RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 DKK2Q9UBU2 259 aa10.36□□□□□ -0.75
DDX54-203ENST00000546869 PSG8Q9UQ74 426 aa10.36□□□□□ -0.75
DDX54-203ENST00000546869 TRAV8-1A0A0A6YYK1 113 aa10.35□□□□□ -0.75
DDX54-203ENST00000546869 NUPR2A6NF83 97 aa10.35□□□□□ -0.75
DDX54-203ENST00000546869 LYRM9A8MSI8 78 aa10.35□□□□□ -0.75
DDX54-203ENST00000546869 J3KRW8 73 aa10.35□□□□□ -0.75
DDX54-203ENST00000546869 PAGE4O60829 102 aa10.35□□□□□ -0.75
DDX54-203ENST00000546869 NANOS2P60321 138 aaKnown RBP10.35□□□□□ -0.75
DDX54-203ENST00000546869 FLI1Q01543 452 aaPredicted RBP10.35□□□□□ -0.75
DDX54-203ENST00000546869 BTN1A1Q13410 526 aa10.35□□□□□ -0.75
DDX54-203ENST00000546869 TVP23CQ96ET8 276 aa10.35□□□□□ -0.75
DDX54-203ENST00000546869 TXNDC17Q9BRA2 123 aa10.35□□□□□ -0.75
DDX54-203ENST00000546869 NDFIP1Q9BT67 221 aa10.35□□□□□ -0.75
DDX54-203ENST00000546869 KLF12Q9Y4X4 402 aa10.35□□□□□ -0.75
DDX54-203ENST00000546869 TRBV6-1A0A0K0K1D8 114 aa10.34□□□□□ -0.75
DDX54-203ENST00000546869 PEX7O00628 323 aa10.34□□□□□ -0.75
DDX54-203ENST00000546869 PRM2P04554 102 aa10.34□□□□□ -0.75
DDX54-203ENST00000546869 CCL20P78556 96 aa10.34□□□□□ -0.75
DDX54-203ENST00000546869 C12orf74Q32Q52 190 aa10.34□□□□□ -0.75
DDX54-203ENST00000546869 FAM222AQ5U5X8 452 aa10.34□□□□□ -0.75
DDX54-203ENST00000546869 CST9LP1Q5W188 147 aa10.34□□□□□ -0.75
DDX54-203ENST00000546869 CEMP1Q6PRD7 247 aaPredicted RBP10.34□□□□□ -0.75
DDX54-203ENST00000546869 EIF4E3Q8N5X7 224 aaKnown RBP10.34□□□□□ -0.75
DDX54-203ENST00000546869 TREM1Q9NP99 234 aa10.34□□□□□ -0.75
DDX54-203ENST00000546869 MANBALQ9NQG1 85 aa10.34□□□□□ -0.75
DDX54-203ENST00000546869 CELA1Q9UNI1 258 aa10.34□□□□□ -0.75
DDX54-203ENST00000546869 IGHV1OR15-1A0A075B7D0 117 aa10.33□□□□□ -0.76
DDX54-203ENST00000546869 HTN1P15515 57 aa10.33□□□□□ -0.76
DDX54-203ENST00000546869 EMP1P54849 157 aa10.33□□□□□ -0.76
DDX54-203ENST00000546869 BLOC1S1P78537 153 aa10.33□□□□□ -0.76
DDX54-203ENST00000546869 TDRG1Q3Y452 100 aa10.33□□□□□ -0.76
DDX54-203ENST00000546869 ZFAND6Q6FIF0 208 aa10.33□□□□□ -0.76
DDX54-203ENST00000546869 COX8CQ7Z4L0 72 aa10.33□□□□□ -0.76
DDX54-203ENST00000546869 ZNF680Q8NEM1 530 aa10.33□□□□□ -0.76
DDX54-203ENST00000546869 PHLDA1Q8WV24 401 aaPredicted RBP10.33□□□□□ -0.76
DDX54-203ENST00000546869 BOLA1Q9Y3E2 137 aa10.33□□□□□ -0.76
DDX54-203ENST00000546869 TIMM8BQ9Y5J9 83 aaPredicted RBP10.33□□□□□ -0.76
DDX54-203ENST00000546869 TRAV21A0A0B4J279 112 aa10.32□□□□□ -0.76
DDX54-203ENST00000546869 S100A9P06702 114 aaKnown RBP10.32□□□□□ -0.76
DDX54-203ENST00000546869 ATP5G3P48201 142 aa10.32□□□□□ -0.76
DDX54-203ENST00000546869 IBA57Q5T440 356 aaKnown RBP10.32□□□□□ -0.76
DDX54-203ENST00000546869 ALKAL2Q6UX46 152 aa10.32□□□□□ -0.76
DDX54-203ENST00000546869 LYPD6BQ8NI32 183 aa10.32□□□□□ -0.76
DDX54-203ENST00000546869 FMC1Q96HJ9 113 aa10.32□□□□□ -0.76
DDX54-203ENST00000546869 SGK494Q96LW2 274 aa10.32□□□□□ -0.76
DDX54-203ENST00000546869 LINC00479Q96M42 142 aa10.32□□□□□ -0.76
DDX54-203ENST00000546869 TP53TG3Q9ULZ0 132 aa10.32□□□□□ -0.76
DDX54-203ENST00000546869 ZFP30Q9Y2G7 519 aa10.32□□□□□ -0.76
DDX54-203ENST00000546869 TRAV10A0A0B4J240 114 aa10.31□□□□□ -0.76
DDX54-203ENST00000546869 A0A1B0GV50 99 aa10.31□□□□□ -0.76
DDX54-203ENST00000546869 RGS13O14921 159 aa10.31□□□□□ -0.76
DDX54-203ENST00000546869 TAGLN2P37802 199 aaKnown RBP10.31□□□□□ -0.76
DDX54-203ENST00000546869 DAZ2Q13117 558 aaKnown RBP10.31□□□□□ -0.76
DDX54-203ENST00000546869 TMEM183BQ1AE95 376 aa10.31□□□□□ -0.76
DDX54-203ENST00000546869 Q6ZTC4 211 aa10.31□□□□□ -0.76
DDX54-203ENST00000546869 PRNTQ86SH4 94 aa10.31□□□□□ -0.76
DDX54-203ENST00000546869 C11orf72Q8NBR9 251 aa10.31□□□□□ -0.76
DDX54-203ENST00000546869 KLK5Q9Y337 293 aaPredicted RBP10.31□□□□□ -0.76
DDX54-203ENST00000546869 CSMD3Q7Z407 3707 aa10.3□□□□□ -0.76
DDX54-203ENST00000546869 IFNA1P01562 189 aa10.3□□□□□ -0.76
DDX54-203ENST00000546869 TCTAP57738 103 aa10.3□□□□□ -0.76
DDX54-203ENST00000546869 SMUG1Q53HV7 270 aa10.3□□□□□ -0.76
DDX54-203ENST00000546869 Q6ZQT7 251 aa10.3□□□□□ -0.76
DDX54-203ENST00000546869 LINC00612Q8N6U2 182 aa10.3□□□□□ -0.76
DDX54-203ENST00000546869 C2CD4CQ8TF44 421 aa10.3□□□□□ -0.76
DDX54-203ENST00000546869 GNG13Q9P2W3 67 aa10.3□□□□□ -0.76
DDX54-203ENST00000546869 TRAV34A0A0B4J273 112 aa10.29□□□□□ -0.76
DDX54-203ENST00000546869 CBY3A6NI87 242 aa10.29□□□□□ -0.76
DDX54-203ENST00000546869 SNURFLB1AK76 121 aa10.29□□□□□ -0.76
DDX54-203ENST00000546869 LTAP01374 205 aa10.29□□□□□ -0.76
DDX54-203ENST00000546869 PFN1P07737 140 aaKnown RBP10.29□□□□□ -0.76
DDX54-203ENST00000546869 DAD1P61803 113 aa10.29□□□□□ -0.76
DDX54-203ENST00000546869 UBE2G1P62253 170 aa10.29□□□□□ -0.76
DDX54-203ENST00000546869 FAM159AQ6UWV7 190 aa10.29□□□□□ -0.76
DDX54-203ENST00000546869 Q86TA4 180 aa10.29□□□□□ -0.76
DDX54-203ENST00000546869 KCNS1Q96KK3 526 aa10.29□□□□□ -0.76
DDX54-203ENST00000546869 C8orf49Q96NF6 230 aa10.29□□□□□ -0.76
DDX54-203ENST00000546869 GCGP01275 180 aa10.28□□□□□ -0.76
DDX54-203ENST00000546869 AKR1C3P42330 323 aa10.28□□□□□ -0.76
DDX54-203ENST00000546869 TCL1AP56279 114 aa10.28□□□□□ -0.76
DDX54-203ENST00000546869 C11orf52Q96A22 123 aa10.28□□□□□ -0.76
DDX54-203ENST00000546869 C18orf15Q96N68 181 aa10.28□□□□□ -0.76
DDX54-203ENST00000546869 NOP10Q9NPE3 64 aaKnown RBP10.28□□□□□ -0.76
DDX54-203ENST00000546869 TRGV11A0A075B6L2 103 aa10.27□□□□□ -0.77
DDX54-203ENST00000546869 DEFB131BA0A096LNP1 70 aa10.27□□□□□ -0.77
DDX54-203ENST00000546869 FABP5P3A8MUU1 101 aa10.27□□□□□ -0.77
DDX54-203ENST00000546869 PDE6DO43924 150 aa10.27□□□□□ -0.77
DDX54-203ENST00000546869 BCL2P10415 239 aa10.27□□□□□ -0.77
DDX54-203ENST00000546869 ZNF80P51504 273 aaPredicted RBP10.27□□□□□ -0.77
DDX54-203ENST00000546869 MEF2BQ02080 365 aaPredicted RBP10.27□□□□□ -0.77
DDX54-203ENST00000546869 LGALS9BQ3B8N2 356 aa10.27□□□□□ -0.77
DDX54-203ENST00000546869 FAM210BQ96KR6 192 aa10.27□□□□□ -0.77
DDX54-203ENST00000546869 GSN-AS1Q9NRJ2 163 aa10.27□□□□□ -0.77
DDX54-203ENST00000546869 VAX2Q9UIW0 290 aa10.27□□□□□ -0.77
DDX54-203ENST00000546869 SCO2A0A1W2PP80 73 aa10.26□□□□□ -0.77
DDX54-203ENST00000546869 SPINK4O60575 86 aa10.26□□□□□ -0.77
DDX54-203ENST00000546869 MUC21Q5SSG8 566 aa10.26□□□□□ -0.77
DDX54-203ENST00000546869 TEX261Q6UWH6 196 aa10.26□□□□□ -0.77
DDX54-203ENST00000546869 ZNF767PQ75MW2 155 aa10.26□□□□□ -0.77
DDX54-203ENST00000546869 TMEM183AQ8IXX5 376 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms