ENST00000549686 KPRPQ5T749 579 aaPredicted RBP12.79□□□□□ -0.36
LETMD1-220ENST00000549686 NUDT10Q8NFP7 164 aa12.79□□□□□ -0.36
LETMD1-220ENST00000549686 NUDT11Q96G61 164 aa12.79□□□□□ -0.36
LETMD1-220ENST00000549686 TUBA4BQ9H853 241 aa12.79□□□□□ -0.36
LETMD1-220ENST00000549686 H7BYZ3 331 aa12.78□□□□□ -0.36
LETMD1-220ENST00000549686 M0R2Z0 102 aa12.78□□□□□ -0.36
LETMD1-220ENST00000549686 GATCO43716 136 aaKnown RBP12.78□□□□□ -0.36
LETMD1-220ENST00000549686 INSP01308 110 aa12.78□□□□□ -0.36
LETMD1-220ENST00000549686 RPS20P60866 119 aaKnown RBP12.78□□□□□ -0.36
LETMD1-220ENST00000549686 BTN1A1Q13410 526 aa12.78□□□□□ -0.36
LETMD1-220ENST00000549686 PRR9Q5T870 116 aa12.78□□□□□ -0.36
LETMD1-220ENST00000549686 GFI1BQ5VTD9 330 aa12.78□□□□□ -0.36
LETMD1-220ENST00000549686 LINC00322Q6ZN03 302 aaPredicted RBP12.78□□□□□ -0.36
LETMD1-220ENST00000549686 RNASE7Q9H1E1 156 aaKnown RBP12.78□□□□□ -0.36
LETMD1-220ENST00000549686 RPP21Q9H633 154 aaKnown RBP12.78□□□□□ -0.36
LETMD1-220ENST00000549686 RPS10P5Q9NQ39 176 aa12.78□□□□□ -0.36
LETMD1-220ENST00000549686 LOC102724200A0A096LPH7 203 aaPredicted RBP12.77□□□□□ -0.37
LETMD1-220ENST00000549686 KIR2DL5BA0A0G2JN68 375 aa12.77□□□□□ -0.37
LETMD1-220ENST00000549686 KIR2DL5BA0A0G2JPC4 375 aa12.77□□□□□ -0.37
LETMD1-220ENST00000549686 XKRY2A2RUG3 117 aa12.77□□□□□ -0.37
LETMD1-220ENST00000549686 ZNF705GA8MUZ8 300 aaPredicted RBP12.77□□□□□ -0.37
LETMD1-220ENST00000549686 A8MZ25 164 aa12.77□□□□□ -0.37
LETMD1-220ENST00000549686 J3KRW8 73 aa12.77□□□□□ -0.37
LETMD1-220ENST00000549686 KIR2DL5AQ8N109 375 aa12.77□□□□□ -0.37
LETMD1-220ENST00000549686 KIR2DL5BQ8NHK3 375 aa12.77□□□□□ -0.37
LETMD1-220ENST00000549686 CMYA5Q8N3K9 4069 aa12.77□□□□□ -0.37
LETMD1-220ENST00000549686 CRXO43186 299 aaPredicted RBP12.76□□□□□ -0.37
LETMD1-220ENST00000549686 RPL35AP18077 110 aaKnown RBP12.76□□□□□ -0.37
LETMD1-220ENST00000549686 APOC4P55056 127 aa12.76□□□□□ -0.37
LETMD1-220ENST00000549686 LINC01559Q495D7 138 aa12.76□□□□□ -0.37
LETMD1-220ENST00000549686 CSTL1Q9H114 145 aa12.76□□□□□ -0.37
LETMD1-220ENST00000549686 V9GYV3 84 aa12.76□□□□□ -0.37
LETMD1-220ENST00000549686 TRAV12-2A0A075B6T6 113 aa12.75□□□□□ -0.37
LETMD1-220ENST00000549686 TRAV12-3A0A0B4J271 114 aa12.75□□□□□ -0.37
LETMD1-220ENST00000549686 TMEM189A5PLL7 270 aa12.75□□□□□ -0.37
LETMD1-220ENST00000549686 CXorf65A6NEN9 183 aa12.75□□□□□ -0.37
LETMD1-220ENST00000549686 ZNF324O75467 553 aaPredicted RBP12.75□□□□□ -0.37
LETMD1-220ENST00000549686 FXYD7P58549 80 aa12.75□□□□□ -0.37
LETMD1-220ENST00000549686 TMEM256Q8N2U0 113 aa12.75□□□□□ -0.37
LETMD1-220ENST00000549686 OR2D3Q8NGH3 330 aa12.75□□□□□ -0.37
LETMD1-220ENST00000549686 KCNS1Q96KK3 526 aa12.75□□□□□ -0.37
LETMD1-220ENST00000549686 IMMP2LQ96T52 175 aa12.75□□□□□ -0.37
LETMD1-220ENST00000549686 FAM231BA6NCW3 169 aa12.74□□□□□ -0.37
LETMD1-220ENST00000549686 A8MWL6 223 aa12.74□□□□□ -0.37
LETMD1-220ENST00000549686 UBE2CO00762 179 aa12.74□□□□□ -0.37
LETMD1-220ENST00000549686 ORM1P02763 201 aa12.74□□□□□ -0.37
LETMD1-220ENST00000549686 CXCL1P09341 107 aa12.74□□□□□ -0.37
LETMD1-220ENST00000549686 IGHV4-30-4P0DP06 118 aa12.74□□□□□ -0.37
LETMD1-220ENST00000549686 KIR3DS1Q14943 382 aa12.74□□□□□ -0.37
LETMD1-220ENST00000549686 ATRAIDQ6UW56 229 aa12.74□□□□□ -0.37
LETMD1-220ENST00000549686 FAM159AQ6UWV7 190 aa12.74□□□□□ -0.37
LETMD1-220ENST00000549686 TDRG1Q3Y452 100 aa12.73□□□□□ -0.37
LETMD1-220ENST00000549686 TSKUQ8WUA8 353 aa12.73□□□□□ -0.37
LETMD1-220ENST00000549686 PYGO2Q9BRQ0 406 aa12.73□□□□□ -0.37
LETMD1-220ENST00000549686 LINC00467Q9BRT7 94 aa12.73□□□□□ -0.37
LETMD1-220ENST00000549686 GFRA4Q9GZZ7 299 aa12.73□□□□□ -0.37
LETMD1-220ENST00000549686 IL36BQ9NZH7 164 aa12.73□□□□□ -0.37
LETMD1-220ENST00000549686 XCL2Q9UBD3 114 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms