RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 C11orf21Q9P2W6 132 aa7.6□□□□□ -1.19
SMARCD1-205ENST00000548573 A0A087WX48 190 aa7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 TRGV3P03979 118 aa7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 TMEM78Q5T7P6 136 aa7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 C11orf71Q6IPW1 123 aa7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 C9orf47Q6ZRZ4 202 aa7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 TTTY13Q9BZ97 58 aa7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 CNOT1A5YKK6 2376 aaKnown RBP7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 DCHS1Q96JQ0 3298 aa7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 TRAV8-2A0A0B4J237 113 aa7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 TRAV40A0A0B4J280 105 aa7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 RIPPLY3P57055 190 aa7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 TMEM160Q9NX00 188 aa7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 MRPL35Q9NZE8 188 aaKnown RBP7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 SELENOKQ9Y6D0 94 aa7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 PCNX1Q96RV3 2341 aa7.59□□□□□ -1.19
SMARCD1-205ENST00000548573 PLNP26678 52 aa7.58□□□□□ -1.2
SMARCD1-205ENST00000548573 CCDC140Q96MF4 163 aa7.58□□□□□ -1.2
SMARCD1-205ENST00000548573 SIRPDQ9H106 197 aa7.58□□□□□ -1.2
SMARCD1-205ENST00000548573 CEP250Q9BV73 2442 aa7.58□□□□□ -1.2
SMARCD1-205ENST00000548573 E9PLD3 99 aa7.58□□□□□ -1.2
SMARCD1-205ENST00000548573 ATP6V0E1O15342 81 aa7.58□□□□□ -1.2
SMARCD1-205ENST00000548573 ECSCRQ19T08 205 aa7.58□□□□□ -1.2
SMARCD1-205ENST00000548573 C8orf86Q6ZUL3 223 aa7.58□□□□□ -1.2
SMARCD1-205ENST00000548573 EEF1AKMT3Q96AZ1 226 aa7.58□□□□□ -1.2
SMARCD1-205ENST00000548573 MRAP2Q96G30 205 aa7.58□□□□□ -1.2
SMARCD1-205ENST00000548573 METTL26Q96S19 204 aa7.58□□□□□ -1.2
SMARCD1-205ENST00000548573 NHP2Q9NX24 153 aaKnown RBP7.58□□□□□ -1.2
SMARCD1-205ENST00000548573 U3KQE9 123 aa7.58□□□□□ -1.2
SMARCD1-205ENST00000548573 POLEQ07864 2286 aa7.58□□□□□ -1.2
SMARCD1-205ENST00000548573 APC2O95996 2303 aa7.57□□□□□ -1.2
SMARCD1-205ENST00000548573 TRBV7-1A0A0A6YYK4 115 aa7.57□□□□□ -1.2
SMARCD1-205ENST00000548573 TRAV12-1A0A0B4J245 112 aa7.57□□□□□ -1.2
SMARCD1-205ENST00000548573 K7ENP7 123 aa7.57□□□□□ -1.2
SMARCD1-205ENST00000548573 TCF15Q12870 199 aa7.57□□□□□ -1.2
SMARCD1-205ENST00000548573 CLEC19AQ6UXS0 136 aa7.57□□□□□ -1.2
SMARCD1-205ENST00000548573 LENEPQ9Y5L5 61 aa7.57□□□□□ -1.2
SMARCD1-205ENST00000548573 ZNF318Q5VUA4 2279 aa7.57□□□□□ -1.2
SMARCD1-205ENST00000548573 ARHGAP32A7KAX9 2087 aa7.57□□□□□ -1.2
SMARCD1-205ENST00000548573 IGHV3-66A0A0C4DH42 116 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 LINC01619G3V211 115 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 K7ERJ3 54 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 ZFP36P26651 326 aaKnown RBP7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 SPANXN1Q5VSR9 72 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 MAPKAPK5-AS1Q8N8E1 139 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 UFC1Q9Y3C8 167 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 TRAV26-2A0A0B4J265 109 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 TMEM238C9JI98 176 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 F8VRH5 84 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 F8W1H4 67 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 H7C1H1 209 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 CCL21O00585 134 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 UBE2E1P51965 193 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 ATP6V0BQ99437 205 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 SMIM2Q9BVW6 85 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 AKAP13Q12802 2813 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 ATMQ13315 3056 aa7.56□□□□□ -1.2
SMARCD1-205ENST00000548573 IGLL5B9A064 214 aa7.55□□□□□ -1.2
SMARCD1-205ENST00000548573 K7EMI3 77 aa7.55□□□□□ -1.2
SMARCD1-205ENST00000548573 SLC25A16P16260 332 aa7.55□□□□□ -1.2
SMARCD1-205ENST00000548573 ORMDL2Q53FV1 153 aa7.55□□□□□ -1.2
SMARCD1-205ENST00000548573 FOXI2Q6ZQN5 318 aa7.55□□□□□ -1.2
SMARCD1-205ENST00000548573 AJUBAQ96IF1 538 aa7.55□□□□□ -1.2
SMARCD1-205ENST00000548573 IGHV3OR16-13A0A075B7E8 117 aa7.55□□□□□ -1.2
SMARCD1-205ENST00000548573 IGHV3-74A0A0B4J1X5 117 aa7.55□□□□□ -1.2
SMARCD1-205ENST00000548573 TEX48A0A1B0GUV7 120 aa7.55□□□□□ -1.2
SMARCD1-205ENST00000548573 EFNA4P52798 201 aa7.55□□□□□ -1.2
SMARCD1-205ENST00000548573 C12orf74Q32Q52 190 aa7.55□□□□□ -1.2
SMARCD1-205ENST00000548573 ZNF479Q96JC4 524 aa7.55□□□□□ -1.2
SMARCD1-205ENST00000548573 ANKRD11Q6UB99 2663 aaPredicted RBP7.54□□□□□ -1.2
SMARCD1-205ENST00000548573 CENPVL3A0A0U1RRI6 287 aa7.54□□□□□ -1.2
SMARCD1-205ENST00000548573 G3V318 75 aa7.54□□□□□ -1.2
SMARCD1-205ENST00000548573 H3BVH4 76 aa7.54□□□□□ -1.2
SMARCD1-205ENST00000548573 RPL24P83731 157 aaKnown RBP7.54□□□□□ -1.2
SMARCD1-205ENST00000548573 C9orf139Q6ZV77 190 aa7.54□□□□□ -1.2
SMARCD1-205ENST00000548573 TOMM6Q96B49 74 aa7.54□□□□□ -1.2
SMARCD1-205ENST00000548573 C20orf78Q9BR46 151 aa7.54□□□□□ -1.2
SMARCD1-205ENST00000548573 TRBV7-3A0A075B6L6 115 aa7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 A0A1B0GWB2 263 aa7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 ADORA2A-AS1P86434 159 aa7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 CDSNQ15517 529 aa7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 GLMPQ8WWB7 406 aa7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 ITLN2Q8WWU7 325 aaPredicted RBP7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 C16orf92Q96LL3 132 aa7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 HIST1H4GQ99525 98 aa7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 MAP1BP46821 2468 aaKnown RBP7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 IGHV3-49A0A0A0MS15 119 aa7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 ZNF207O43670 478 aaKnown RBP7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 SAA4P35542 130 aa7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 SUMO2P61956 95 aaKnown RBP7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 ATP5G2Q06055 141 aa7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 PRR9Q5T870 116 aa7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 Q6ZQT7 251 aa7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 NEXN-AS1Q8NBZ9 246 aa7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 LINC00477Q96M19 166 aa7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 CHTOPQ9Y3Y2 248 aaKnown RBP7.53□□□□□ -1.2
SMARCD1-205ENST00000548573 ACACAQ13085 2346 aa7.52□□□□□ -1.2
SMARCD1-205ENST00000548573 MYMXA0A1B0GTQ4 84 aa7.52□□□□□ -1.21
SMARCD1-205ENST00000548573 LINC01548A6NM66 108 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms